RNA–Protein interactions for RNA: ENST00000415763.5

COL20A1-202, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-202ENST00000415763 SLC16A10Q8TF71 515 aa26.29■■□□□ 1.8
COL20A1-202ENST00000415763 TAF1LQ8IZX4 1826 aa26.29■■□□□ 1.8
COL20A1-202ENST00000415763 C4BP0C0L5 1744 aa26.28■■□□□ 1.8
COL20A1-202ENST00000415763 RNMTO43148 476 aaKnown RBP26.28■■□□□ 1.8
COL20A1-202ENST00000415763 ATP6V1AP38606 617 aa26.28■■□□□ 1.8
COL20A1-202ENST00000415763 DDX10Q13206 875 aaKnown RBP26.27■■□□□ 1.8
COL20A1-202ENST00000415763 PHACTR3Q96KR7 559 aa26.27■■□□□ 1.8
COL20A1-202ENST00000415763 RSPH6AQ9H0K4 717 aa26.27■■□□□ 1.8
COL20A1-202ENST00000415763 CFAP53Q96M91 514 aa26.26■■□□□ 1.79
COL20A1-202ENST00000415763 RBM42Q9BTD8 480 aaKnown RBP26.26■■□□□ 1.79
COL20A1-202ENST00000415763 FHDC1Q9C0D6 1143 aaPredicted RBP26.26■■□□□ 1.79
COL20A1-202ENST00000415763 ARXQ96QS3 562 aa26.25■■□□□ 1.79
COL20A1-202ENST00000415763 MSH5O43196 834 aa26.24■■□□□ 1.79
COL20A1-202ENST00000415763 AK7Q96M32 723 aa26.24■■□□□ 1.79
COL20A1-202ENST00000415763 SLC52A2Q9HAB3 445 aa26.24■■□□□ 1.79
COL20A1-202ENST00000415763 PTCD1O75127 700 aaKnown RBP26.23■■□□□ 1.79
COL20A1-202ENST00000415763 PRKAR2BP31323 418 aa26.23■■□□□ 1.79
COL20A1-202ENST00000415763 MSL1Q68DK7 614 aa26.23■■□□□ 1.79
COL20A1-202ENST00000415763 COL24A1Q17RW2 1714 aa26.22■■□□□ 1.79
COL20A1-202ENST00000415763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.22■■□□□ 1.79
COL20A1-202ENST00000415763 PHF14O94880 888 aa26.22■■□□□ 1.79
COL20A1-202ENST00000415763 IL17REQ8NFR9 667 aa26.22■■□□□ 1.79
COL20A1-202ENST00000415763 SYT17Q9BSW7 474 aa26.22■■□□□ 1.79
COL20A1-202ENST00000415763 MRC1P22897 1456 aa26.22■■□□□ 1.79
COL20A1-202ENST00000415763 ADAMTS7Q9UKP4 1686 aa26.22■■□□□ 1.79
COL20A1-202ENST00000415763 SCN11AQ9UI33 1791 aa26.21■■□□□ 1.79
COL20A1-202ENST00000415763 U2AF1L5P0DN76 240 aaPredicted RBP26.2■■□□□ 1.78
COL20A1-202ENST00000415763 U2AF1Q01081 240 aaKnown RBP eCLIP26.2■■□□□ 1.78
COL20A1-202ENST00000415763 SLC39A6Q13433 755 aa26.2■■□□□ 1.78
COL20A1-202ENST00000415763 GNPATO15228 680 aa26.19■■□□□ 1.78
COL20A1-202ENST00000415763 FLAD1Q8NFF5 587 aa26.18■■□□□ 1.78
COL20A1-202ENST00000415763 NUDCQ9Y266 331 aa26.18■■□□□ 1.78
COL20A1-202ENST00000415763 UBR3Q6ZT12 1888 aa26.17■■□□□ 1.78
COL20A1-202ENST00000415763 SSFA2P28290 1259 aa26.17■■□□□ 1.78
COL20A1-202ENST00000415763 MAP3K5Q99683 1374 aa26.17■■□□□ 1.78
COL20A1-202ENST00000415763 GAS2L2Q8NHY3 880 aa26.16■■□□□ 1.78
COL20A1-202ENST00000415763 ZNF831Q5JPB2 1677 aa26.15■■□□□ 1.78
COL20A1-202ENST00000415763 GNAT3A8MTJ3 354 aa26.15■■□□□ 1.78
COL20A1-202ENST00000415763 HMGB2P26583 209 aaKnown RBP26.15■■□□□ 1.78
COL20A1-202ENST00000415763 RC3H1Q5TC82 1133 aaKnown RBP26.15■■□□□ 1.78
COL20A1-202ENST00000415763 FCHSD2O94868 740 aa26.14■■□□□ 1.78
COL20A1-202ENST00000415763 POLD1P28340 1107 aa26.14■■□□□ 1.78
COL20A1-202ENST00000415763 CNTNAP4Q9C0A0 1308 aa26.14■■□□□ 1.77
COL20A1-202ENST00000415763 KCPQ6ZWJ8 1503 aa26.13■■□□□ 1.77
COL20A1-202ENST00000415763 DNAJC10Q8IXB1 793 aa26.12■■□□□ 1.77
COL20A1-202ENST00000415763 COL5A3P25940 1745 aaPredicted RBP26.11■■□□□ 1.77
COL20A1-202ENST00000415763 CEMIPQ8WUJ3 1361 aa26.11■■□□□ 1.77
COL20A1-202ENST00000415763 UTRNP46939 3433 aa26.11■■□□□ 1.77
COL20A1-202ENST00000415763 CRKLP46109 303 aaKnown RBP26.11■■□□□ 1.77
COL20A1-202ENST00000415763 INTS5Q6P9B9 1019 aaKnown RBP26.11■■□□□ 1.77
COL20A1-202ENST00000415763 TJP1Q07157 1748 aa26.11■■□□□ 1.77
COL20A1-202ENST00000415763 RPS6KA4O75676 772 aa26.1■■□□□ 1.77
COL20A1-202ENST00000415763 NLGN2Q8NFZ4 835 aa26.1■■□□□ 1.77
COL20A1-202ENST00000415763 ARHGEF1Q92888 912 aaKnown RBP26.1■■□□□ 1.77
COL20A1-202ENST00000415763 RALBP1Q15311 655 aa26.09■■□□□ 1.77
COL20A1-202ENST00000415763 RTCBQ9Y3I0 505 aaKnown RBP26.09■■□□□ 1.77
COL20A1-202ENST00000415763 KLHL34Q8N239 644 aa26.08■■□□□ 1.77
COL20A1-202ENST00000415763 PLEKHF1Q96S99 279 aa26.08■■□□□ 1.77
COL20A1-202ENST00000415763 MYH14Q7Z406 1995 aaKnown RBP26.07■■□□□ 1.76
COL20A1-202ENST00000415763 TRAPPC3LQ5T215 181 aa26.07■■□□□ 1.76
COL20A1-202ENST00000415763 GOLGB1Q14789 3259 aaKnown RBP26.06■■□□□ 1.76
COL20A1-202ENST00000415763 KCNQ3O43525 872 aa26.06■■□□□ 1.76
COL20A1-202ENST00000415763 CYP19A1P11511 503 aaPredicted RBP26.06■■□□□ 1.76
COL20A1-202ENST00000415763 DCTN1Q14203 1278 aa26.06■■□□□ 1.76
COL20A1-202ENST00000415763 MCM10Q7L590 875 aa26.06■■□□□ 1.76
COL20A1-202ENST00000415763 CICQ96RK0 1608 aaPredicted RBP26.06■■□□□ 1.76
COL20A1-202ENST00000415763 VIRMAQ69YN4 1812 aaKnown RBP26.05■■□□□ 1.76
COL20A1-202ENST00000415763 TEFQ10587 303 aa26.05■■□□□ 1.76
COL20A1-202ENST00000415763 ZNF496Q96IT1 587 aaPredicted RBP26.04■■□□□ 1.76
COL20A1-202ENST00000415763 ZNF790Q6PG37 636 aa26.03■■□□□ 1.76
COL20A1-202ENST00000415763 GYS1P13807 737 aa26.02■■□□□ 1.76
COL20A1-202ENST00000415763 ADRA2BP18089 450 aa26.02■■□□□ 1.76
COL20A1-202ENST00000415763 ZEB1P37275 1124 aaPredicted RBP26.02■■□□□ 1.76
COL20A1-202ENST00000415763 SRP68Q9UHB9 627 aaKnown RBP26.02■■□□□ 1.76
COL20A1-202ENST00000415763 SIPA1L3O60292 1781 aaPredicted RBP26.01■■□□□ 1.75
COL20A1-202ENST00000415763 CCDC87Q9NVE4 849 aa26.01■■□□□ 1.75
COL20A1-202ENST00000415763 UBR2Q8IWV8 1755 aa26■■□□□ 1.75
COL20A1-202ENST00000415763 MYBBP1AQ9BQG0 1328 aaKnown RBP26■■□□□ 1.75
COL20A1-202ENST00000415763 VSIG10Q8N0Z9 540 aa26■■□□□ 1.75
COL20A1-202ENST00000415763 ZBTB1Q9Y2K1 713 aa25.99■■□□□ 1.75
COL20A1-202ENST00000415763 SOS1Q07889 1333 aaPredicted RBP25.98■■□□□ 1.75
COL20A1-202ENST00000415763 MMP10P09238 476 aa25.98■■□□□ 1.75
COL20A1-202ENST00000415763 RFC4P35249 363 aa25.98■■□□□ 1.75
COL20A1-202ENST00000415763 HEG1Q9ULI3 1381 aa25.97■■□□□ 1.75
COL20A1-202ENST00000415763 BTBD11A6QL63 1104 aa25.97■■□□□ 1.75
COL20A1-202ENST00000415763 TTC5Q8N0Z6 440 aa25.97■■□□□ 1.75
COL20A1-202ENST00000415763 PRKRIP1Q9H875 184 aaPredicted RBP25.97■■□□□ 1.75
COL20A1-202ENST00000415763 HTATSF1O43719 755 aaKnown RBP25.96■■□□□ 1.75
COL20A1-202ENST00000415763 RTF1Q92541 710 aaKnown RBP25.96■■□□□ 1.75
COL20A1-202ENST00000415763 CD2APQ9Y5K6 639 aa25.96■■□□□ 1.75
COL20A1-202ENST00000415763 USP42Q9H9J4 1324 aaKnown RBP25.95■■□□□ 1.75
COL20A1-202ENST00000415763 C4AP0C0L4 1744 aa25.95■■□□□ 1.74
COL20A1-202ENST00000415763 FKBP8Q14318 412 aa25.95■■□□□ 1.74
COL20A1-202ENST00000415763 NFE2L2Q16236 605 aa25.95■■□□□ 1.74
COL20A1-202ENST00000415763 PRAMEF22A3QJZ6 481 aa25.94■■□□□ 1.74
COL20A1-202ENST00000415763 YBX3P16989 372 aaKnown RBP eCLIP25.94■■□□□ 1.74
COL20A1-202ENST00000415763 NLGN1Q8N2Q7 840 aa25.94■■□□□ 1.74
COL20A1-202ENST00000415763 THUMPD2Q9BTF0 503 aaKnown RBP25.94■■□□□ 1.74
COL20A1-202ENST00000415763 DCAF8L1A6NGE4 600 aa25.93■■□□□ 1.74
COL20A1-202ENST00000415763 MIS18AQ9NYP9 233 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms