RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CNKSR1Q969H4 720 aa7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 ZNF395Q9H8N7 513 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 ATP13A2Q9NQ11 1180 aa7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 USTQ9Y2C2 406 aa7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 RBM19Q9Y4C8 960 aaKnown RBP7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 SFI1A8K8P3 1242 aa7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 CSB-PGBD3P0DP91 1061 aa7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 BMP2P12643 396 aa7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 RNF144AP50876 292 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 FAM69CQ0P6D2 419 aa7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 MTFR1Q15390 333 aa7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 FHDC1Q9C0D6 1143 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 RAB6BQ9NRW1 208 aa7.32□□□□□ -1.24
HMGB1P11-201ENST00000413899 TMEM88BA6NKF7 163 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 LCE2BO14633 110 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 SMTNP53814 917 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 EPHA4P54764 986 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 CENPCQ03188 943 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 Q6ZNB5 142 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 NLRP3Q96P20 1036 aa7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 PURBQ96QR8 312 aaKnown RBP7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 INSM2Q96T92 566 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P11-201ENST00000413899 MEN1O00255 615 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 FOXK2Q01167 660 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 PDE4CQ08493 712 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 C6orf118Q5T5N4 469 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 RETREG2Q8NC44 543 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 ZFP42Q96MM3 310 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 GRIP2Q9C0E4 1043 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
HMGB1P11-201ENST00000413899 SOS2Q07890 1332 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 A6NJY4 79 aa7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 CDK2AP1O14519 115 aa7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 CTSOP43234 321 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 TLR1Q15399 786 aa7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 FOXD4L5Q5VV16 416 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 TSEN2Q8NCE0 465 aaKnown RBP7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 RNF217Q8TC41 542 aa7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 CLP1Q92989 425 aaKnown RBP7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 POLMQ9NP87 494 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 SCHIP1Q9P0W5 487 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 SERTAD1Q9UHV2 236 aa7.29□□□□□ -1.24
HMGB1P11-201ENST00000413899 TTLL8A6PVC2 850 aa7.28□□□□□ -1.24
HMGB1P11-201ENST00000413899 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
HMGB1P11-201ENST00000413899 SENP2Q9HC62 589 aa7.28□□□□□ -1.24
HMGB1P11-201ENST00000413899 IQSEC3Q9UPP2 1182 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P11-201ENST00000413899 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.25
HMGB1P11-201ENST00000413899 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
HMGB1P11-201ENST00000413899 NBPF15Q8N660 670 aa7.27□□□□□ -1.25
HMGB1P11-201ENST00000413899 KIFC2Q96AC6 838 aa7.27□□□□□ -1.25
HMGB1P11-201ENST00000413899 SPATA31C2B4DYI2 1134 aa7.26□□□□□ -1.25
HMGB1P11-201ENST00000413899 WEE1P30291 646 aa7.26□□□□□ -1.25
HMGB1P11-201ENST00000413899 POTEAQ6S8J7 498 aa7.26□□□□□ -1.25
HMGB1P11-201ENST00000413899 GAS2L2Q8NHY3 880 aa7.26□□□□□ -1.25
HMGB1P11-201ENST00000413899 TRIM47Q96LD4 638 aa7.26□□□□□ -1.25
HMGB1P11-201ENST00000413899 ZSCAN10Q96SZ4 725 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P11-201ENST00000413899 IGFBP4P22692 258 aa7.25□□□□□ -1.25
HMGB1P11-201ENST00000413899 OCLNQ16625 522 aa7.25□□□□□ -1.25
HMGB1P11-201ENST00000413899 WDR44Q5JSH3 913 aa7.25□□□□□ -1.25
HMGB1P11-201ENST00000413899 STAG2Q8N3U4 1231 aa7.25□□□□□ -1.25
HMGB1P11-201ENST00000413899 HINFPQ9BQA5 517 aa7.25□□□□□ -1.25
HMGB1P11-201ENST00000413899 TRAIPQ9BWF2 469 aa7.25□□□□□ -1.25
HMGB1P11-201ENST00000413899 SLAIN2Q9P270 581 aa7.25□□□□□ -1.25
HMGB1P11-201ENST00000413899 C21orf2O43822 256 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 SLC27A3Q5K4L6 730 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 LYSMD3Q7Z3D4 306 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 SLC9A9Q8IVB4 645 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 HOMEZQ8IX15 550 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 RHBDD1Q8TEB9 315 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 TSPAN10Q9H1Z9 355 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 GMPR2Q9P2T1 348 aaKnown RBP7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 DNMT3LQ9UJW3 386 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
HMGB1P11-201ENST00000413899 GTF2E1P29083 439 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P11-201ENST00000413899 PSMA6P60900 246 aaKnown RBP7.23□□□□□ -1.25
HMGB1P11-201ENST00000413899 TEAD4Q15561 434 aa7.23□□□□□ -1.25
HMGB1P11-201ENST00000413899 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.23□□□□□ -1.25
HMGB1P11-201ENST00000413899 GNASQ5JWF2 1037 aa7.23□□□□□ -1.25
HMGB1P11-201ENST00000413899 NIFKQ9BYG3 293 aaKnown RBP7.23□□□□□ -1.25
HMGB1P11-201ENST00000413899 SSFA2P28290 1259 aa7.22□□□□□ -1.25
HMGB1P11-201ENST00000413899 HIRAP54198 1017 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P11-201ENST00000413899 TMEM214Q6NUQ4 689 aaKnown RBP7.22□□□□□ -1.25
HMGB1P11-201ENST00000413899 NBPF10Q6P3W6 841 aaKnown RBP7.22□□□□□ -1.25
HMGB1P11-201ENST00000413899 C1orf216Q8TAB5 229 aa7.22□□□□□ -1.25
HMGB1P11-201ENST00000413899 CXXC1Q9P0U4 656 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P11-201ENST00000413899 ATAD2Q6PL18 1390 aa7.21□□□□□ -1.25
HMGB1P11-201ENST00000413899 CARNS1A5YM72 827 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 FOXO3O43524 673 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 MAN1A2O60476 641 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 ATP2B4P23634 1241 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 C4orf17Q53FE4 359 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 B4GALNT3Q6L9W6 998 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 TAS1R3Q7RTX0 852 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 ZDHHC1Q8WTX9 485 aa7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 SCG3Q8WXD2 468 aaKnown RBP7.21□□□□□ -1.26
HMGB1P11-201ENST00000413899 FIGNL2A6NMB9 653 aa7.2□□□□□ -1.26
HMGB1P11-201ENST00000413899 PRMT3O60678 531 aa7.2□□□□□ -1.26
HMGB1P11-201ENST00000413899 POU4F2Q12837 409 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms