RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 LINC00116Q8NCU8 138 aa18.53■□□□□ 0.56
SEC22C-204ENST00000416880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.52■□□□□ 0.56
SEC22C-204ENST00000416880 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
SEC22C-204ENST00000416880 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
SEC22C-204ENST00000416880 DIAPH1O60610 1272 aaKnown RBP18.51■□□□□ 0.55
SEC22C-204ENST00000416880 ITPK1Q13572 414 aa18.51■□□□□ 0.55
SEC22C-204ENST00000416880 GPR162Q16538 588 aa18.51■□□□□ 0.55
SEC22C-204ENST00000416880 AKAP4Q5JQC9 854 aa18.51■□□□□ 0.55
SEC22C-204ENST00000416880 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
SEC22C-204ENST00000416880 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
SEC22C-204ENST00000416880 CD2APQ9Y5K6 639 aa18.51■□□□□ 0.55
SEC22C-204ENST00000416880 UBR3Q6ZT12 1888 aa18.5■□□□□ 0.55
SEC22C-204ENST00000416880 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
SEC22C-204ENST00000416880 GNPATO15228 680 aa18.49■□□□□ 0.55
SEC22C-204ENST00000416880 MSL1Q68DK7 614 aa18.49■□□□□ 0.55
SEC22C-204ENST00000416880 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
SEC22C-204ENST00000416880 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
SEC22C-204ENST00000416880 PHF14O94880 888 aa18.48■□□□□ 0.55
SEC22C-204ENST00000416880 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
SEC22C-204ENST00000416880 CHD4Q14839 1912 aa18.47■□□□□ 0.55
SEC22C-204ENST00000416880 ADRA2BP18089 450 aa18.47■□□□□ 0.55
SEC22C-204ENST00000416880 TRAPPC3LQ5T215 181 aa18.47■□□□□ 0.55
SEC22C-204ENST00000416880 AMIGO3Q86WK7 504 aa18.47■□□□□ 0.55
SEC22C-204ENST00000416880 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
SEC22C-204ENST00000416880 NLGN2Q8NFZ4 835 aa18.46■□□□□ 0.55
SEC22C-204ENST00000416880 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
SEC22C-204ENST00000416880 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
SEC22C-204ENST00000416880 RPS6KA4O75676 772 aa18.45■□□□□ 0.54
SEC22C-204ENST00000416880 HMOX1P09601 288 aa18.45■□□□□ 0.54
SEC22C-204ENST00000416880 NLGN1Q8N2Q7 840 aa18.44■□□□□ 0.54
SEC22C-204ENST00000416880 SLC52A2Q9HAB3 445 aa18.44■□□□□ 0.54
SEC22C-204ENST00000416880 SCN11AQ9UI33 1791 aa18.43■□□□□ 0.54
SEC22C-204ENST00000416880 PTCD1O75127 700 aaKnown RBP18.43■□□□□ 0.54
SEC22C-204ENST00000416880 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
SEC22C-204ENST00000416880 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
SEC22C-204ENST00000416880 SMIM5Q71RC9 77 aa18.42■□□□□ 0.54
SEC22C-204ENST00000416880 PELP1Q8IZL8 1130 aaKnown RBP18.42■□□□□ 0.54
SEC22C-204ENST00000416880 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
SEC22C-204ENST00000416880 ARHGEF1Q92888 912 aaKnown RBP18.41■□□□□ 0.54
SEC22C-204ENST00000416880 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
SEC22C-204ENST00000416880 RFC4P35249 363 aa18.4■□□□□ 0.54
SEC22C-204ENST00000416880 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
SEC22C-204ENST00000416880 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
SEC22C-204ENST00000416880 GAS2L2Q8NHY3 880 aa18.39■□□□□ 0.53
SEC22C-204ENST00000416880 COL5A3P25940 1745 aaPredicted RBP18.39■□□□□ 0.53
SEC22C-204ENST00000416880 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
SEC22C-204ENST00000416880 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
SEC22C-204ENST00000416880 COL3A1P02461 1466 aaPredicted RBP18.38■□□□□ 0.53
SEC22C-204ENST00000416880 MMP10P09238 476 aa18.37■□□□□ 0.53
SEC22C-204ENST00000416880 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.539e-8■□□□□ 9.4
SEC22C-204ENST00000416880 CNGB1Q14028 1251 aaPredicted RBP18.37■□□□□ 0.53
SEC22C-204ENST00000416880 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
SEC22C-204ENST00000416880 MRC1P22897 1456 aa18.37■□□□□ 0.53
SEC22C-204ENST00000416880 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
SEC22C-204ENST00000416880 GYS1P13807 737 aa18.36■□□□□ 0.53
SEC22C-204ENST00000416880 MYH14Q7Z406 1995 aaKnown RBP18.36■□□□□ 0.53
SEC22C-204ENST00000416880 ADAMTS7Q9UKP4 1686 aa18.35■□□□□ 0.53
SEC22C-204ENST00000416880 GNAT3A8MTJ3 354 aa18.35■□□□□ 0.53
SEC22C-204ENST00000416880 TGFB2P61812 414 aa18.35■□□□□ 0.53
SEC22C-204ENST00000416880 UTRNP46939 3433 aa18.35■□□□□ 0.53
SEC22C-204ENST00000416880 INTS5Q6P9B9 1019 aaKnown RBP18.34■□□□□ 0.53
SEC22C-204ENST00000416880 CCDC87Q9NVE4 849 aa18.34■□□□□ 0.53
SEC22C-204ENST00000416880 PPP2R1AP30153 589 aa18.33■□□□□ 0.52
SEC22C-204ENST00000416880 TEFQ10587 303 aa18.33■□□□□ 0.52
SEC22C-204ENST00000416880 PARP3Q9Y6F1 533 aa18.33■□□□□ 0.52
SEC22C-204ENST00000416880 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.52
SEC22C-204ENST00000416880 CYP19A1P11511 503 aaPredicted RBP18.32■□□□□ 0.52
SEC22C-204ENST00000416880 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
SEC22C-204ENST00000416880 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
SEC22C-204ENST00000416880 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
SEC22C-204ENST00000416880 FCHSD2O94868 740 aa18.31■□□□□ 0.52
SEC22C-204ENST00000416880 TTC5Q8N0Z6 440 aa18.31■□□□□ 0.52
SEC22C-204ENST00000416880 IL17REQ8NFR9 667 aa18.31■□□□□ 0.52
SEC22C-204ENST00000416880 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
SEC22C-204ENST00000416880 TJP1Q07157 1748 aa18.31■□□□□ 0.52
SEC22C-204ENST00000416880 ZPR1O75312 459 aa18.3■□□□□ 0.52
SEC22C-204ENST00000416880 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
SEC22C-204ENST00000416880 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
SEC22C-204ENST00000416880 STARD3NLO95772 234 aa18.29■□□□□ 0.52
SEC22C-204ENST00000416880 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
SEC22C-204ENST00000416880 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
SEC22C-204ENST00000416880 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
SEC22C-204ENST00000416880 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
SEC22C-204ENST00000416880 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
SEC22C-204ENST00000416880 PHACTR3Q96KR7 559 aa18.28■□□□□ 0.52
SEC22C-204ENST00000416880 CEMIPQ8WUJ3 1361 aa18.28■□□□□ 0.52
SEC22C-204ENST00000416880 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
SEC22C-204ENST00000416880 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
SEC22C-204ENST00000416880 C10orf71Q711Q0 1435 aa18.27■□□□□ 0.52
SEC22C-204ENST00000416880 GOLGB1Q14789 3259 aaKnown RBP18.27■□□□□ 0.52
SEC22C-204ENST00000416880 SRP68Q9UHB9 627 aaKnown RBP18.27■□□□□ 0.52
SEC22C-204ENST00000416880 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
SEC22C-204ENST00000416880 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
SEC22C-204ENST00000416880 TM4SF1P30408 202 aa18.26■□□□□ 0.51
SEC22C-204ENST00000416880 FKBP8Q14318 412 aa18.26■□□□□ 0.51
SEC22C-204ENST00000416880 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
SEC22C-204ENST00000416880 A0A087WZG4 1122 aa18.25■□□□□ 0.51
SEC22C-204ENST00000416880 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
SEC22C-204ENST00000416880 PXDNLA1KZ92 1463 aa18.25■□□□□ 0.51
SEC22C-204ENST00000416880 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms