RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 SPATA31A3Q5VYP0 1347 aa10.36□□□□□ -0.75
COL12A1-204ENST00000419671 ADAMTS7Q9UKP4 1686 aa10.36□□□□□ -0.75
COL12A1-204ENST00000419671 CEMIPQ8WUJ3 1361 aa10.35□□□□□ -0.75
COL12A1-204ENST00000419671 PDIA4P13667 645 aaKnown RBP10.35□□□□□ -0.75
COL12A1-204ENST00000419671 ZC3H6P61129 1189 aaKnown RBP10.35□□□□□ -0.75
COL12A1-204ENST00000419671 ERBB3P21860 1342 aa10.35□□□□□ -0.75
COL12A1-204ENST00000419671 ABCC6O95255 1503 aa10.35□□□□□ -0.75
COL12A1-204ENST00000419671 SCN11AQ9UI33 1791 aa10.35□□□□□ -0.75
COL12A1-204ENST00000419671 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
COL12A1-204ENST00000419671 ZBTB40Q9NUA8 1239 aa10.35□□□□□ -0.75
COL12A1-204ENST00000419671 TSPYL4Q9UJ04 414 aa10.35□□□□□ -0.75
COL12A1-204ENST00000419671 ABCC4O15439 1325 aa10.34□□□□□ -0.75
COL12A1-204ENST00000419671 N4BP2Q86UW6 1770 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-204ENST00000419671 RGS12O14924 1447 aa10.34□□□□□ -0.75
COL12A1-204ENST00000419671 SLAIN2Q9P270 581 aa10.33□□□□□ -0.76
COL12A1-204ENST00000419671 PDE4AP27815 886 aa10.33□□□□□ -0.76
COL12A1-204ENST00000419671 BACH2Q9BYV9 841 aa10.33□□□□□ -0.76
COL12A1-204ENST00000419671 PKD1L3Q7Z443 1732 aa10.32□□□□□ -0.76
COL12A1-204ENST00000419671 ZBTB7BO15156 539 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-204ENST00000419671 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
COL12A1-204ENST00000419671 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-204ENST00000419671 TAF7Q15545 349 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-204ENST00000419671 LGR6Q9HBX8 967 aa10.31□□□□□ -0.76
COL12A1-204ENST00000419671 CPDO75976 1380 aa10.31□□□□□ -0.76
COL12A1-204ENST00000419671 RGS3P49796 1198 aa10.31□□□□□ -0.76
COL12A1-204ENST00000419671 HDAC1Q13547 482 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-204ENST00000419671 AMOTQ4VCS5 1084 aa10.31□□□□□ -0.76
COL12A1-204ENST00000419671 AKAP4Q5JQC9 854 aa10.31□□□□□ -0.76
COL12A1-204ENST00000419671 HOMEZQ8IX15 550 aa10.31□□□□□ -0.76
COL12A1-204ENST00000419671 API5Q9BZZ5 524 aaKnown RBP10.31□□□□□ -0.76
COL12A1-204ENST00000419671 RWDD1Q9H446 243 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-204ENST00000419671 BABAM1Q9NWV8 329 aa10.31□□□□□ -0.76
COL12A1-204ENST00000419671 OVOS2A0A0G2JMS6 1433 aa10.3□□□□□ -0.76
COL12A1-204ENST00000419671 CHRNA2Q15822 529 aa10.3□□□□□ -0.76
COL12A1-204ENST00000419671 PLEKHO1Q53GL0 409 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-204ENST00000419671 ZNF530Q6P9A1 599 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-204ENST00000419671 MEGF6O75095 1541 aa10.29□□□□□ -0.76
COL12A1-204ENST00000419671 PTPRCP08575 1304 aa10.29□□□□□ -0.76
COL12A1-204ENST00000419671 PARP4Q9UKK3 1724 aaKnown RBP10.29□□□□□ -0.76
COL12A1-204ENST00000419671 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
COL12A1-204ENST00000419671 MPRIPQ6WCQ1 1025 aa10.29□□□□□ -0.76
COL12A1-204ENST00000419671 PDZRN3Q9UPQ7 1066 aa10.29□□□□□ -0.76
COL12A1-204ENST00000419671 ROBO1Q9Y6N7 1651 aa10.28□□□□□ -0.76
COL12A1-204ENST00000419671 CAPN15O75808 1086 aa10.28□□□□□ -0.76
COL12A1-204ENST00000419671 PDE4CQ08493 712 aa10.28□□□□□ -0.76
COL12A1-204ENST00000419671 C8orf34Q49A92 452 aa10.28□□□□□ -0.76
COL12A1-204ENST00000419671 G2E3Q7L622 706 aa10.28□□□□□ -0.76
COL12A1-204ENST00000419671 SHANK3Q9BYB0 1731 aa10.28□□□□□ -0.76
COL12A1-204ENST00000419671 SOS1Q07889 1333 aaPredicted RBP10.27□□□□□ -0.76
COL12A1-204ENST00000419671 RNMTO43148 476 aaKnown RBP10.27□□□□□ -0.76
COL12A1-204ENST00000419671 SMC5Q8IY18 1101 aa10.27□□□□□ -0.76
COL12A1-204ENST00000419671 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.76
COL12A1-204ENST00000419671 NLRP2Q9NX02 1062 aa10.27□□□□□ -0.76
COL12A1-204ENST00000419671 C5P01031 1676 aa10.27□□□□□ -0.77
COL12A1-204ENST00000419671 C1orf141Q5JVX7 400 aa10.27□□□□□ -0.77
COL12A1-204ENST00000419671 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
COL12A1-204ENST00000419671 KCNQ3O43525 872 aa10.26□□□□□ -0.77
COL12A1-204ENST00000419671 EIF4A1P60842 406 aaKnown RBP10.26□□□□□ -0.77
COL12A1-204ENST00000419671 FAM161AQ3B820 660 aa10.26□□□□□ -0.77
COL12A1-204ENST00000419671 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
COL12A1-204ENST00000419671 SIRT2Q8IXJ6 389 aa10.26□□□□□ -0.77
COL12A1-204ENST00000419671 CHMP4BQ9H444 224 aaKnown RBP10.26□□□□□ -0.77
COL12A1-204ENST00000419671 COL5A2P05997 1499 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-204ENST00000419671 TEFQ10587 303 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 RAPGEF4Q8WZA2 1011 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 KDM6AO15550 1401 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-204ENST00000419671 ATP10DQ9P241 1426 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 PLEKHG2Q9H7P9 1386 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 LTBP4Q8N2S1 1624 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 BTBD11A6QL63 1104 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 STK31Q9BXU1 1019 aa10.25□□□□□ -0.77
COL12A1-204ENST00000419671 F6X3S4 739 aa10.24□□□□□ -0.77
COL12A1-204ENST00000419671 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
COL12A1-204ENST00000419671 MRC1P22897 1456 aa10.24□□□□□ -0.77
COL12A1-204ENST00000419671 TATP17735 454 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-204ENST00000419671 FLIIQ13045 1269 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 PRDM11Q9NQV5 511 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL12A1-204ENST00000419671 COL22A1Q8NFW1 1626 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-204ENST00000419671 HEG1Q9ULI3 1381 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 WDR17Q8IZU2 1322 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 AHDC1Q5TGY3 1603 aaPredicted RBP10.23□□□□□ -0.77
COL12A1-204ENST00000419671 HOXB7P09629 217 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 PHKG2P15735 406 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 NUCB1Q02818 461 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 MEIS3Q99687 375 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 PXDNLA1KZ92 1463 aa10.23□□□□□ -0.77
COL12A1-204ENST00000419671 ABCB7O75027 752 aa10.22□□□□□ -0.77
COL12A1-204ENST00000419671 SPG7Q9UQ90 795 aa10.22□□□□□ -0.77
COL12A1-204ENST00000419671 COL16A1Q07092 1604 aaPredicted RBP10.22□□□□□ -0.77
COL12A1-204ENST00000419671 CYP27B1O15528 508 aa10.21□□□□□ -0.77
COL12A1-204ENST00000419671 ANP32AP39687 249 aaKnown RBP10.21□□□□□ -0.77
COL12A1-204ENST00000419671 FKBP5Q13451 457 aaPredicted RBP10.21□□□□□ -0.77
COL12A1-204ENST00000419671 SLC4A10Q6U841 1118 aa10.21□□□□□ -0.77
COL12A1-204ENST00000419671 PHAXQ9H814 394 aaKnown RBP10.21□□□□□ -0.77
COL12A1-204ENST00000419671 UBR2Q8IWV8 1755 aa10.21□□□□□ -0.78
COL12A1-204ENST00000419671 GLI3P10071 1580 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms