RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ADGRL3Q9HAR2 1447 aa11.79□□□□□ -0.52
SNHG3-201ENST00000413987 TOPAZ1Q8N9V7 1692 aa11.79□□□□□ -0.52
SNHG3-201ENST00000413987 CGNL1Q0VF96 1302 aa11.78□□□□□ -0.52
SNHG3-201ENST00000413987 PPP2R1AP30153 589 aa11.78□□□□□ -0.52
SNHG3-201ENST00000413987 NME9Q86XW9 330 aa11.78□□□□□ -0.52
SNHG3-201ENST00000413987 CCDC194A0A1B0GVG4 234 aa11.78□□□□□ -0.52
SNHG3-201ENST00000413987 FYB1O15117 783 aa11.78□□□□□ -0.52
SNHG3-201ENST00000413987 PNISRQ8TF01 805 aaKnown RBP11.78□□□□□ -0.52
SNHG3-201ENST00000413987 NINLQ9Y2I6 1382 aa11.77□□□□□ -0.52
SNHG3-201ENST00000413987 CDC42BPGQ6DT37 1551 aa11.77□□□□□ -0.52
SNHG3-201ENST00000413987 CPSF1Q10570 1443 aaKnown RBP11.77□□□□□ -0.52
SNHG3-201ENST00000413987 FMN2Q9NZ56 1722 aa11.77□□□□□ -0.53
SNHG3-201ENST00000413987 SH3BP5O60239 455 aa11.77□□□□□ -0.53
SNHG3-201ENST00000413987 XPCQ01831 940 aaPredicted RBP11.77□□□□□ -0.53
SNHG3-201ENST00000413987 PDE3BQ13370 1112 aa11.77□□□□□ -0.53
SNHG3-201ENST00000413987 MORC1Q86VD1 984 aa11.77□□□□□ -0.53
SNHG3-201ENST00000413987 FRAT1Q92837 279 aaPredicted RBP11.77□□□□□ -0.53
SNHG3-201ENST00000413987 ORAI2Q96SN7 254 aa11.77□□□□□ -0.53
SNHG3-201ENST00000413987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
SNHG3-201ENST00000413987 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
SNHG3-201ENST00000413987 PMM1Q92871 262 aa11.76□□□□□ -0.53
SNHG3-201ENST00000413987 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.76□□□□□ -0.53
SNHG3-201ENST00000413987 PHF14O94880 888 aa11.76□□□□□ -0.53
SNHG3-201ENST00000413987 MYBPC2Q14324 1141 aa11.76□□□□□ -0.53
SNHG3-201ENST00000413987 ESCO1Q5FWF5 840 aa11.76□□□□□ -0.53
SNHG3-201ENST00000413987 DNAJC14Q6Y2X3 702 aaPredicted RBP11.76□□□□□ -0.53
SNHG3-201ENST00000413987 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
SNHG3-201ENST00000413987 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
SNHG3-201ENST00000413987 ITSN1Q15811 1721 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 PAX3P23760 479 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 ARID4AP29374 1257 aaPredicted RBP11.75□□□□□ -0.53
SNHG3-201ENST00000413987 NLRP13Q86W25 1043 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 LARGE2Q8N3Y3 721 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 SOX12O15370 315 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 NUTM2GQ5VZR2 741 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 RINLQ6ZS11 566 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 DDX17Q92841 729 aaKnown RBP11.75□□□□□ -0.53
SNHG3-201ENST00000413987 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
SNHG3-201ENST00000413987 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
SNHG3-201ENST00000413987 TSHZ1Q6ZSZ6 1077 aa11.74□□□□□ -0.53
SNHG3-201ENST00000413987 SPOCK3Q9BQ16 436 aa11.74□□□□□ -0.53
SNHG3-201ENST00000413987 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
SNHG3-201ENST00000413987 XIRP1Q702N8 1843 aaKnown RBP11.74□□□□□ -0.53
SNHG3-201ENST00000413987 MON2Q7Z3U7 1717 aa11.74□□□□□ -0.53
SNHG3-201ENST00000413987 NOP9Q86U38 636 aaKnown RBP11.74□□□□□ -0.53
SNHG3-201ENST00000413987 TMA7Q9Y2S6 64 aaKnown RBP11.74□□□□□ -0.53
SNHG3-201ENST00000413987 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
SNHG3-201ENST00000413987 IGBP1P78318 339 aa11.73□□□□□ -0.53
SNHG3-201ENST00000413987 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
SNHG3-201ENST00000413987 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
SNHG3-201ENST00000413987 USP6P35125 1406 aa11.73□□□□□ -0.53
SNHG3-201ENST00000413987 EDC4Q6P2E9 1401 aaKnown RBP11.73□□□□□ -0.53
SNHG3-201ENST00000413987 FOXO3O43524 673 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 MAF1Q9H063 256 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 LRRC7Q96NW7 1537 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 BRD4O60885 1362 aaPredicted RBP11.72□□□□□ -0.53
SNHG3-201ENST00000413987 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 APLP1P51693 650 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 AMHR2Q16671 573 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 GNEQ9Y223 722 aaKnown RBP11.72□□□□□ -0.53
SNHG3-201ENST00000413987 FAN1Q9Y2M0 1017 aa11.72□□□□□ -0.53
SNHG3-201ENST00000413987 NRKQ7Z2Y5 1582 aa11.71□□□□□ -0.53
SNHG3-201ENST00000413987 CLEC4GQ6UXB4 293 aa11.71□□□□□ -0.53
SNHG3-201ENST00000413987 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.53
SNHG3-201ENST00000413987 TTC21BQ7Z4L5 1316 aa11.71□□□□□ -0.53
SNHG3-201ENST00000413987 ANKARQ7Z5J8 1434 aa11.71□□□□□ -0.53
SNHG3-201ENST00000413987 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.54
SNHG3-201ENST00000413987 ATF3P18847 181 aa11.71□□□□□ -0.54
SNHG3-201ENST00000413987 MTHFSP49914 203 aa11.71□□□□□ -0.54
SNHG3-201ENST00000413987 PSME1Q06323 249 aa11.71□□□□□ -0.54
SNHG3-201ENST00000413987 GIPC2Q8TF65 315 aa11.71□□□□□ -0.54
SNHG3-201ENST00000413987 GLMNQ92990 594 aa11.7□□□□□ -0.54
SNHG3-201ENST00000413987 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
SNHG3-201ENST00000413987 RFX1P22670 979 aa11.7□□□□□ -0.54
SNHG3-201ENST00000413987 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
SNHG3-201ENST00000413987 RRS1Q15050 365 aaKnown RBP11.7□□□□□ -0.54
SNHG3-201ENST00000413987 C1orf167Q5SNV9 1468 aa11.69□□□□□ -0.54
SNHG3-201ENST00000413987 MST1RQ04912 1400 aa11.69□□□□□ -0.54
SNHG3-201ENST00000413987 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
SNHG3-201ENST00000413987 MSH6P52701 1360 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 PTPROQ16827 1216 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 SSH2Q76I76 1423 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 NSD2O96028 1365 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 WDR78Q5VTH9 848 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 ANKRD26Q9UPS8 1709 aa11.68□□□□□ -0.54
SNHG3-201ENST00000413987 SPDYE2BA6NHP3 402 aa11.67□□□□□ -0.54
SNHG3-201ENST00000413987 SPDYE5A6NIY4 337 aa11.67□□□□□ -0.54
SNHG3-201ENST00000413987 SPDYE6P0CI01 402 aa11.67□□□□□ -0.54
SNHG3-201ENST00000413987 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
SNHG3-201ENST00000413987 COG3Q96JB2 828 aa11.67□□□□□ -0.54
SNHG3-201ENST00000413987 CHPF2Q9P2E5 772 aa11.67□□□□□ -0.54
SNHG3-201ENST00000413987 PIK3C2AO00443 1686 aa11.67□□□□□ -0.54
SNHG3-201ENST00000413987 NOM1Q5C9Z4 860 aaKnown RBP11.67□□□□□ -0.54
SNHG3-201ENST00000413987 L1TD1Q5T7N2 865 aaKnown RBP11.67□□□□□ -0.54
SNHG3-201ENST00000413987 EGFLAMQ63HQ2 1017 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms