RNA–Protein interactions for RNA: ENST00000418339.5

TRIOBP-208, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 2

Gene TRIOBP, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-208ENST00000418339 ATP6V1AP38606 617 aa27.35■■□□□ 1.97
TRIOBP-208ENST00000418339 CABP4P57796 275 aa27.35■■□□□ 1.97
TRIOBP-208ENST00000418339 ATG3Q9NT62 314 aa27.35■■□□□ 1.97
TRIOBP-208ENST00000418339 KDRP35968 1356 aa27.35■■□□□ 1.97
TRIOBP-208ENST00000418339 MSL1Q68DK7 614 aa27.34■■□□□ 1.97
TRIOBP-208ENST00000418339 UBR3Q6ZT12 1888 aa27.34■■□□□ 1.97
TRIOBP-208ENST00000418339 PHF14O94880 888 aa27.33■■□□□ 1.97
TRIOBP-208ENST00000418339 LINC00116Q8NCU8 138 aa27.32■■□□□ 1.96
TRIOBP-208ENST00000418339 NPC1L1Q9UHC9 1359 aa27.32■■□□□ 1.96
TRIOBP-208ENST00000418339 DIAPH1O60610 1272 aaKnown RBP27.31■■□□□ 1.96
TRIOBP-208ENST00000418339 RBM42Q9BTD8 480 aaKnown RBP27.31■■□□□ 1.96
TRIOBP-208ENST00000418339 KDM6AO15550 1401 aaPredicted RBP27.31■■□□□ 1.96
TRIOBP-208ENST00000418339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.29■■□□□ 1.96
TRIOBP-208ENST00000418339 SSFA2P28290 1259 aa27.29■■□□□ 1.96
TRIOBP-208ENST00000418339 GNPATO15228 680 aa27.28■■□□□ 1.96
TRIOBP-208ENST00000418339 HMOX1P09601 288 aa27.28■■□□□ 1.96
TRIOBP-208ENST00000418339 ITPK1Q13572 414 aa27.28■■□□□ 1.96
TRIOBP-208ENST00000418339 GPR162Q16538 588 aa27.28■■□□□ 1.96
TRIOBP-208ENST00000418339 SCN11AQ9UI33 1791 aa27.27■■□□□ 1.96
TRIOBP-208ENST00000418339 AKAP4Q5JQC9 854 aa27.26■■□□□ 1.95
TRIOBP-208ENST00000418339 ZNF831Q5JPB2 1677 aa27.25■■□□□ 1.95
TRIOBP-208ENST00000418339 PELP1Q8IZL8 1130 aaKnown RBP27.25■■□□□ 1.95
TRIOBP-208ENST00000418339 CHD4Q14839 1912 aa27.24■■□□□ 1.95
TRIOBP-208ENST00000418339 NFATC2IPQ8NCF5 419 aa27.24■■□□□ 1.95
TRIOBP-208ENST00000418339 SMIM5Q71RC9 77 aa27.23■■□□□ 1.95
TRIOBP-208ENST00000418339 AMIGO3Q86WK7 504 aa27.23■■□□□ 1.95
TRIOBP-208ENST00000418339 VIRMAQ69YN4 1812 aaKnown RBP27.22■■□□□ 1.95
TRIOBP-208ENST00000418339 U2SURPO15042 1029 aaKnown RBP27.21■■□□□ 1.95
TRIOBP-208ENST00000418339 NLGN2Q8NFZ4 835 aa27.21■■□□□ 1.95
TRIOBP-208ENST00000418339 RTCBQ9Y3I0 505 aaKnown RBP27.21■■□□□ 1.95
TRIOBP-208ENST00000418339 PTCD1O75127 700 aaKnown RBP27.2■■□□□ 1.94
TRIOBP-208ENST00000418339 COL5A3P25940 1745 aaPredicted RBP27.2■■□□□ 1.94
TRIOBP-208ENST00000418339 TRAPPC3LQ5T215 181 aa27.19■■□□□ 1.94
TRIOBP-208ENST00000418339 CFAP53Q96M91 514 aa27.19■■□□□ 1.94
TRIOBP-208ENST00000418339 SLC4A9Q96Q91 983 aa27.19■■□□□ 1.94
TRIOBP-208ENST00000418339 RC3H1Q5TC82 1133 aaKnown RBP27.17■■□□□ 1.94
TRIOBP-208ENST00000418339 CD2APQ9Y5K6 639 aa27.17■■□□□ 1.94
TRIOBP-208ENST00000418339 CNTNAP4Q9C0A0 1308 aa27.16■■□□□ 1.94
TRIOBP-208ENST00000418339 MTHFSDQ2M296 383 aaKnown RBP27.16■■□□□ 1.94
TRIOBP-208ENST00000418339 SLC52A2Q9HAB3 445 aa27.16■■□□□ 1.94
TRIOBP-208ENST00000418339 COL3A1P02461 1466 aaPredicted RBP27.16■■□□□ 1.94
TRIOBP-208ENST00000418339 RNMTO43148 476 aaKnown RBP27.15■■□□□ 1.94
TRIOBP-208ENST00000418339 LGR6Q9HBX8 967 aa27.15■■□□□ 1.94
TRIOBP-208ENST00000418339 ADRA2BP18089 450 aa27.14■■□□□ 1.94
TRIOBP-208ENST00000418339 RPS6KA4O75676 772 aa27.12■■□□□ 1.93
TRIOBP-208ENST00000418339 RFC4P35249 363 aa27.12■■□□□ 1.93
TRIOBP-208ENST00000418339 NUDCQ9Y266 331 aa27.11■■□□□ 1.93
TRIOBP-208ENST00000418339 MYH14Q7Z406 1995 aaKnown RBP27.11■■□□□ 1.93
TRIOBP-208ENST00000418339 UTRNP46939 3433 aa27.1■■□□□ 1.93
TRIOBP-208ENST00000418339 GRIN3BO60391 1043 aa27.1■■□□□ 1.93
TRIOBP-208ENST00000418339 GAS2L2Q8NHY3 880 aa27.1■■□□□ 1.93
TRIOBP-208ENST00000418339 ARHGEF1Q92888 912 aaKnown RBP27.1■■□□□ 1.93
TRIOBP-208ENST00000418339 MRC1P22897 1456 aa27.1■■□□□ 1.93
TRIOBP-208ENST00000418339 TJP1Q07157 1748 aa27.1■■□□□ 1.93
TRIOBP-208ENST00000418339 CRKLP46109 303 aaKnown RBP27.09■■□□□ 1.93
TRIOBP-208ENST00000418339 NLGN1Q8N2Q7 840 aa27.09■■□□□ 1.93
TRIOBP-208ENST00000418339 MMP10P09238 476 aa27.08■■□□□ 1.93
TRIOBP-208ENST00000418339 CICQ96RK0 1608 aaPredicted RBP27.08■■□□□ 1.93
TRIOBP-208ENST00000418339 ADAMTS7Q9UKP4 1686 aa27.07■■□□□ 1.92
TRIOBP-208ENST00000418339 PPP2R1AP30153 589 aa27.06■■□□□ 1.92
TRIOBP-208ENST00000418339 SLC39A6Q13433 755 aa27.06■■□□□ 1.92
TRIOBP-208ENST00000418339 C4AP0C0L4 1744 aa27.06■■□□□ 1.92
TRIOBP-208ENST00000418339 GNAT3A8MTJ3 354 aa27.05■■□□□ 1.92
TRIOBP-208ENST00000418339 YBX3P16989 372 aaKnown RBP eCLIP27.05■■□□□ 1.92
TRIOBP-208ENST00000418339 RALBP1Q15311 655 aa27.05■■□□□ 1.92
TRIOBP-208ENST00000418339 TEFQ10587 303 aa27.04■■□□□ 1.92
TRIOBP-208ENST00000418339 TTC5Q8N0Z6 440 aa27.04■■□□□ 1.92
TRIOBP-208ENST00000418339 ZNF784Q8NCA9 323 aaPredicted RBP27.04■■□□□ 1.92
TRIOBP-208ENST00000418339 PRKAR2BP31323 418 aa27.03■■□□□ 1.92
TRIOBP-208ENST00000418339 DNAJC10Q8IXB1 793 aa27.03■■□□□ 1.92
TRIOBP-208ENST00000418339 U2AF1L5P0DN76 240 aaPredicted RBP27.02■■□□□ 1.92
TRIOBP-208ENST00000418339 GYS1P13807 737 aa27.02■■□□□ 1.92
TRIOBP-208ENST00000418339 U2AF1Q01081 240 aaKnown RBP eCLIP27.02■■□□□ 1.92
TRIOBP-208ENST00000418339 PRKRIP1Q9H875 184 aaPredicted RBP27.02■■□□□ 1.92
TRIOBP-208ENST00000418339 CCDC87Q9NVE4 849 aa27.02■■□□□ 1.92
TRIOBP-208ENST00000418339 GOLGB1Q14789 3259 aaKnown RBP27.02■■□□□ 1.92
TRIOBP-208ENST00000418339 PARP3Q9Y6F1 533 aa27.01■■□□□ 1.91
TRIOBP-208ENST00000418339 KCPQ6ZWJ8 1503 aa27■■□□□ 1.91
TRIOBP-208ENST00000418339 DIEXFQ68CQ4 756 aaKnown RBP26.99■■□□□ 1.91
TRIOBP-208ENST00000418339 INTS5Q6P9B9 1019 aaKnown RBP26.99■■□□□ 1.91
TRIOBP-208ENST00000418339 VSIG10Q8N0Z9 540 aa26.99■■□□□ 1.91
TRIOBP-208ENST00000418339 RSPH6AQ9H0K4 717 aa26.99■■□□□ 1.91
TRIOBP-208ENST00000418339 ANP32CO43423 234 aa26.98■■□□□ 1.91
TRIOBP-208ENST00000418339 UBR2Q8IWV8 1755 aa26.98■■□□□ 1.91
TRIOBP-208ENST00000418339 USP42Q9H9J4 1324 aaKnown RBP26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 ZPR1O75312 459 aa26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 CYP19A1P11511 503 aaPredicted RBP26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 IL17REQ8NFR9 667 aa26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 PHACTR3Q96KR7 559 aa26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 SRP68Q9UHB9 627 aaKnown RBP26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 WWC3Q9ULE0 1092 aa26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 KIF13BQ9NQT8 1826 aa26.97■■□□□ 1.91
TRIOBP-208ENST00000418339 SIPA1L3O60292 1781 aaPredicted RBP26.95■■□□□ 1.9
TRIOBP-208ENST00000418339 FCHSD2O94868 740 aa26.95■■□□□ 1.9
TRIOBP-208ENST00000418339 MYBBP1AQ9BQG0 1328 aaKnown RBP26.94■■□□□ 1.9
TRIOBP-208ENST00000418339 TGFB2P61812 414 aa26.94■■□□□ 1.9
TRIOBP-208ENST00000418339 RTF1Q92541 710 aaKnown RBP26.94■■□□□ 1.9
TRIOBP-208ENST00000418339 SOS1Q07889 1333 aaPredicted RBP26.93■■□□□ 1.9
TRIOBP-208ENST00000418339 STARD3NLO95772 234 aa26.93■■□□□ 1.9
TRIOBP-208ENST00000418339 ZNF790Q6PG37 636 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms