RNA–Protein interactions for RNA: ENST00000415889.2

LINC01260-201, Transcript of long intergenic non-protein coding RNA 1260, humanhuman

TSL 5 BASIC

Gene LINC01260, Length 1,416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01260-201ENST00000415889 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
LINC01260-201ENST00000415889 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
LINC01260-201ENST00000415889 CEP350Q5VT06 3117 aa11.48□□□□□ -0.57
LINC01260-201ENST00000415889 PHF14O94880 888 aa11.48□□□□□ -0.57
LINC01260-201ENST00000415889 MSL1Q68DK7 614 aa11.48□□□□□ -0.57
LINC01260-201ENST00000415889 KDRP35968 1356 aa11.47□□□□□ -0.57
LINC01260-201ENST00000415889 GNPATO15228 680 aa11.47□□□□□ -0.57
LINC01260-201ENST00000415889 ADRA2BP18089 450 aa11.47□□□□□ -0.57
LINC01260-201ENST00000415889 IL13P35225 146 aa11.47□□□□□ -0.57
LINC01260-201ENST00000415889 LINC00116Q8NCU8 138 aa11.47□□□□□ -0.57
LINC01260-201ENST00000415889 RTCBQ9Y3I0 505 aaKnown RBP11.47□□□□□ -0.57
LINC01260-201ENST00000415889 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
LINC01260-201ENST00000415889 TOGARAM1Q9Y4F4 1720 aa11.47□□□□□ -0.57
LINC01260-201ENST00000415889 TRAPPC3LQ5T215 181 aa11.46□□□□□ -0.57
LINC01260-201ENST00000415889 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
LINC01260-201ENST00000415889 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.57
LINC01260-201ENST00000415889 AKAP4Q5JQC9 854 aa11.45□□□□□ -0.58
LINC01260-201ENST00000415889 RC3H1Q5TC82 1133 aaKnown RBP11.45□□□□□ -0.58
LINC01260-201ENST00000415889 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
LINC01260-201ENST00000415889 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
LINC01260-201ENST00000415889 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
LINC01260-201ENST00000415889 ITGB4P16144 1822 aa11.45□□□□□ -0.58
LINC01260-201ENST00000415889 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
LINC01260-201ENST00000415889 DIAPH1O60610 1272 aaKnown RBP11.44□□□□□ -0.58
LINC01260-201ENST00000415889 ITPK1Q13572 414 aa11.44□□□□□ -0.58
LINC01260-201ENST00000415889 NLGN1Q8N2Q7 840 aa11.44□□□□□ -0.58
LINC01260-201ENST00000415889 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
LINC01260-201ENST00000415889 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
LINC01260-201ENST00000415889 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
LINC01260-201ENST00000415889 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
LINC01260-201ENST00000415889 RFC4P35249 363 aa11.43□□□□□ -0.58
LINC01260-201ENST00000415889 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
LINC01260-201ENST00000415889 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
LINC01260-201ENST00000415889 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
LINC01260-201ENST00000415889 CFAP53Q96M91 514 aa11.42□□□□□ -0.58
LINC01260-201ENST00000415889 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
LINC01260-201ENST00000415889 SLC52A2Q9HAB3 445 aa11.41□□□□□ -0.58
LINC01260-201ENST00000415889 ZNF831Q5JPB2 1677 aa11.4□□□□□ -0.58
LINC01260-201ENST00000415889 MMP10P09238 476 aa11.4□□□□□ -0.58
LINC01260-201ENST00000415889 HMOX1P09601 288 aa11.4□□□□□ -0.58
LINC01260-201ENST00000415889 AMIGO3Q86WK7 504 aa11.4□□□□□ -0.58
LINC01260-201ENST00000415889 U2SURPO15042 1029 aaKnown RBP11.39□□□□□ -0.59
LINC01260-201ENST00000415889 YBX3P16989 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC01260-201ENST00000415889 HSPA6P17066 643 aa11.39□□□□□ -0.59
LINC01260-201ENST00000415889 TGFB2P61812 414 aa11.39□□□□□ -0.59
LINC01260-201ENST00000415889 GAS2L2Q8NHY3 880 aa11.39□□□□□ -0.59
LINC01260-201ENST00000415889 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
LINC01260-201ENST00000415889 SLC4A9Q96Q91 983 aa11.39□□□□□ -0.59
LINC01260-201ENST00000415889 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
LINC01260-201ENST00000415889 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
LINC01260-201ENST00000415889 UBR3Q6ZT12 1888 aa11.39□□□□□ -0.59
LINC01260-201ENST00000415889 RNMTO43148 476 aaKnown RBP11.38□□□□□ -0.59
LINC01260-201ENST00000415889 CRKLP46109 303 aaKnown RBP11.38□□□□□ -0.59
LINC01260-201ENST00000415889 NUDCQ9Y266 331 aa11.38□□□□□ -0.59
LINC01260-201ENST00000415889 MTHFSDQ2M296 383 aaKnown RBP11.37□□□□□ -0.59
LINC01260-201ENST00000415889 SMIM5Q71RC9 77 aa11.37□□□□□ -0.59
LINC01260-201ENST00000415889 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
LINC01260-201ENST00000415889 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
LINC01260-201ENST00000415889 ZPR1O75312 459 aa11.36□□□□□ -0.59
LINC01260-201ENST00000415889 GYS1P13807 737 aa11.36□□□□□ -0.59
LINC01260-201ENST00000415889 TEFQ10587 303 aa11.36□□□□□ -0.59
LINC01260-201ENST00000415889 GNAT3A8MTJ3 354 aa11.35□□□□□ -0.59
LINC01260-201ENST00000415889 CNGB1Q14028 1251 aaPredicted RBP11.35□□□□□ -0.59
LINC01260-201ENST00000415889 LGR6Q9HBX8 967 aa11.35□□□□□ -0.59
LINC01260-201ENST00000415889 MRC1P22897 1456 aa11.35□□□□□ -0.59
LINC01260-201ENST00000415889 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
LINC01260-201ENST00000415889 STARD3NLO95772 234 aa11.35□□□□□ -0.59
LINC01260-201ENST00000415889 TEX13AQ9BXU3 409 aaPredicted RBP11.35□□□□□ -0.59
LINC01260-201ENST00000415889 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
LINC01260-201ENST00000415889 GOLGB1Q14789 3259 aaKnown RBP11.35□□□□□ -0.59
LINC01260-201ENST00000415889 NPM2Q86SE8 214 aaKnown RBP11.34□□□□□ -0.59
LINC01260-201ENST00000415889 DNAJC10Q8IXB1 793 aa11.34□□□□□ -0.59
LINC01260-201ENST00000415889 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
LINC01260-201ENST00000415889 COL5A3P25940 1745 aaPredicted RBP11.33□□□□□ -0.6
LINC01260-201ENST00000415889 A0A087WZG4 1122 aa11.33□□□□□ -0.6
LINC01260-201ENST00000415889 NEFMP07197 916 aa11.33□□□□□ -0.6
LINC01260-201ENST00000415889 CYP19A1P11511 503 aaPredicted RBP11.33□□□□□ -0.6
LINC01260-201ENST00000415889 INTS5Q6P9B9 1019 aaKnown RBP11.33□□□□□ -0.6
LINC01260-201ENST00000415889 CICQ96RK0 1608 aaPredicted RBP11.32□□□□□ -0.6
LINC01260-201ENST00000415889 COL3A1P02461 1466 aaPredicted RBP11.32□□□□□ -0.6
LINC01260-201ENST00000415889 SOS1Q07889 1333 aaPredicted RBP11.32□□□□□ -0.6
LINC01260-201ENST00000415889 ATP10DQ9P241 1426 aa11.32□□□□□ -0.6
LINC01260-201ENST00000415889 SLC39A6Q13433 755 aa11.32□□□□□ -0.6
LINC01260-201ENST00000415889 RTF1Q92541 710 aaKnown RBP11.32□□□□□ -0.6
LINC01260-201ENST00000415889 NARFQ9UHQ1 456 aa11.32□□□□□ -0.6
LINC01260-201ENST00000415889 BCS1LQ9Y276 419 aa11.32□□□□□ -0.6
LINC01260-201ENST00000415889 SCN11AQ9UI33 1791 aa11.32□□□□□ -0.6
LINC01260-201ENST00000415889 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
LINC01260-201ENST00000415889 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
LINC01260-201ENST00000415889 FCHSD2O94868 740 aa11.31□□□□□ -0.6
LINC01260-201ENST00000415889 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
LINC01260-201ENST00000415889 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
LINC01260-201ENST00000415889 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC01260-201ENST00000415889 FKBP8Q14318 412 aa11.31□□□□□ -0.6
LINC01260-201ENST00000415889 ZNF790Q6PG37 636 aa11.31□□□□□ -0.6
LINC01260-201ENST00000415889 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
LINC01260-201ENST00000415889 C4AP0C0L4 1744 aa11.3□□□□□ -0.6
LINC01260-201ENST00000415889 DPEP1P16444 411 aa11.3□□□□□ -0.6
LINC01260-201ENST00000415889 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
LINC01260-201ENST00000415889 USPL1Q5W0Q7 1092 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms