RNA–Protein interactions for RNA: ENST00000419774.5

PCGF3-203, Transcript of polycomb group ring finger 3, humanhuman

TSL 5

Gene PCGF3, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-203ENST00000419774 GPBP1L1Q9HC44 474 aaPredicted RBP23.32■■□□□ 1.32
PCGF3-203ENST00000419774 WWC3Q9ULE0 1092 aa23.32■■□□□ 1.32
PCGF3-203ENST00000419774 ZNF831Q5JPB2 1677 aa23.31■■□□□ 1.32
PCGF3-203ENST00000419774 KDRP35968 1356 aa23.3■■□□□ 1.32
PCGF3-203ENST00000419774 POLR3GLQ9BT43 218 aa23.3■■□□□ 1.32
PCGF3-203ENST00000419774 KIF13BQ9NQT8 1826 aa23.3■■□□□ 1.32
PCGF3-203ENST00000419774 ERVV-2B6SEH9 535 aa23.28■■□□□ 1.32
PCGF3-203ENST00000419774 MMP10P09238 476 aa23.28■■□□□ 1.32
PCGF3-203ENST00000419774 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
PCGF3-203ENST00000419774 SLC4A9Q96Q91 983 aa23.27■■□□□ 1.32
PCGF3-203ENST00000419774 COL5A3P25940 1745 aaPredicted RBP23.27■■□□□ 1.32
PCGF3-203ENST00000419774 KIAA1551Q9HCM1 1747 aa23.26■■□□□ 1.31
PCGF3-203ENST00000419774 MYH14Q7Z406 1995 aaKnown RBP23.26■■□□□ 1.31
PCGF3-203ENST00000419774 N4BP2Q86UW6 1770 aaPredicted RBP23.25■■□□□ 1.31
PCGF3-203ENST00000419774 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
PCGF3-203ENST00000419774 TRAPPC3LQ5T215 181 aa23.25■■□□□ 1.31
PCGF3-203ENST00000419774 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
PCGF3-203ENST00000419774 RTCBQ9Y3I0 505 aaKnown RBP23.25■■□□□ 1.31
PCGF3-203ENST00000419774 CICQ96RK0 1608 aaPredicted RBP23.25■■□□□ 1.31
PCGF3-203ENST00000419774 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
PCGF3-203ENST00000419774 PLEKHO1Q53GL0 409 aaPredicted RBP23.24■■□□□ 1.31
PCGF3-203ENST00000419774 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
PCGF3-203ENST00000419774 RC3H1Q5TC82 1133 aaKnown RBP23.23■■□□□ 1.31
PCGF3-203ENST00000419774 NLGN1Q8N2Q7 840 aa23.23■■□□□ 1.31
PCGF3-203ENST00000419774 RBM42Q9BTD8 480 aaKnown RBP23.23■■□□□ 1.31
PCGF3-203ENST00000419774 KDM6AO15550 1401 aaPredicted RBP23.23■■□□□ 1.31
PCGF3-203ENST00000419774 ADRA2BP18089 450 aa23.22■■□□□ 1.31
PCGF3-203ENST00000419774 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
PCGF3-203ENST00000419774 PANK3Q9H999 370 aa23.22■■□□□ 1.31
PCGF3-203ENST00000419774 CNTNAP4Q9C0A0 1308 aa23.22■■□□□ 1.31
PCGF3-203ENST00000419774 ARHGEF1Q92888 912 aaKnown RBP23.21■■□□□ 1.31
PCGF3-203ENST00000419774 C10orf71Q711Q0 1435 aa23.2■■□□□ 1.3
PCGF3-203ENST00000419774 TGFB2P61812 414 aa23.2■■□□□ 1.3
PCGF3-203ENST00000419774 AMOTQ4VCS5 1084 aa23.2■■□□□ 1.3
PCGF3-203ENST00000419774 C4AP0C0L4 1744 aa23.19■■□□□ 1.3
PCGF3-203ENST00000419774 RPS6KA4O75676 772 aa23.19■■□□□ 1.3
PCGF3-203ENST00000419774 HSPA6P17066 643 aa23.19■■□□□ 1.3
PCGF3-203ENST00000419774 CABP4P57796 275 aa23.19■■□□□ 1.3
PCGF3-203ENST00000419774 BRCA1P38398 1863 aaKnown RBP23.19■■□□□ 1.3
PCGF3-203ENST00000419774 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
PCGF3-203ENST00000419774 GYS1P13807 737 aa23.18■■□□□ 1.3
PCGF3-203ENST00000419774 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.33e-6■■■■■ 28.1
PCGF3-203ENST00000419774 HSPA5P11021 654 aaKnown RBP23.17■■□□□ 1.3
PCGF3-203ENST00000419774 RFC4P35249 363 aa23.17■■□□□ 1.3
PCGF3-203ENST00000419774 AEBP1Q8IUX7 1158 aa23.17■■□□□ 1.3
PCGF3-203ENST00000419774 KIF3CO14782 793 aa23.16■■□□□ 1.3
PCGF3-203ENST00000419774 MTHFSP49914 203 aa23.16■■□□□ 1.3
PCGF3-203ENST00000419774 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
PCGF3-203ENST00000419774 CCDC87Q9NVE4 849 aa23.16■■□□□ 1.3
PCGF3-203ENST00000419774 BCS1LQ9Y276 419 aa23.16■■□□□ 1.3
PCGF3-203ENST00000419774 MORC1Q86VD1 984 aa23.15■■□□□ 1.3
PCGF3-203ENST00000419774 DPEP1P16444 411 aa23.14■■□□□ 1.29
PCGF3-203ENST00000419774 C1orf141Q5JVX7 400 aa23.14■■□□□ 1.29
PCGF3-203ENST00000419774 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
PCGF3-203ENST00000419774 PTCD1O75127 700 aaKnown RBP23.13■■□□□ 1.29
PCGF3-203ENST00000419774 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
PCGF3-203ENST00000419774 PARP3Q9Y6F1 533 aa23.13■■□□□ 1.29
PCGF3-203ENST00000419774 ARFGEF1Q9Y6D6 1849 aa23.12■■□□□ 1.29
PCGF3-203ENST00000419774 TJP1Q07157 1748 aa23.12■■□□□ 1.29
PCGF3-203ENST00000419774 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
PCGF3-203ENST00000419774 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
PCGF3-203ENST00000419774 CRKLP46109 303 aaKnown RBP23.11■■□□□ 1.29
PCGF3-203ENST00000419774 ARHGAP27Q6ZUM4 889 aa23.11■■□□□ 1.29
PCGF3-203ENST00000419774 FCHSD2O94868 740 aa23.09■■□□□ 1.29
PCGF3-203ENST00000419774 KCNA3P22001 575 aa23.09■■□□□ 1.29
PCGF3-203ENST00000419774 IL13P35225 146 aa23.09■■□□□ 1.29
PCGF3-203ENST00000419774 SRP68Q9UHB9 627 aaKnown RBP23.08■■□□□ 1.29
PCGF3-203ENST00000419774 USP42Q9H9J4 1324 aaKnown RBP23.08■■□□□ 1.28
PCGF3-203ENST00000419774 FKBP8Q14318 412 aa23.07■■□□□ 1.28
PCGF3-203ENST00000419774 KNSTRNQ9Y448 316 aa23.07■■□□□ 1.28
PCGF3-203ENST00000419774 VIRMAQ69YN4 1812 aaKnown RBP23.07■■□□□ 1.28
PCGF3-203ENST00000419774 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
PCGF3-203ENST00000419774 DDR1Q08345 913 aa23.06■■□□□ 1.28
PCGF3-203ENST00000419774 INTS5Q6P9B9 1019 aaKnown RBP23.05■■□□□ 1.28
PCGF3-203ENST00000419774 TOMM70O94826 608 aa23.04■■□□□ 1.28
PCGF3-203ENST00000419774 PIM2Q9P1W9 311 aa23.04■■□□□ 1.28
PCGF3-203ENST00000419774 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
PCGF3-203ENST00000419774 NMRK2Q9NPI5 230 aa23.03■■□□□ 1.28
PCGF3-203ENST00000419774 APLP1P51693 650 aa23.02■■□□□ 1.28
PCGF3-203ENST00000419774 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
PCGF3-203ENST00000419774 C9orf131Q5VYM1 1079 aa23.02■■□□□ 1.28
PCGF3-203ENST00000419774 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
PCGF3-203ENST00000419774 SBF1O95248 1867 aa23.01■■□□□ 1.27
PCGF3-203ENST00000419774 DALRD3Q5D0E6 543 aaKnown RBP23.01■■□□□ 1.27
PCGF3-203ENST00000419774 DNAJC10Q8IXB1 793 aa23.01■■□□□ 1.27
PCGF3-203ENST00000419774 MRC1P22897 1456 aa23■■□□□ 1.27
PCGF3-203ENST00000419774 POLRMTO00411 1230 aaKnown RBP23■■□□□ 1.27
PCGF3-203ENST00000419774 TM4SF1P30408 202 aa23■■□□□ 1.27
PCGF3-203ENST00000419774 LGR6Q9HBX8 967 aa23■■□□□ 1.27
PCGF3-203ENST00000419774 SOS1Q07889 1333 aaPredicted RBP22.99■■□□□ 1.27
PCGF3-203ENST00000419774 AFDNP55196 1824 aaKnown RBP22.98■■□□□ 1.27
PCGF3-203ENST00000419774 ZPR1O75312 459 aa22.98■■□□□ 1.27
PCGF3-203ENST00000419774 CHRNA5P30532 468 aa22.98■■□□□ 1.27
PCGF3-203ENST00000419774 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
PCGF3-203ENST00000419774 CYP19A1P11511 503 aaPredicted RBP22.97■■□□□ 1.27
PCGF3-203ENST00000419774 USPL1Q5W0Q7 1092 aa22.97■■□□□ 1.27
PCGF3-203ENST00000419774 KCPQ6ZWJ8 1503 aa22.97■■□□□ 1.27
PCGF3-203ENST00000419774 HMOX1P09601 288 aa22.96■■□□□ 1.27
PCGF3-203ENST00000419774 SLC39A6Q13433 755 aa22.96■■□□□ 1.27
PCGF3-203ENST00000419774 DNAJC5GQ8N7S2 189 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms