RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 INSM2Q96T92 566 aaPredicted RBP9.6□□□□□ -0.87
VPS45-203ENST00000419023 VRTNQ9H8Y1 702 aa9.6□□□□□ -0.87
VPS45-203ENST00000419023 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.877e-8■■■■□ 21.3
VPS45-203ENST00000419023 EIF4G3O43432 1585 aaKnown RBP9.59□□□□□ -0.87
VPS45-203ENST00000419023 MEN1O00255 615 aa9.59□□□□□ -0.87
VPS45-203ENST00000419023 CLDN10P78369 228 aa9.59□□□□□ -0.87
VPS45-203ENST00000419023 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
VPS45-203ENST00000419023 POLMQ9NP87 494 aaPredicted RBP9.59□□□□□ -0.87
VPS45-203ENST00000419023 DNAAF2Q9NVR5 837 aaKnown RBP9.59□□□□□ -0.87
VPS45-203ENST00000419023 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.58□□□□□ -0.88
VPS45-203ENST00000419023 POTECB2RU33 542 aa9.58□□□□□ -0.88
VPS45-203ENST00000419023 RASA1P20936 1047 aa9.58□□□□□ -0.88
VPS45-203ENST00000419023 CTSOP43234 321 aaPredicted RBP9.58□□□□□ -0.88
VPS45-203ENST00000419023 ATP1A2P50993 1020 aa9.58□□□□□ -0.88
VPS45-203ENST00000419023 ETNK1Q9HBU6 452 aa9.58□□□□□ -0.88
VPS45-203ENST00000419023 SENP2Q9HC62 589 aa9.58□□□□□ -0.88
VPS45-203ENST00000419023 KIAA1024Q9UPX6 916 aa9.58□□□□□ -0.88
VPS45-203ENST00000419023 PRDM2Q13029 1718 aa9.57□□□□□ -0.88
VPS45-203ENST00000419023 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
VPS45-203ENST00000419023 IL2RAP01589 272 aa9.57□□□□□ -0.88
VPS45-203ENST00000419023 SCNN1DP51172 638 aa9.57□□□□□ -0.88
VPS45-203ENST00000419023 GDF10P55107 478 aa9.57□□□□□ -0.88
VPS45-203ENST00000419023 ZNF594Q96JF6 807 aaPredicted RBP9.57□□□□□ -0.88
VPS45-203ENST00000419023 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
VPS45-203ENST00000419023 CHD1O14646 1710 aa9.56□□□□□ -0.88
VPS45-203ENST00000419023 CLN3Q13286 438 aa9.56□□□□□ -0.88
VPS45-203ENST00000419023 ESCO1Q5FWF5 840 aa9.56□□□□□ -0.88
VPS45-203ENST00000419023 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
VPS45-203ENST00000419023 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
VPS45-203ENST00000419023 TRIM47Q96LD4 638 aa9.56□□□□□ -0.88
VPS45-203ENST00000419023 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
VPS45-203ENST00000419023 DNMBPQ6XZF7 1577 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 CCDC88BA6NC98 1476 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 FIGNL2A6NMB9 653 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 TMEM229AB2RXF0 380 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 C11orf95C9JLR9 678 aaPredicted RBP9.55□□□□□ -0.88
VPS45-203ENST00000419023 CRTC2Q53ET0 693 aaPredicted RBP9.55□□□□□ -0.88
VPS45-203ENST00000419023 CCDC102BQ68D86 513 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 LARGE2Q8N3Y3 721 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 XAGE2Q96GT9 111 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 ESYT1Q9BSJ8 1104 aa9.55□□□□□ -0.88
VPS45-203ENST00000419023 SOBPA7XYQ1 873 aa9.54□□□□□ -0.88
VPS45-203ENST00000419023 INHAP05111 366 aa9.54□□□□□ -0.88
VPS45-203ENST00000419023 SNRPBP14678 240 aaKnown RBP9.54□□□□□ -0.88
VPS45-203ENST00000419023 SRPK2P78362 688 aaKnown RBP9.54□□□□□ -0.88
VPS45-203ENST00000419023 FOXD4L5Q5VV16 416 aaPredicted RBP9.54□□□□□ -0.88
VPS45-203ENST00000419023 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS45-203ENST00000419023 PBXIP1Q96AQ6 731 aa9.54□□□□□ -0.88
VPS45-203ENST00000419023 SERTAD1Q9UHV2 236 aa9.54□□□□□ -0.88
VPS45-203ENST00000419023 TDRD9Q8NDG6 1382 aaKnown RBP9.53□□□□□ -0.88
VPS45-203ENST00000419023 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L10C9JJH3 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L12C9JPN9 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L21D6R901 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 PTK7Q13308 1070 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 SOGA1O94964 1423 aa9.53□□□□□ -0.88
VPS45-203ENST00000419023 MAN1A2O60476 641 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 RNF144AP50876 292 aaPredicted RBP9.52□□□□□ -0.89
VPS45-203ENST00000419023 CENPCQ03188 943 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 SIX5Q8N196 739 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 ZNF358Q9NW07 568 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 DNMT3LQ9UJW3 386 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
VPS45-203ENST00000419023 HRH3Q9Y5N1 445 aa9.52□□□□□ -0.89
VPS45-203ENST00000419023 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
VPS45-203ENST00000419023 SFI1A8K8P3 1242 aa9.51□□□□□ -0.89
VPS45-203ENST00000419023 WASLO00401 505 aaPredicted RBP9.51□□□□□ -0.89
VPS45-203ENST00000419023 DKK1O94907 266 aa9.51□□□□□ -0.89
VPS45-203ENST00000419023 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
VPS45-203ENST00000419023 GPC1P35052 558 aa9.5□□□□□ -0.89
VPS45-203ENST00000419023 DPYDQ12882 1025 aa9.5□□□□□ -0.89
VPS45-203ENST00000419023 TLR1Q15399 786 aa9.5□□□□□ -0.89
VPS45-203ENST00000419023 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
VPS45-203ENST00000419023 ANKMY2Q8IV38 441 aa9.5□□□□□ -0.89
VPS45-203ENST00000419023 POLA1P09884 1462 aaPredicted RBP9.5□□□□□ -0.89
VPS45-203ENST00000419023 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
VPS45-203ENST00000419023 SNAPC4Q5SXM2 1469 aa9.49□□□□□ -0.89
VPS45-203ENST00000419023 GRIP2Q9C0E4 1043 aa9.49□□□□□ -0.89
VPS45-203ENST00000419023 BACH1O14867 736 aa9.48□□□□□ -0.89
VPS45-203ENST00000419023 SMTNP53814 917 aa9.48□□□□□ -0.89
VPS45-203ENST00000419023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.48□□□□□ -0.89
VPS45-203ENST00000419023 LYSMD3Q7Z3D4 306 aa9.48□□□□□ -0.89
VPS45-203ENST00000419023 SLC4A9Q96Q91 983 aa9.48□□□□□ -0.89
VPS45-203ENST00000419023 ARXQ96QS3 562 aa9.48□□□□□ -0.89
VPS45-203ENST00000419023 ZSCAN10Q96SZ4 725 aaPredicted RBP9.48□□□□□ -0.89
VPS45-203ENST00000419023 FHDC1Q9C0D6 1143 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms