RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 PHF14O94880 888 aa18.25■□□□□ 0.51
LINC01398-201ENST00000416581 ADRA2BP18089 450 aa18.25■□□□□ 0.51
LINC01398-201ENST00000416581 MORC1Q86VD1 984 aa18.25■□□□□ 0.51
LINC01398-201ENST00000416581 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
LINC01398-201ENST00000416581 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
LINC01398-201ENST00000416581 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
LINC01398-201ENST00000416581 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
LINC01398-201ENST00000416581 KDRP35968 1356 aa18.24■□□□□ 0.51
LINC01398-201ENST00000416581 ASAP1Q9ULH1 1129 aa18.23■□□□□ 0.51
LINC01398-201ENST00000416581 RTCBQ9Y3I0 505 aaKnown RBP18.23■□□□□ 0.51
LINC01398-201ENST00000416581 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
LINC01398-201ENST00000416581 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
LINC01398-201ENST00000416581 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
LINC01398-201ENST00000416581 UTRNP46939 3433 aa18.22■□□□□ 0.51
LINC01398-201ENST00000416581 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
LINC01398-201ENST00000416581 COL5A3P25940 1745 aaPredicted RBP18.21■□□□□ 0.51
LINC01398-201ENST00000416581 CABP4P57796 275 aa18.21■□□□□ 0.51
LINC01398-201ENST00000416581 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
LINC01398-201ENST00000416581 NLGN1Q8N2Q7 840 aa18.21■□□□□ 0.51
LINC01398-201ENST00000416581 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
LINC01398-201ENST00000416581 ITPK1Q13572 414 aa18.2■□□□□ 0.5
LINC01398-201ENST00000416581 TRAPPC3LQ5T215 181 aa18.2■□□□□ 0.5
LINC01398-201ENST00000416581 MTHFSP49914 203 aa18.19■□□□□ 0.5
LINC01398-201ENST00000416581 KIF13BQ9NQT8 1826 aa18.19■□□□□ 0.5
LINC01398-201ENST00000416581 KDM6AO15550 1401 aaPredicted RBP18.18■□□□□ 0.5
LINC01398-201ENST00000416581 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
LINC01398-201ENST00000416581 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
LINC01398-201ENST00000416581 RPS6KA4O75676 772 aa18.16■□□□□ 0.5
LINC01398-201ENST00000416581 TGFB2P61812 414 aa18.16■□□□□ 0.5
LINC01398-201ENST00000416581 AMIGO3Q86WK7 504 aa18.16■□□□□ 0.5
LINC01398-201ENST00000416581 SCN11AQ9UI33 1791 aa18.16■□□□□ 0.5
LINC01398-201ENST00000416581 MMP10P09238 476 aa18.15■□□□□ 0.5
LINC01398-201ENST00000416581 RFC4P35249 363 aa18.15■□□□□ 0.5
LINC01398-201ENST00000416581 SULT6B1Q6IMI4 303 aa18.15■□□□□ 0.5
LINC01398-201ENST00000416581 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
LINC01398-201ENST00000416581 ADCY9O60503 1353 aa18.15■□□□□ 0.5
LINC01398-201ENST00000416581 GPBP1L1Q9HC44 474 aaPredicted RBP18.14■□□□□ 0.49
LINC01398-201ENST00000416581 C4AP0C0L4 1744 aa18.14■□□□□ 0.49
LINC01398-201ENST00000416581 AKAP4Q5JQC9 854 aa18.13■□□□□ 0.49
LINC01398-201ENST00000416581 C10orf71Q711Q0 1435 aa18.13■□□□□ 0.49
LINC01398-201ENST00000416581 IL13P35225 146 aa18.12■□□□□ 0.49
LINC01398-201ENST00000416581 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
LINC01398-201ENST00000416581 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
LINC01398-201ENST00000416581 AEBP1Q8IUX7 1158 aa18.11■□□□□ 0.49
LINC01398-201ENST00000416581 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
LINC01398-201ENST00000416581 MRC1P22897 1456 aa18.1■□□□□ 0.49
LINC01398-201ENST00000416581 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
LINC01398-201ENST00000416581 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
LINC01398-201ENST00000416581 TJP1Q07157 1748 aa18.09■□□□□ 0.49
LINC01398-201ENST00000416581 NPC1L1Q9UHC9 1359 aa18.09■□□□□ 0.49
LINC01398-201ENST00000416581 KIF7Q2M1P5 1343 aa18.09■□□□□ 0.49
LINC01398-201ENST00000416581 GYS1P13807 737 aa18.09■□□□□ 0.49
LINC01398-201ENST00000416581 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
LINC01398-201ENST00000416581 KIAA1551Q9HCM1 1747 aa18.09■□□□□ 0.49
LINC01398-201ENST00000416581 MYH14Q7Z406 1995 aaKnown RBP18.08■□□□□ 0.49
LINC01398-201ENST00000416581 PTCD1O75127 700 aaKnown RBP18.08■□□□□ 0.48
LINC01398-201ENST00000416581 CRKLP46109 303 aaKnown RBP18.08■□□□□ 0.48
LINC01398-201ENST00000416581 SMIM5Q71RC9 77 aa18.08■□□□□ 0.48
LINC01398-201ENST00000416581 SLC52A2Q9HAB3 445 aa18.07■□□□□ 0.48
LINC01398-201ENST00000416581 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
LINC01398-201ENST00000416581 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
LINC01398-201ENST00000416581 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
LINC01398-201ENST00000416581 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
LINC01398-201ENST00000416581 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
LINC01398-201ENST00000416581 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
LINC01398-201ENST00000416581 N4BP2Q86UW6 1770 aaPredicted RBP18.05■□□□□ 0.48
LINC01398-201ENST00000416581 GOLGB1Q14789 3259 aaKnown RBP18.04■□□□□ 0.48
LINC01398-201ENST00000416581 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
LINC01398-201ENST00000416581 BCS1LQ9Y276 419 aa18.04■□□□□ 0.48
LINC01398-201ENST00000416581 ZPR1O75312 459 aa18.03■□□□□ 0.48
LINC01398-201ENST00000416581 PER1O15534 1290 aaPredicted RBP18.02■□□□□ 0.48
LINC01398-201ENST00000416581 PIM2Q9P1W9 311 aa18.02■□□□□ 0.48
LINC01398-201ENST00000416581 CEP350Q5VT06 3117 aa18.02■□□□□ 0.47
LINC01398-201ENST00000416581 RNMTO43148 476 aaKnown RBP18.01■□□□□ 0.47
LINC01398-201ENST00000416581 FCHSD2O94868 740 aa18.01■□□□□ 0.47
LINC01398-201ENST00000416581 UBR2Q8IWV8 1755 aa18■□□□□ 0.47
LINC01398-201ENST00000416581 A0A0G2JLW4 131 aa18■□□□□ 0.47
LINC01398-201ENST00000416581 HMOX1P09601 288 aa18■□□□□ 0.47
LINC01398-201ENST00000416581 DPEP1P16444 411 aa18■□□□□ 0.47
LINC01398-201ENST00000416581 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
LINC01398-201ENST00000416581 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
LINC01398-201ENST00000416581 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
LINC01398-201ENST00000416581 WWC3Q9ULE0 1092 aa18■□□□□ 0.47
LINC01398-201ENST00000416581 SOS1Q07889 1333 aaPredicted RBP17.99■□□□□ 0.47
LINC01398-201ENST00000416581 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
LINC01398-201ENST00000416581 HSPA6P17066 643 aa17.99■□□□□ 0.47
LINC01398-201ENST00000416581 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
LINC01398-201ENST00000416581 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
LINC01398-201ENST00000416581 FKBP8Q14318 412 aa17.98■□□□□ 0.47
LINC01398-201ENST00000416581 DALRD3Q5D0E6 543 aaKnown RBP17.98■□□□□ 0.47
LINC01398-201ENST00000416581 ARHGAP27Q6ZUM4 889 aa17.98■□□□□ 0.47
LINC01398-201ENST00000416581 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
LINC01398-201ENST00000416581 COL15A1P39059 1388 aa17.98■□□□□ 0.47
LINC01398-201ENST00000416581 STARD3NLO95772 234 aa17.97■□□□□ 0.47
LINC01398-201ENST00000416581 CYP19A1P11511 503 aaPredicted RBP17.97■□□□□ 0.47
LINC01398-201ENST00000416581 TEFQ10587 303 aa17.97■□□□□ 0.47
LINC01398-201ENST00000416581 MTHFSDQ2M296 383 aaKnown RBP17.97■□□□□ 0.47
LINC01398-201ENST00000416581 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
LINC01398-201ENST00000416581 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
LINC01398-201ENST00000416581 SRP68Q9UHB9 627 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms