RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 GPC1P35052 558 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 RIPOR1Q6ZS17 1223 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 CD163Q86VB7 1156 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 TRIM52Q96A61 297 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 CFHR5Q9BXR6 569 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 TRIM34Q9BYJ4 488 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 SEMA6BQ9H3T3 888 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 FKBPLQ9UIM3 349 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 SHISA8B8ZZ34 492 aa5.26□□□□□ -1.57
SF3B1-203ENST00000414174 ZBTB33Q86T24 672 aa5.26□□□□□ -1.57
SF3B1-203ENST00000414174 TICAM2Q86XR7 235 aa5.26□□□□□ -1.57
SF3B1-203ENST00000414174 IL27Q8NEV9 243 aa5.26□□□□□ -1.57
SF3B1-203ENST00000414174 GOPCQ9HD26 462 aa5.26□□□□□ -1.57
SF3B1-203ENST00000414174 GDF2Q9UK05 429 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-203ENST00000414174 GPR37L1O60883 481 aa5.25□□□□□ -1.57
SF3B1-203ENST00000414174 RHOQP17081 205 aa5.25□□□□□ -1.57
SF3B1-203ENST00000414174 HOXB4P17483 251 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-203ENST00000414174 ZNF784Q8NCA9 323 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-203ENST00000414174 EDARADDQ8WWZ3 215 aa5.25□□□□□ -1.57
SF3B1-203ENST00000414174 ZMYND15Q9H091 742 aa5.25□□□□□ -1.57
SF3B1-203ENST00000414174 TMPRSS4Q9NRS4 437 aa5.25□□□□□ -1.57
SF3B1-203ENST00000414174 GRIN2CQ14957 1233 aa5.24□□□□□ -1.57
SF3B1-203ENST00000414174 WDR44Q5JSH3 913 aa5.24□□□□□ -1.57
SF3B1-203ENST00000414174 C1orf229Q6ZS94 237 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-203ENST00000414174 KLRG1Q96E93 195 aa5.24□□□□□ -1.57
SF3B1-203ENST00000414174 GJD4Q96KN9 370 aaPredicted RBP5.24□□□□□ -1.57
SF3B1-203ENST00000414174 RRAGCQ9HB90 399 aa5.24□□□□□ -1.57
SF3B1-203ENST00000414174 GPSM3Q9Y4H4 160 aa5.24□□□□□ -1.57
SF3B1-203ENST00000414174 ZC3H4Q9UPT8 1303 aaKnown RBP5.23□□□□□ -1.57
SF3B1-203ENST00000414174 GNB5O14775 395 aa5.23□□□□□ -1.57
SF3B1-203ENST00000414174 NBPF20Q3BBV1 942 aa5.23□□□□□ -1.57
SF3B1-203ENST00000414174 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
SF3B1-203ENST00000414174 SUV39H2Q9H5I1 410 aa5.23□□□□□ -1.57
SF3B1-203ENST00000414174 ERVH48-1M5A8F1 160 aa5.22□□□□□ -1.57
SF3B1-203ENST00000414174 CLSTN1O94985 981 aa5.22□□□□□ -1.57
SF3B1-203ENST00000414174 PTK2Q05397 1052 aa5.22□□□□□ -1.57
SF3B1-203ENST00000414174 GOLGA6L1Q8N7Z2 621 aa5.22□□□□□ -1.57
SF3B1-203ENST00000414174 RGS22Q8NE09 1264 aa5.22□□□□□ -1.57
SF3B1-203ENST00000414174 ADAM32Q8TC27 787 aa5.22□□□□□ -1.57
SF3B1-203ENST00000414174 PCMTD1Q96MG8 357 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-203ENST00000414174 GAS2L1Q99501 681 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-203ENST00000414174 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.22□□□□□ -1.57
SF3B1-203ENST00000414174 F11P03951 625 aa5.21□□□□□ -1.58
SF3B1-203ENST00000414174 CHRNA4P43681 627 aa5.21□□□□□ -1.58
SF3B1-203ENST00000414174 POU4F2Q12837 409 aa5.21□□□□□ -1.58
SF3B1-203ENST00000414174 DOC2BQ14184 412 aa5.21□□□□□ -1.58
SF3B1-203ENST00000414174 ARTNQ5T4W7 220 aa5.21□□□□□ -1.58
SF3B1-203ENST00000414174 CC2D2BQ6DHV5 1058 aa5.21□□□□□ -1.58
SF3B1-203ENST00000414174 NUCKS1Q9H1E3 243 aaKnown RBP5.21□□□□□ -1.58
SF3B1-203ENST00000414174 GOLGA2P5Q9HBQ8 144 aa5.21□□□□□ -1.58
SF3B1-203ENST00000414174 NOP53Q9NZM5 478 aaKnown RBP5.21□□□□□ -1.58
SF3B1-203ENST00000414174 ESPNB1AK53 854 aa5.2□□□□□ -1.58
SF3B1-203ENST00000414174 ZFP64Q9NPA5 681 aa5.2□□□□□ -1.58
SF3B1-203ENST00000414174 ATP1B4Q9UN42 357 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-203ENST00000414174 PHF24Q9UPV7 400 aa5.2□□□□□ -1.58
SF3B1-203ENST00000414174 SPATA31C2B4DYI2 1134 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 RAD21O60216 631 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 AAMPQ13685 434 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 FOXD4L6Q3SYB3 417 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-203ENST00000414174 NBPF10Q6P3W6 841 aaKnown RBP5.19□□□□□ -1.58
SF3B1-203ENST00000414174 FOXD4L3Q6VB84 417 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-203ENST00000414174 SEPT12Q8IYM1 358 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 NBPF15Q8N660 670 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 MTMR14Q8NCE2 650 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 BTBD6Q96KE9 485 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 GRIP2Q9C0E4 1043 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 C1orf115Q9H7X2 142 aa5.19□□□□□ -1.58
SF3B1-203ENST00000414174 SCO2A0A1W2PP80 73 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 A0A1W2PRU2 124 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 ATP5J2-PTCD1G3V325 749 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 GATA4P43694 442 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 TMEM259Q4ZIN3 620 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 ZNF592Q92610 1267 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 PSMD1Q99460 953 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 SNRKQ9NRH2 765 aa5.18□□□□□ -1.58
SF3B1-203ENST00000414174 FBXO45P0C2W1 286 aa5.17□□□□□ -1.58
SF3B1-203ENST00000414174 AMPD1P23109 780 aa5.17□□□□□ -1.58
SF3B1-203ENST00000414174 ZEB1P37275 1124 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-203ENST00000414174 LBRQ14739 615 aaKnown RBP5.17□□□□□ -1.58
SF3B1-203ENST00000414174 RSPO4Q2I0M5 234 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-203ENST00000414174 NKAPLQ5M9Q1 402 aa5.17□□□□□ -1.58
SF3B1-203ENST00000414174 SLCO4C1Q6ZQN7 724 aa5.17□□□□□ -1.58
SF3B1-203ENST00000414174 CCDC125Q86Z20 511 aa5.17□□□□□ -1.58
SF3B1-203ENST00000414174 NAP1L5Q96NT1 182 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-203ENST00000414174 TIMMDC1Q9NPL8 285 aa5.17□□□□□ -1.58
SF3B1-203ENST00000414174 THBS1P07996 1170 aa5.16□□□□□ -1.58
SF3B1-203ENST00000414174 DGKGP49619 791 aa5.16□□□□□ -1.58
SF3B1-203ENST00000414174 SLC27A3Q5K4L6 730 aa5.16□□□□□ -1.58
SF3B1-203ENST00000414174 NBPF11Q86T75 865 aa5.16□□□□□ -1.58
SF3B1-203ENST00000414174 MEN1O00255 615 aa5.15□□□□□ -1.59
SF3B1-203ENST00000414174 EPXP11678 715 aa5.15□□□□□ -1.59
SF3B1-203ENST00000414174 RAB15P59190 212 aa5.15□□□□□ -1.59
SF3B1-203ENST00000414174 TAS1R3Q7RTX0 852 aa5.15□□□□□ -1.59
SF3B1-203ENST00000414174 NLRP3Q96P20 1036 aa5.15□□□□□ -1.59
SF3B1-203ENST00000414174 CYLDQ9NQC7 956 aa5.15□□□□□ -1.59
SF3B1-203ENST00000414174 BRPF3Q9ULD4 1205 aa5.15□□□□□ -1.59
SF3B1-203ENST00000414174 ZBBXA8MT70 800 aa5.14□□□□□ -1.59
SF3B1-203ENST00000414174 WASLO00401 505 aaPredicted RBP5.14□□□□□ -1.59
SF3B1-203ENST00000414174 UBAP2LQ14157 1087 aaKnown RBP5.14□□□□□ -1.59
SF3B1-203ENST00000414174 DZIP3Q86Y13 1208 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms