RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 PHF14O94880 888 aa22.73■■□□□ 1.23
SF1-207ENST00000413951 ATG3Q9NT62 314 aa22.72■■□□□ 1.23
SF1-207ENST00000413951 GNPATO15228 680 aa22.71■■□□□ 1.23
SF1-207ENST00000413951 C1orf141Q5JVX7 400 aa22.71■■□□□ 1.23
SF1-207ENST00000413951 LINC00116Q8NCU8 138 aa22.71■■□□□ 1.23
SF1-207ENST00000413951 CABP4P57796 275 aa22.69■■□□□ 1.22
SF1-207ENST00000413951 ZNF530Q6P9A1 599 aaPredicted RBP22.69■■□□□ 1.22
SF1-207ENST00000413951 RTCBQ9Y3I0 505 aaKnown RBP22.68■■□□□ 1.22
SF1-207ENST00000413951 YBX3P16989 372 aaKnown RBP eCLIP22.67■■□□□ 1.223e-8■■□□□ 11.9
SF1-207ENST00000413951 ADRA2BP18089 450 aa22.67■■□□□ 1.22
SF1-207ENST00000413951 MTHFSP49914 203 aa22.67■■□□□ 1.22
SF1-207ENST00000413951 ITPK1Q13572 414 aa22.67■■□□□ 1.22
SF1-207ENST00000413951 TRAPPC3LQ5T215 181 aa22.67■■□□□ 1.22
SF1-207ENST00000413951 RC3H1Q5TC82 1133 aaKnown RBP22.66■■□□□ 1.22
SF1-207ENST00000413951 RBM42Q9BTD8 480 aaKnown RBP22.66■■□□□ 1.22
SF1-207ENST00000413951 UBR3Q6ZT12 1888 aa22.65■■□□□ 1.22
SF1-207ENST00000413951 GIGYF1O75420 1035 aaPredicted RBP22.65■■□□□ 1.22
SF1-207ENST00000413951 C1QTNF8P60827 252 aa22.65■■□□□ 1.22
SF1-207ENST00000413951 SULT6B1Q6IMI4 303 aa22.64■■□□□ 1.21
SF1-207ENST00000413951 AMIGO3Q86WK7 504 aa22.64■■□□□ 1.21
SF1-207ENST00000413951 NLGN1Q8N2Q7 840 aa22.64■■□□□ 1.21
SF1-207ENST00000413951 KDRP35968 1356 aa22.63■■□□□ 1.21
SF1-207ENST00000413951 CNTNAP4Q9C0A0 1308 aa22.62■■□□□ 1.21
SF1-207ENST00000413951 ZNF831Q5JPB2 1677 aa22.62■■□□□ 1.21
SF1-207ENST00000413951 IL13P35225 146 aa22.61■■□□□ 1.21
SF1-207ENST00000413951 RFC4P35249 363 aa22.6■■□□□ 1.21
SF1-207ENST00000413951 AMER1Q5JTC6 1135 aaPredicted RBP22.6■■□□□ 1.21
SF1-207ENST00000413951 KDM6AO15550 1401 aaPredicted RBP22.59■■□□□ 1.21
SF1-207ENST00000413951 RPS6KA4O75676 772 aa22.59■■□□□ 1.21
SF1-207ENST00000413951 MMP10P09238 476 aa22.59■■□□□ 1.21
SF1-207ENST00000413951 AKAP4Q5JQC9 854 aa22.59■■□□□ 1.21
SF1-207ENST00000413951 AEBP1Q8IUX7 1158 aa22.59■■□□□ 1.21
SF1-207ENST00000413951 SMIM5Q71RC9 77 aa22.58■■□□□ 1.21
SF1-207ENST00000413951 NFATC2IPQ8NCF5 419 aa22.58■■□□□ 1.21
SF1-207ENST00000413951 SENP3-EIF4A1A0A087X0R7 540 aa22.57■■□□□ 1.2
SF1-207ENST00000413951 TGFB2P61812 414 aa22.57■■□□□ 1.2
SF1-207ENST00000413951 GOLGB1Q14789 3259 aaKnown RBP22.57■■□□□ 1.2
SF1-207ENST00000413951 ARHGEF1Q92888 912 aaKnown RBP22.56■■□□□ 1.2
SF1-207ENST00000413951 SLC4A9Q96Q91 983 aa22.56■■□□□ 1.2
SF1-207ENST00000413951 PER1O15534 1290 aaPredicted RBP22.55■■□□□ 1.2
SF1-207ENST00000413951 PTCD1O75127 700 aaKnown RBP22.55■■□□□ 1.2
SF1-207ENST00000413951 CCDC87Q9NVE4 849 aa22.55■■□□□ 1.2
SF1-207ENST00000413951 PARP3Q9Y6F1 533 aa22.54■■□□□ 1.2
SF1-207ENST00000413951 GPBP1L1Q9HC44 474 aaPredicted RBP22.53■■□□□ 1.2
SF1-207ENST00000413951 ZNF316A6NFI3 1004 aaPredicted RBP22.52■■□□□ 1.2
SF1-207ENST00000413951 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
SF1-207ENST00000413951 GYS1P13807 737 aa22.52■■□□□ 1.2
SF1-207ENST00000413951 ATP10DQ9P241 1426 aa22.51■■□□□ 1.19
SF1-207ENST00000413951 SLC52A2Q9HAB3 445 aa22.51■■□□□ 1.19
SF1-207ENST00000413951 CRKLP46109 303 aaKnown RBP22.5■■□□□ 1.19
SF1-207ENST00000413951 NPC1L1Q9UHC9 1359 aa22.5■■□□□ 1.19
SF1-207ENST00000413951 COL5A3P25940 1745 aaPredicted RBP22.48■■□□□ 1.19
SF1-207ENST00000413951 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
SF1-207ENST00000413951 HMOX1P09601 288 aa22.47■■□□□ 1.19
SF1-207ENST00000413951 ADCY9O60503 1353 aa22.47■■□□□ 1.19
SF1-207ENST00000413951 C10orf71Q711Q0 1435 aa22.47■■□□□ 1.19
SF1-207ENST00000413951 CICQ96RK0 1608 aaPredicted RBP22.46■■□□□ 1.19
SF1-207ENST00000413951 RNMTO43148 476 aaKnown RBP22.46■■□□□ 1.19
SF1-207ENST00000413951 PXDNLA1KZ92 1463 aa22.46■■□□□ 1.19
SF1-207ENST00000413951 ZPR1O75312 459 aa22.45■■□□□ 1.18
SF1-207ENST00000413951 WWC3Q9ULE0 1092 aa22.45■■□□□ 1.18
SF1-207ENST00000413951 BCS1LQ9Y276 419 aa22.45■■□□□ 1.18
SF1-207ENST00000413951 USP42Q9H9J4 1324 aaKnown RBP22.45■■□□□ 1.18
SF1-207ENST00000413951 VSIG10Q8N0Z9 540 aa22.44■■□□□ 1.18
SF1-207ENST00000413951 SCN11AQ9UI33 1791 aa22.43■■□□□ 1.18
SF1-207ENST00000413951 A0A0G2JLW4 131 aa22.43■■□□□ 1.18
SF1-207ENST00000413951 MTHFSDQ2M296 383 aaKnown RBP22.43■■□□□ 1.18
SF1-207ENST00000413951 LGR6Q9HBX8 967 aa22.43■■□□□ 1.18
SF1-207ENST00000413951 C4AP0C0L4 1744 aa22.43■■□□□ 1.18
SF1-207ENST00000413951 INTS5Q6P9B9 1019 aaKnown RBP22.42■■□□□ 1.18
SF1-207ENST00000413951 KIF13BQ9NQT8 1826 aa22.42■■□□□ 1.18
SF1-207ENST00000413951 MRC1P22897 1456 aa22.41■■□□□ 1.18
SF1-207ENST00000413951 FCHSD2O94868 740 aa22.41■■□□□ 1.18
SF1-207ENST00000413951 DPEP1P16444 411 aa22.41■■□□□ 1.18
SF1-207ENST00000413951 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
SF1-207ENST00000413951 TTC5Q8N0Z6 440 aa22.41■■□□□ 1.18
SF1-207ENST00000413951 GAS2L2Q8NHY3 880 aa22.41■■□□□ 1.18
SF1-207ENST00000413951 PIM2Q9P1W9 311 aa22.41■■□□□ 1.18
SF1-207ENST00000413951 DDX10Q13206 875 aaKnown RBP22.4■■□□□ 1.18
SF1-207ENST00000413951 FKBP8Q14318 412 aa22.4■■□□□ 1.18
SF1-207ENST00000413951 ZNF526Q8TF50 670 aaPredicted RBP22.4■■□□□ 1.18
SF1-207ENST00000413951 CFAP53Q96M91 514 aa22.4■■□□□ 1.18
SF1-207ENST00000413951 U2SURPO15042 1029 aaKnown RBP22.39■■□□□ 1.17
SF1-207ENST00000413951 CYP19A1P11511 503 aaPredicted RBP22.39■■□□□ 1.17
SF1-207ENST00000413951 ARHGAP27Q6ZUM4 889 aa22.39■■□□□ 1.17
SF1-207ENST00000413951 SRP68Q9UHB9 627 aaKnown RBP22.39■■□□□ 1.17
SF1-207ENST00000413951 SOS1Q07889 1333 aaPredicted RBP22.38■■□□□ 1.17
SF1-207ENST00000413951 MYH14Q7Z406 1995 aaKnown RBP22.38■■□□□ 1.17
SF1-207ENST00000413951 STARD3NLO95772 234 aa22.38■■□□□ 1.17
SF1-207ENST00000413951 TEFQ10587 303 aa22.37■■□□□ 1.17
SF1-207ENST00000413951 SLC39A6Q13433 755 aa22.37■■□□□ 1.17
SF1-207ENST00000413951 TEX13AQ9BXU3 409 aaPredicted RBP22.37■■□□□ 1.17
SF1-207ENST00000413951 NARFQ9UHQ1 456 aa22.37■■□□□ 1.17
SF1-207ENST00000413951 TJP1Q07157 1748 aa22.37■■□□□ 1.17
SF1-207ENST00000413951 GNAT3A8MTJ3 354 aa22.36■■□□□ 1.17
SF1-207ENST00000413951 TM4SF1P30408 202 aa22.36■■□□□ 1.17
SF1-207ENST00000413951 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
SF1-207ENST00000413951 USPL1Q5W0Q7 1092 aa22.36■■□□□ 1.17
SF1-207ENST00000413951 A0A087WZG4 1122 aa22.35■■□□□ 1.17
SF1-207ENST00000413951 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms