RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
LINC00940-201ENST00000418006 ARHGAP45Q92619 1136 aa17.28■□□□□ 0.36
LINC00940-201ENST00000418006 TBC1D32Q96NH3 1257 aa17.28■□□□□ 0.36
LINC00940-201ENST00000418006 RGPD5Q99666 1765 aa17.28■□□□□ 0.36
LINC00940-201ENST00000418006 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
LINC00940-201ENST00000418006 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
LINC00940-201ENST00000418006 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
LINC00940-201ENST00000418006 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
LINC00940-201ENST00000418006 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.36
LINC00940-201ENST00000418006 GZF1Q9H116 711 aaPredicted RBP17.27■□□□□ 0.36
LINC00940-201ENST00000418006 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
LINC00940-201ENST00000418006 MCM4P33991 863 aa17.26■□□□□ 0.35
LINC00940-201ENST00000418006 ZMYND15Q9H091 742 aa17.26■□□□□ 0.35
LINC00940-201ENST00000418006 PXDNQ92626 1479 aa17.26■□□□□ 0.35
LINC00940-201ENST00000418006 RRP9O43818 475 aaKnown RBP17.26■□□□□ 0.35
LINC00940-201ENST00000418006 ZBTB7BO15156 539 aaPredicted RBP17.25■□□□□ 0.35
LINC00940-201ENST00000418006 TEFQ10587 303 aa17.25■□□□□ 0.35
LINC00940-201ENST00000418006 G2E3Q7L622 706 aa17.25■□□□□ 0.35
LINC00940-201ENST00000418006 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
LINC00940-201ENST00000418006 AKAP4Q5JQC9 854 aa17.25■□□□□ 0.35
LINC00940-201ENST00000418006 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
LINC00940-201ENST00000418006 ABCC4O15439 1325 aa17.24■□□□□ 0.35
LINC00940-201ENST00000418006 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
LINC00940-201ENST00000418006 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
LINC00940-201ENST00000418006 SLC4A10Q6U841 1118 aa17.24■□□□□ 0.35
LINC00940-201ENST00000418006 F6X3S4 739 aa17.23■□□□□ 0.35
LINC00940-201ENST00000418006 KCNQ3O43525 872 aa17.23■□□□□ 0.35
LINC00940-201ENST00000418006 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
LINC00940-201ENST00000418006 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
LINC00940-201ENST00000418006 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
LINC00940-201ENST00000418006 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
LINC00940-201ENST00000418006 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
LINC00940-201ENST00000418006 TRAK2O60296 914 aa17.21■□□□□ 0.35
LINC00940-201ENST00000418006 RNMTO43148 476 aaKnown RBP17.21■□□□□ 0.34
LINC00940-201ENST00000418006 MRE11P49959 708 aa17.21■□□□□ 0.34
LINC00940-201ENST00000418006 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.34
LINC00940-201ENST00000418006 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
LINC00940-201ENST00000418006 HDAC1Q13547 482 aaPredicted RBP17.2■□□□□ 0.34
LINC00940-201ENST00000418006 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
LINC00940-201ENST00000418006 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
LINC00940-201ENST00000418006 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
LINC00940-201ENST00000418006 LRRC37A3O60309 1634 aa17.19■□□□□ 0.34
LINC00940-201ENST00000418006 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
LINC00940-201ENST00000418006 PTPRCP08575 1304 aa17.19■□□□□ 0.34
LINC00940-201ENST00000418006 CHMP4BQ9H444 224 aaKnown RBP17.18■□□□□ 0.34
LINC00940-201ENST00000418006 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
LINC00940-201ENST00000418006 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
LINC00940-201ENST00000418006 FLIIQ13045 1269 aa17.17■□□□□ 0.34
LINC00940-201ENST00000418006 INTS3Q68E01 1043 aaKnown RBP17.17■□□□□ 0.34
LINC00940-201ENST00000418006 TOM1L2Q6ZVM7 507 aa17.17■□□□□ 0.34
LINC00940-201ENST00000418006 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
LINC00940-201ENST00000418006 RGS12O14924 1447 aa17.17■□□□□ 0.34
LINC00940-201ENST00000418006 GRPEL1Q9HAV7 217 aa17.16■□□□□ 0.34
LINC00940-201ENST00000418006 ESPNB1AK53 854 aa17.16■□□□□ 0.34
LINC00940-201ENST00000418006 PHAXQ9H814 394 aaKnown RBP17.16■□□□□ 0.34
LINC00940-201ENST00000418006 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
LINC00940-201ENST00000418006 NCAPD2Q15021 1401 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 ANXA1P04083 346 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 MEIS3Q99687 375 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 MEGF6O75095 1541 aa17.15■□□□□ 0.34
LINC00940-201ENST00000418006 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
LINC00940-201ENST00000418006 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.33
LINC00940-201ENST00000418006 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.33
LINC00940-201ENST00000418006 SMC5Q8IY18 1101 aa17.14■□□□□ 0.33
LINC00940-201ENST00000418006 NFATC2IPQ8NCF5 419 aa17.13■□□□□ 0.33
LINC00940-201ENST00000418006 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
LINC00940-201ENST00000418006 CPDO75976 1380 aa17.13■□□□□ 0.33
LINC00940-201ENST00000418006 COL18A1P39060 1754 aa17.13■□□□□ 0.33
LINC00940-201ENST00000418006 LMO7Q8WWI1 1683 aa17.13■□□□□ 0.33
LINC00940-201ENST00000418006 PHKG2P15735 406 aa17.13■□□□□ 0.33
LINC00940-201ENST00000418006 EVA1CP58658 441 aa17.13■□□□□ 0.33
LINC00940-201ENST00000418006 C22orf23Q9BZE7 217 aa17.12■□□□□ 0.33
LINC00940-201ENST00000418006 DDX11L8A8MPP1 907 aa17.11■□□□□ 0.33
LINC00940-201ENST00000418006 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
LINC00940-201ENST00000418006 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
LINC00940-201ENST00000418006 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
LINC00940-201ENST00000418006 CRYBG1Q9Y4K1 1723 aa17.11■□□□□ 0.33
LINC00940-201ENST00000418006 APBB1O00213 710 aa17.1■□□□□ 0.33
LINC00940-201ENST00000418006 CYP27B1O15528 508 aa17.1■□□□□ 0.33
LINC00940-201ENST00000418006 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
LINC00940-201ENST00000418006 NUCB1Q02818 461 aa17.09■□□□□ 0.33
LINC00940-201ENST00000418006 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
LINC00940-201ENST00000418006 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
LINC00940-201ENST00000418006 WDR17Q8IZU2 1322 aa17.09■□□□□ 0.33
LINC00940-201ENST00000418006 SLC52A2Q9HAB3 445 aa17.09■□□□□ 0.33
LINC00940-201ENST00000418006 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.33
LINC00940-201ENST00000418006 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.32
LINC00940-201ENST00000418006 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
LINC00940-201ENST00000418006 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
LINC00940-201ENST00000418006 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
LINC00940-201ENST00000418006 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
LINC00940-201ENST00000418006 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
LINC00940-201ENST00000418006 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
LINC00940-201ENST00000418006 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
LINC00940-201ENST00000418006 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
LINC00940-201ENST00000418006 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms