RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 SMG6Q86US8 1419 aaKnown RBP12.47□□□□□ -0.41
SMIM12-201ENST00000417239 CYP27B1O15528 508 aa12.47□□□□□ -0.41
SMIM12-201ENST00000417239 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
SMIM12-201ENST00000417239 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
SMIM12-201ENST00000417239 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
SMIM12-201ENST00000417239 ANKRD26Q9UPS8 1709 aa12.47□□□□□ -0.41
SMIM12-201ENST00000417239 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
SMIM12-201ENST00000417239 GNPATO15228 680 aa12.46□□□□□ -0.41
SMIM12-201ENST00000417239 FCHSD2O94868 740 aa12.46□□□□□ -0.41
SMIM12-201ENST00000417239 SIK1P57059 783 aa12.46□□□□□ -0.41
SMIM12-201ENST00000417239 PIGBQ92521 554 aa12.46□□□□□ -0.41
SMIM12-201ENST00000417239 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.41
SMIM12-201ENST00000417239 DPEP1P16444 411 aa12.45□□□□□ -0.42
SMIM12-201ENST00000417239 KCNA3P22001 575 aa12.45□□□□□ -0.42
SMIM12-201ENST00000417239 ITPK1Q13572 414 aa12.45□□□□□ -0.42
SMIM12-201ENST00000417239 SMC1BQ8NDV3 1235 aa12.45□□□□□ -0.42
SMIM12-201ENST00000417239 COG3Q96JB2 828 aa12.45□□□□□ -0.42
SMIM12-201ENST00000417239 RRAGCQ9HB90 399 aa12.45□□□□□ -0.42
SMIM12-201ENST00000417239 NCAPD2Q15021 1401 aa12.44□□□□□ -0.42
SMIM12-201ENST00000417239 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
SMIM12-201ENST00000417239 DCAF5Q96JK2 942 aa12.43□□□□□ -0.42
SMIM12-201ENST00000417239 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
SMIM12-201ENST00000417239 INSRP06213 1382 aa12.43□□□□□ -0.42
SMIM12-201ENST00000417239 KDRP35968 1356 aa12.43□□□□□ -0.42
SMIM12-201ENST00000417239 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
SMIM12-201ENST00000417239 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
SMIM12-201ENST00000417239 NLGN1Q8N2Q7 840 aa12.42□□□□□ -0.42
SMIM12-201ENST00000417239 CCDC87Q9NVE4 849 aa12.42□□□□□ -0.42
SMIM12-201ENST00000417239 KDM6AO15550 1401 aaPredicted RBP12.42□□□□□ -0.42
SMIM12-201ENST00000417239 AFDNP55196 1824 aaKnown RBP12.41□□□□□ -0.42
SMIM12-201ENST00000417239 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
SMIM12-201ENST00000417239 TMF1P82094 1093 aa12.41□□□□□ -0.42
SMIM12-201ENST00000417239 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
SMIM12-201ENST00000417239 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
SMIM12-201ENST00000417239 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.42
SMIM12-201ENST00000417239 GYS1P13807 737 aa12.4□□□□□ -0.42
SMIM12-201ENST00000417239 ATP6V1AP38606 617 aa12.4□□□□□ -0.42
SMIM12-201ENST00000417239 FLT4P35916 1363 aa12.4□□□□□ -0.42
SMIM12-201ENST00000417239 TJP1Q07157 1748 aa12.4□□□□□ -0.43
SMIM12-201ENST00000417239 HSP90AB2PQ58FF8 381 aa12.39□□□□□ -0.43
SMIM12-201ENST00000417239 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
SMIM12-201ENST00000417239 PIM2Q9P1W9 311 aa12.39□□□□□ -0.43
SMIM12-201ENST00000417239 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
SMIM12-201ENST00000417239 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
SMIM12-201ENST00000417239 NRXN2Q9P2S2 1712 aa12.39□□□□□ -0.43
SMIM12-201ENST00000417239 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
SMIM12-201ENST00000417239 DALRD3Q5D0E6 543 aaKnown RBP12.38□□□□□ -0.43
SMIM12-201ENST00000417239 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
SMIM12-201ENST00000417239 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
SMIM12-201ENST00000417239 ADRA2BP18089 450 aa12.37□□□□□ -0.43
SMIM12-201ENST00000417239 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
SMIM12-201ENST00000417239 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
SMIM12-201ENST00000417239 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
SMIM12-201ENST00000417239 CARD11Q9BXL7 1154 aa12.36□□□□□ -0.43
SMIM12-201ENST00000417239 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
SMIM12-201ENST00000417239 TNRC18O15417 2968 aaPredicted RBP12.35□□□□□ -0.43
SMIM12-201ENST00000417239 GLTPD2A6NH11 291 aa12.35□□□□□ -0.43
SMIM12-201ENST00000417239 FYB1O15117 783 aa12.35□□□□□ -0.43
SMIM12-201ENST00000417239 VEGFAP15692 232 aaPredicted RBP12.35□□□□□ -0.43
SMIM12-201ENST00000417239 RASSF7Q02833 373 aa12.35□□□□□ -0.43
SMIM12-201ENST00000417239 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
SMIM12-201ENST00000417239 SPG7Q9UQ90 795 aa12.35□□□□□ -0.43
SMIM12-201ENST00000417239 FER1L6Q2WGJ9 1857 aa12.35□□□□□ -0.43
SMIM12-201ENST00000417239 TONSLQ96HA7 1378 aa12.34□□□□□ -0.43
SMIM12-201ENST00000417239 FOXN1O15353 648 aa12.34□□□□□ -0.43
SMIM12-201ENST00000417239 CHRNA5P30532 468 aa12.34□□□□□ -0.43
SMIM12-201ENST00000417239 RFC4P35249 363 aa12.34□□□□□ -0.43
SMIM12-201ENST00000417239 DDR1Q08345 913 aa12.34□□□□□ -0.43
SMIM12-201ENST00000417239 RC3H1Q5TC82 1133 aaKnown RBP12.34□□□□□ -0.43
SMIM12-201ENST00000417239 GGNBP2Q9H3C7 697 aa12.34□□□□□ -0.43
SMIM12-201ENST00000417239 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
SMIM12-201ENST00000417239 PHKG2P15735 406 aa12.33□□□□□ -0.44
SMIM12-201ENST00000417239 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
SMIM12-201ENST00000417239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMIM12-201ENST00000417239 CACNA1SQ13698 1873 aa12.33□□□□□ -0.44
SMIM12-201ENST00000417239 ANKRD31Q8N7Z5 1873 aa12.32□□□□□ -0.44
SMIM12-201ENST00000417239 POTECB2RU33 542 aa12.32□□□□□ -0.44
SMIM12-201ENST00000417239 LMNB1P20700 586 aa12.32□□□□□ -0.44
SMIM12-201ENST00000417239 TESK2Q96S53 571 aa12.32□□□□□ -0.44
SMIM12-201ENST00000417239 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
SMIM12-201ENST00000417239 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
SMIM12-201ENST00000417239 USP42Q9H9J4 1324 aaKnown RBP12.32□□□□□ -0.44
SMIM12-201ENST00000417239 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
SMIM12-201ENST00000417239 FKBP8Q14318 412 aa12.31□□□□□ -0.44
SMIM12-201ENST00000417239 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
SMIM12-201ENST00000417239 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
SMIM12-201ENST00000417239 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
SMIM12-201ENST00000417239 RBM42Q9BTD8 480 aaKnown RBP12.3□□□□□ -0.44
SMIM12-201ENST00000417239 SRP68Q9UHB9 627 aaKnown RBP12.3□□□□□ -0.44
SMIM12-201ENST00000417239 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
SMIM12-201ENST00000417239 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
SMIM12-201ENST00000417239 SCN4AP35499 1836 aa12.3□□□□□ -0.44
SMIM12-201ENST00000417239 CNTNAP1P78357 1384 aa12.3□□□□□ -0.44
SMIM12-201ENST00000417239 ARFGEF2Q9Y6D5 1785 aa12.29□□□□□ -0.44
SMIM12-201ENST00000417239 POLRMTO00411 1230 aaKnown RBP12.29□□□□□ -0.44
SMIM12-201ENST00000417239 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
SMIM12-201ENST00000417239 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
SMIM12-201ENST00000417239 THSD7BQ9C0I4 1608 aa12.27□□□□□ -0.44
SMIM12-201ENST00000417239 TM4SF1P30408 202 aa12.27□□□□□ -0.45
SMIM12-201ENST00000417239 EYA1Q99502 592 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms