RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ARHGAP27Q6ZUM4 889 aa19.28■□□□□ 0.68
SSB-204ENST00000417292 TMOD3Q9NYL9 352 aa19.28■□□□□ 0.68
SSB-204ENST00000417292 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
SSB-204ENST00000417292 COL13A1Q5TAT6 717 aaPredicted RBP19.27■□□□□ 0.68
SSB-204ENST00000417292 KIF20BQ96Q89 1820 aa19.26■□□□□ 0.67
SSB-204ENST00000417292 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
SSB-204ENST00000417292 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
SSB-204ENST00000417292 SPG7Q9UQ90 795 aa19.26■□□□□ 0.67
SSB-204ENST00000417292 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
SSB-204ENST00000417292 SLC24A1O60721 1099 aa19.25■□□□□ 0.67
SSB-204ENST00000417292 DPEP1P16444 411 aa19.25■□□□□ 0.67
SSB-204ENST00000417292 RBM46Q8TBY0 533 aaKnown RBP19.25■□□□□ 0.67
SSB-204ENST00000417292 TMF1P82094 1093 aa19.24■□□□□ 0.67
SSB-204ENST00000417292 NLGN1Q8N2Q7 840 aa19.24■□□□□ 0.67
SSB-204ENST00000417292 KLRG1Q96E93 195 aa19.24■□□□□ 0.67
SSB-204ENST00000417292 BRCA1P38398 1863 aaKnown RBP19.24■□□□□ 0.67
SSB-204ENST00000417292 KDRP35968 1356 aa19.23■□□□□ 0.67
SSB-204ENST00000417292 FCHSD2O94868 740 aa19.23■□□□□ 0.67
SSB-204ENST00000417292 KCNA3P22001 575 aa19.23■□□□□ 0.67
SSB-204ENST00000417292 TRAPPC3LQ5T215 181 aa19.23■□□□□ 0.67
SSB-204ENST00000417292 C9orf131Q5VYM1 1079 aa19.23■□□□□ 0.67
SSB-204ENST00000417292 JMYQ8N9B5 988 aa19.23■□□□□ 0.67
SSB-204ENST00000417292 SLC4A9Q96Q91 983 aa19.23■□□□□ 0.67
SSB-204ENST00000417292 RTCBQ9Y3I0 505 aaKnown RBP19.23■□□□□ 0.67
SSB-204ENST00000417292 PHKG2P15735 406 aa19.22■□□□□ 0.67
SSB-204ENST00000417292 ARHGEF1Q92888 912 aaKnown RBP19.22■□□□□ 0.67
SSB-204ENST00000417292 EYA1Q99502 592 aa19.22■□□□□ 0.67
SSB-204ENST00000417292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.672e-7■■■□□ 15.3
SSB-204ENST00000417292 C4AP0C0L4 1744 aa19.22■□□□□ 0.67
SSB-204ENST00000417292 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
SSB-204ENST00000417292 GYS1P13807 737 aa19.21■□□□□ 0.67
SSB-204ENST00000417292 CARD14Q9BXL6 1004 aa19.21■□□□□ 0.67
SSB-204ENST00000417292 IFNL2Q8IZJ0 200 aa19.2■□□□□ 0.66
SSB-204ENST00000417292 CCDC87Q9NVE4 849 aa19.2■□□□□ 0.66
SSB-204ENST00000417292 KCPQ6ZWJ8 1503 aa19.2■□□□□ 0.66
SSB-204ENST00000417292 ANKRD26Q9UPS8 1709 aa19.2■□□□□ 0.66
SSB-204ENST00000417292 FSTL1Q12841 308 aa19.19■□□□□ 0.66
SSB-204ENST00000417292 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
SSB-204ENST00000417292 WASHC2AQ641Q2 1341 aa19.19■□□□□ 0.66
SSB-204ENST00000417292 PLEKHG2Q9H7P9 1386 aa19.19■□□□□ 0.66
SSB-204ENST00000417292 ARFGEF1Q9Y6D6 1849 aa19.18■□□□□ 0.66
SSB-204ENST00000417292 CAPN15O75808 1086 aa19.18■□□□□ 0.66
SSB-204ENST00000417292 ZNF831Q5JPB2 1677 aa19.17■□□□□ 0.66
SSB-204ENST00000417292 COL5A3P25940 1745 aaPredicted RBP19.17■□□□□ 0.66
SSB-204ENST00000417292 ADRA2BP18089 450 aa19.17■□□□□ 0.66
SSB-204ENST00000417292 RC3H1Q5TC82 1133 aaKnown RBP19.17■□□□□ 0.66
SSB-204ENST00000417292 PARP3Q9Y6F1 533 aa19.17■□□□□ 0.66
SSB-204ENST00000417292 RFC4P35249 363 aa19.16■□□□□ 0.66
SSB-204ENST00000417292 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
SSB-204ENST00000417292 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
SSB-204ENST00000417292 CNTNAP4Q9C0A0 1308 aa19.16■□□□□ 0.66
SSB-204ENST00000417292 RPS6KA4O75676 772 aa19.15■□□□□ 0.66
SSB-204ENST00000417292 RRAGCQ9HB90 399 aa19.15■□□□□ 0.66
SSB-204ENST00000417292 PIM2Q9P1W9 311 aa19.15■□□□□ 0.66
SSB-204ENST00000417292 MYH14Q7Z406 1995 aaKnown RBP19.15■□□□□ 0.66
SSB-204ENST00000417292 RNF181Q9P0P0 153 aa19.14■□□□□ 0.65
SSB-204ENST00000417292 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.65
SSB-204ENST00000417292 DALRD3Q5D0E6 543 aaKnown RBP19.13■□□□□ 0.65
SSB-204ENST00000417292 TNS4Q8IZW8 715 aa19.13■□□□□ 0.65
SSB-204ENST00000417292 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
SSB-204ENST00000417292 POLKQ9UBT6 870 aa19.12■□□□□ 0.65
SSB-204ENST00000417292 DDR1Q08345 913 aa19.11■□□□□ 0.65
SSB-204ENST00000417292 EIF4A2Q14240 407 aaKnown RBP19.11■□□□□ 0.65
SSB-204ENST00000417292 SRP68Q9UHB9 627 aaKnown RBP19.11■□□□□ 0.65
SSB-204ENST00000417292 TNRC6CQ9HCJ0 1690 aaKnown RBP19.11■□□□□ 0.65
SSB-204ENST00000417292 SBF1O95248 1867 aa19.1■□□□□ 0.65
SSB-204ENST00000417292 CHRNA5P30532 468 aa19.1■□□□□ 0.65
SSB-204ENST00000417292 PRELPP51888 382 aa19.1■□□□□ 0.65
SSB-204ENST00000417292 FKBP8Q14318 412 aa19.1■□□□□ 0.65
SSB-204ENST00000417292 CDCA8Q53HL2 280 aa19.09■□□□□ 0.65
SSB-204ENST00000417292 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.65
SSB-204ENST00000417292 USP42Q9H9J4 1324 aaKnown RBP19.08■□□□□ 0.65
SSB-204ENST00000417292 SMC1BQ8NDV3 1235 aa19.08■□□□□ 0.64
SSB-204ENST00000417292 PTCD1O75127 700 aaKnown RBP19.07■□□□□ 0.64
SSB-204ENST00000417292 CRKLP46109 303 aaKnown RBP19.07■□□□□ 0.64
SSB-204ENST00000417292 HSP90AB1P08238 724 aaKnown RBP19.06■□□□□ 0.64
SSB-204ENST00000417292 CABP4P57796 275 aa19.06■□□□□ 0.64
SSB-204ENST00000417292 POLRMTO00411 1230 aaKnown RBP19.05■□□□□ 0.64
SSB-204ENST00000417292 RASSF7Q02833 373 aa19.05■□□□□ 0.64
SSB-204ENST00000417292 TM4SF1P30408 202 aa19.04■□□□□ 0.64
SSB-204ENST00000417292 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
SSB-204ENST00000417292 ADAMTS7Q9UKP4 1686 aa19.04■□□□□ 0.64
SSB-204ENST00000417292 HSPA1AP0DMV8 641 aaKnown RBP19.03■□□□□ 0.64
SSB-204ENST00000417292 HSPA1BP0DMV9 641 aaKnown RBP19.03■□□□□ 0.64
SSB-204ENST00000417292 TNNT2P45379 298 aaPredicted RBP19.03■□□□□ 0.64
SSB-204ENST00000417292 ZNF530Q6P9A1 599 aaPredicted RBP19.03■□□□□ 0.64
SSB-204ENST00000417292 TJP1Q07157 1748 aa19.03■□□□□ 0.64
SSB-204ENST00000417292 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
SSB-204ENST00000417292 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.64
SSB-204ENST00000417292 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
SSB-204ENST00000417292 GLTPD2A6NH11 291 aa19.01■□□□□ 0.63
SSB-204ENST00000417292 NFATC2IPQ8NCF5 419 aa19.01■□□□□ 0.63
SSB-204ENST00000417292 VEGFAP15692 232 aaPredicted RBP19■□□□□ 0.63
SSB-204ENST00000417292 MTHFSP49914 203 aa19■□□□□ 0.63
SSB-204ENST00000417292 LMNB1P20700 586 aa18.99■□□□□ 0.63
SSB-204ENST00000417292 USPL1Q5W0Q7 1092 aa18.99■□□□□ 0.63
SSB-204ENST00000417292 AMOTQ4VCS5 1084 aa18.98■□□□□ 0.63
SSB-204ENST00000417292 AEBP1Q8IUX7 1158 aa18.98■□□□□ 0.63
SSB-204ENST00000417292 POTECB2RU33 542 aa18.97■□□□□ 0.63
SSB-204ENST00000417292 AFDNP55196 1824 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms