RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 ATP6V1AP38606 617 aa25.15■■□□□ 1.62
COPS8-204ENST00000419015 COL5A3P25940 1745 aaPredicted RBP25.14■■□□□ 1.61
COPS8-204ENST00000419015 KDM6AO15550 1401 aaPredicted RBP25.13■■□□□ 1.61
COPS8-204ENST00000419015 ERVV-2B6SEH9 535 aa25.13■■□□□ 1.61
COPS8-204ENST00000419015 SLC4A9Q96Q91 983 aa25.13■■□□□ 1.61
COPS8-204ENST00000419015 C1QTNF8P60827 252 aa25.12■■□□□ 1.61
COPS8-204ENST00000419015 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
COPS8-204ENST00000419015 DCAF5Q96JK2 942 aa25.12■■□□□ 1.61
COPS8-204ENST00000419015 GNPATO15228 680 aa25.11■■□□□ 1.61
COPS8-204ENST00000419015 HSP90AB1P08238 724 aaKnown RBP25.1■■□□□ 1.61
COPS8-204ENST00000419015 PLEKHO1Q53GL0 409 aaPredicted RBP25.1■■□□□ 1.61
COPS8-204ENST00000419015 MORC1Q86VD1 984 aa25.1■■□□□ 1.61
COPS8-204ENST00000419015 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
COPS8-204ENST00000419015 AMOTQ4VCS5 1084 aa25.09■■□□□ 1.61
COPS8-204ENST00000419015 MYH14Q7Z406 1995 aaKnown RBP25.09■■□□□ 1.61
COPS8-204ENST00000419015 KIF13BQ9NQT8 1826 aa25.08■■□□□ 1.61
COPS8-204ENST00000419015 ZNF530Q6P9A1 599 aaPredicted RBP25.07■■□□□ 1.6
COPS8-204ENST00000419015 AMER1Q5JTC6 1135 aaPredicted RBP25.06■■□□□ 1.6
COPS8-204ENST00000419015 KNSTRNQ9Y448 316 aa25.06■■□□□ 1.6
COPS8-204ENST00000419015 IL13P35225 146 aa25.05■■□□□ 1.6
COPS8-204ENST00000419015 KIAA1551Q9HCM1 1747 aa25.05■■□□□ 1.6
COPS8-204ENST00000419015 SCN11AQ9UI33 1791 aa25.05■■□□□ 1.6
COPS8-204ENST00000419015 RC3H1Q5TC82 1133 aaKnown RBP25.04■■□□□ 1.6
COPS8-204ENST00000419015 RBM42Q9BTD8 480 aaKnown RBP25.04■■□□□ 1.6
COPS8-204ENST00000419015 GIGYF1O75420 1035 aaPredicted RBP25.03■■□□□ 1.6
COPS8-204ENST00000419015 CABP4P57796 275 aa25.03■■□□□ 1.6
COPS8-204ENST00000419015 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
COPS8-204ENST00000419015 RTCBQ9Y3I0 505 aaKnown RBP25.03■■□□□ 1.6
COPS8-204ENST00000419015 CNTNAP4Q9C0A0 1308 aa25.03■■□□□ 1.6
COPS8-204ENST00000419015 C4AP0C0L4 1744 aa25.03■■□□□ 1.6
COPS8-204ENST00000419015 CICQ96RK0 1608 aaPredicted RBP25.02■■□□□ 1.6
COPS8-204ENST00000419015 MTHFSP49914 203 aa25.02■■□□□ 1.6
COPS8-204ENST00000419015 KIF7Q2M1P5 1343 aa25.02■■□□□ 1.6
COPS8-204ENST00000419015 ADCY9O60503 1353 aa25.02■■□□□ 1.6
COPS8-204ENST00000419015 MMP10P09238 476 aa25.01■■□□□ 1.59
COPS8-204ENST00000419015 TRAPPC3LQ5T215 181 aa25.01■■□□□ 1.59
COPS8-204ENST00000419015 ATP10DQ9P241 1426 aa25.01■■□□□ 1.59
COPS8-204ENST00000419015 ADRA2BP18089 450 aa25■■□□□ 1.59
COPS8-204ENST00000419015 C1orf141Q5JVX7 400 aa25■■□□□ 1.59
COPS8-204ENST00000419015 NFATC2IPQ8NCF5 419 aa25■■□□□ 1.59
COPS8-204ENST00000419015 ARHGEF1Q92888 912 aaKnown RBP25■■□□□ 1.59
COPS8-204ENST00000419015 TJP1Q07157 1748 aa25■■□□□ 1.59
COPS8-204ENST00000419015 SENP3-EIF4A1A0A087X0R7 540 aa24.99■■□□□ 1.59
COPS8-204ENST00000419015 VIRMAQ69YN4 1812 aaKnown RBP24.99■■□□□ 1.59
COPS8-204ENST00000419015 N4BP2Q86UW6 1770 aaPredicted RBP24.98■■□□□ 1.59
COPS8-204ENST00000419015 CEP350Q5VT06 3117 aa24.98■■□□□ 1.59
COPS8-204ENST00000419015 PXDNLA1KZ92 1463 aa24.98■■□□□ 1.59
COPS8-204ENST00000419015 RPS6KA4O75676 772 aa24.98■■□□□ 1.59
COPS8-204ENST00000419015 WWC3Q9ULE0 1092 aa24.98■■□□□ 1.59
COPS8-204ENST00000419015 PER1O15534 1290 aaPredicted RBP24.97■■□□□ 1.59
COPS8-204ENST00000419015 GYS1P13807 737 aa24.97■■□□□ 1.59
COPS8-204ENST00000419015 NLGN1Q8N2Q7 840 aa24.97■■□□□ 1.59
COPS8-204ENST00000419015 C10orf71Q711Q0 1435 aa24.95■■□□□ 1.59
COPS8-204ENST00000419015 PTCD1O75127 700 aaKnown RBP24.95■■□□□ 1.58
COPS8-204ENST00000419015 BRCA1P38398 1863 aaKnown RBP24.95■■□□□ 1.58
COPS8-204ENST00000419015 ADAMTS7Q9UKP4 1686 aa24.94■■□□□ 1.58
COPS8-204ENST00000419015 RFC4P35249 363 aa24.93■■□□□ 1.58
COPS8-204ENST00000419015 AKAP4Q5JQC9 854 aa24.93■■□□□ 1.58
COPS8-204ENST00000419015 MRC1P22897 1456 aa24.93■■□□□ 1.58
COPS8-204ENST00000419015 CRKLP46109 303 aaKnown RBP24.92■■□□□ 1.58
COPS8-204ENST00000419015 TGFB2P61812 414 aa24.92■■□□□ 1.58
COPS8-204ENST00000419015 SLC52A2Q9HAB3 445 aa24.9■■□□□ 1.58
COPS8-204ENST00000419015 LGR6Q9HBX8 967 aa24.9■■□□□ 1.58
COPS8-204ENST00000419015 GPBP1L1Q9HC44 474 aaPredicted RBP24.89■■□□□ 1.58
COPS8-204ENST00000419015 HMOX1P09601 288 aa24.88■■□□□ 1.57
COPS8-204ENST00000419015 INTS5Q6P9B9 1019 aaKnown RBP24.88■■□□□ 1.57
COPS8-204ENST00000419015 USP42Q9H9J4 1324 aaKnown RBP24.87■■□□□ 1.57
COPS8-204ENST00000419015 A0A0G2JLW4 131 aa24.87■■□□□ 1.57
COPS8-204ENST00000419015 CCDC87Q9NVE4 849 aa24.87■■□□□ 1.57
COPS8-204ENST00000419015 SRP68Q9UHB9 627 aaKnown RBP24.87■■□□□ 1.57
COPS8-204ENST00000419015 RNMTO43148 476 aaKnown RBP24.86■■□□□ 1.57
COPS8-204ENST00000419015 CC2D1BQ5T0F9 858 aaKnown RBP24.86■■□□□ 1.57
COPS8-204ENST00000419015 KCPQ6ZWJ8 1503 aa24.86■■□□□ 1.57
COPS8-204ENST00000419015 COL3A1P02461 1466 aaPredicted RBP24.85■■□□□ 1.57
COPS8-204ENST00000419015 FKBP8Q14318 412 aa24.85■■□□□ 1.57
COPS8-204ENST00000419015 MTHFSDQ2M296 383 aaKnown RBP24.85■■□□□ 1.57
COPS8-204ENST00000419015 PARP3Q9Y6F1 533 aa24.85■■□□□ 1.57
COPS8-204ENST00000419015 ARFGEF1Q9Y6D6 1849 aa24.84■■□□□ 1.57
COPS8-204ENST00000419015 NPC1L1Q9UHC9 1359 aa24.84■■□□□ 1.57
COPS8-204ENST00000419015 DIAPH1O60610 1272 aaKnown RBP24.84■■□□□ 1.57
COPS8-204ENST00000419015 DPEP1P16444 411 aa24.84■■□□□ 1.57
COPS8-204ENST00000419015 KCNA3P22001 575 aa24.84■■□□□ 1.57
COPS8-204ENST00000419015 DNAJC10Q8IXB1 793 aa24.84■■□□□ 1.57
COPS8-204ENST00000419015 ZNF526Q8TF50 670 aaPredicted RBP24.84■■□□□ 1.57
COPS8-204ENST00000419015 UBR2Q8IWV8 1755 aa24.84■■□□□ 1.57
COPS8-204ENST00000419015 SLC39A6Q13433 755 aa24.83■■□□□ 1.57
COPS8-204ENST00000419015 BCS1LQ9Y276 419 aa24.83■■□□□ 1.57
COPS8-204ENST00000419015 DDR1Q08345 913 aa24.82■■□□□ 1.56
COPS8-204ENST00000419015 CYP19A1P11511 503 aaPredicted RBP24.8■■□□□ 1.56
COPS8-204ENST00000419015 SOS1Q07889 1333 aaPredicted RBP24.8■■□□□ 1.56
COPS8-204ENST00000419015 TM4SF1P30408 202 aa24.79■■□□□ 1.56
COPS8-204ENST00000419015 AFDNP55196 1824 aaKnown RBP24.78■■□□□ 1.56
COPS8-204ENST00000419015 KIF3CO14782 793 aa24.78■■□□□ 1.56
COPS8-204ENST00000419015 POLRMTO00411 1230 aaKnown RBP24.77■■□□□ 1.56
COPS8-204ENST00000419015 SIPA1L3O60292 1781 aaPredicted RBP24.77■■□□□ 1.56
COPS8-204ENST00000419015 NRXN2Q9P2S2 1712 aa24.76■■□□□ 1.55
COPS8-204ENST00000419015 FCHSD2O94868 740 aa24.76■■□□□ 1.55
COPS8-204ENST00000419015 USPL1Q5W0Q7 1092 aa24.76■■□□□ 1.55
COPS8-204ENST00000419015 VSIG10Q8N0Z9 540 aa24.76■■□□□ 1.55
COPS8-204ENST00000419015 ZBTB1Q9Y2K1 713 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms