RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
SCN4B-202ENST00000415030 DCTN1Q14203 1278 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 MEIS3Q99687 375 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 BECN2A8MW95 431 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 PKP1Q13835 747 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
SCN4B-202ENST00000415030 IDI1Q13907 227 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
SCN4B-202ENST00000415030 SURF6O75683 361 aaKnown RBP13.84□□□□□ -0.19
SCN4B-202ENST00000415030 PSMA5P28066 241 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 TPM4P67936 248 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 CCDC112Q8NEF3 446 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 BICD2Q8TD16 824 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 STX6O43752 255 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.2
SCN4B-202ENST00000415030 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
SCN4B-202ENST00000415030 NLRP6P59044 892 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 NUP62CLQ9H1M0 184 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 CYP46A1Q9Y6A2 500 aa13.83□□□□□ -0.2
SCN4B-202ENST00000415030 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
SCN4B-202ENST00000415030 MAP3K11Q16584 847 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 TPD52L1Q16890 204 aaPredicted RBP13.82□□□□□ -0.2
SCN4B-202ENST00000415030 SIRT2Q8IXJ6 389 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 MYOM1P52179 1685 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 RAB11FIP3O75154 756 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 SH2B1Q9NRF2 756 aaPredicted RBP13.82□□□□□ -0.2
SCN4B-202ENST00000415030 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 ARAP3Q8WWN8 1544 aa13.82□□□□□ -0.2
SCN4B-202ENST00000415030 RRS1Q15050 365 aaKnown RBP13.82□□□□□ -0.2
SCN4B-202ENST00000415030 OTUD7AQ8TE49 926 aaPredicted RBP13.82□□□□□ -0.2
SCN4B-202ENST00000415030 TTC12Q9H892 705 aaPredicted RBP13.82□□□□□ -0.2
SCN4B-202ENST00000415030 H3BQV1 296 aa13.81□□□□□ -0.2
SCN4B-202ENST00000415030 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
SCN4B-202ENST00000415030 SYTL4Q96C24 671 aaPredicted RBP13.81□□□□□ -0.2
SCN4B-202ENST00000415030 TNMDQ9H2S6 317 aa13.81□□□□□ -0.2
SCN4B-202ENST00000415030 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
SCN4B-202ENST00000415030 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
SCN4B-202ENST00000415030 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
SCN4B-202ENST00000415030 KDM4AO75164 1064 aa13.81□□□□□ -0.2
SCN4B-202ENST00000415030 NUTM2AQ8IVF1 878 aaPredicted RBP13.81□□□□□ -0.2
SCN4B-202ENST00000415030 ZNF830Q96NB3 372 aaPredicted RBP13.81□□□□□ -0.2
SCN4B-202ENST00000415030 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
SCN4B-202ENST00000415030 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
SCN4B-202ENST00000415030 RIMS2Q9UQ26 1411 aa13.81□□□□□ -0.2
SCN4B-202ENST00000415030 IFIT2P09913 472 aaKnown RBP13.8□□□□□ -0.2
SCN4B-202ENST00000415030 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 NME9Q86XW9 330 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 HIP1O00291 1037 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 CLASRPQ8N2M8 674 aaKnown RBP13.8□□□□□ -0.2
SCN4B-202ENST00000415030 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
SCN4B-202ENST00000415030 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 MCM10Q7L590 875 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 CGNQ9P2M7 1197 aaKnown RBP13.79□□□□□ -0.2
SCN4B-202ENST00000415030 MED14O60244 1454 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 KIF20AO95235 890 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 CHMLP26374 656 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
SCN4B-202ENST00000415030 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
SCN4B-202ENST00000415030 SSH2Q76I76 1423 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
SCN4B-202ENST00000415030 IL13P35225 146 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 NPATQ14207 1427 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 MSH6P52701 1360 aa13.79□□□□□ -0.2
SCN4B-202ENST00000415030 CUL4AQ13619 759 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
SCN4B-202ENST00000415030 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 KIF1BPQ96EK5 621 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 OSBPL3Q9H4L5 887 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 FEZ1Q99689 392 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 NLRP2Q9NX02 1062 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 FAM135BQ49AJ0 1406 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 F13A1P00488 732 aa13.78□□□□□ -0.2
SCN4B-202ENST00000415030 SCAND2PQ9GZW5 306 aaPredicted RBP13.78□□□□□ -0.2
SCN4B-202ENST00000415030 F6X3S4 739 aa13.77□□□□□ -0.2
SCN4B-202ENST00000415030 CASTP20810 708 aaKnown RBP13.77□□□□□ -0.2
SCN4B-202ENST00000415030 NECTIN2Q92692 538 aa13.77□□□□□ -0.2
SCN4B-202ENST00000415030 IL1RAPL2Q9NP60 686 aa13.77□□□□□ -0.2
SCN4B-202ENST00000415030 QRICH2Q9H0J4 1663 aa13.77□□□□□ -0.2
SCN4B-202ENST00000415030 FAM200AQ8TCP9 573 aa13.77□□□□□ -0.21
SCN4B-202ENST00000415030 RTL1A6NKG5 1358 aa13.77□□□□□ -0.21
SCN4B-202ENST00000415030 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.21
SCN4B-202ENST00000415030 JAKMIP1Q96N16 626 aaKnown RBP13.77□□□□□ -0.21
SCN4B-202ENST00000415030 PAXBP1Q9Y5B6 917 aa13.77□□□□□ -0.21
SCN4B-202ENST00000415030 NRXN1Q9ULB1 1477 aa13.76□□□□□ -0.21
SCN4B-202ENST00000415030 GIMAP6Q6P9H5 292 aa13.76□□□□□ -0.21
SCN4B-202ENST00000415030 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms