RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CDC42BPGQ6DT37 1551 aa17.74■□□□□ 0.43
SEMA3F-202ENST00000413852 PRR36Q9H6K5 1346 aa17.74■□□□□ 0.43
SEMA3F-202ENST00000413852 DNTTIP2Q5QJE6 756 aaKnown RBP17.74■□□□□ 0.43
SEMA3F-202ENST00000413852 TSPY26PQ9H489 355 aa17.74■□□□□ 0.43
SEMA3F-202ENST00000413852 CNPY2Q9Y2B0 182 aa17.74■□□□□ 0.43
SEMA3F-202ENST00000413852 TMEM131LA2VDJ0 1609 aa17.73■□□□□ 0.43
SEMA3F-202ENST00000413852 CHMLP26374 656 aa17.73■□□□□ 0.43
SEMA3F-202ENST00000413852 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
SEMA3F-202ENST00000413852 MX1P20591 662 aa17.72■□□□□ 0.43
SEMA3F-202ENST00000413852 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
SEMA3F-202ENST00000413852 LRRFIP2Q9Y608 721 aaKnown RBP17.72■□□□□ 0.43
SEMA3F-202ENST00000413852 HCLS1P14317 486 aaPredicted RBP17.71■□□□□ 0.43
SEMA3F-202ENST00000413852 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 LRRCC1Q9C099 1032 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 CCDC61Q9Y6R9 512 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 EDC4Q6P2E9 1401 aaKnown RBP17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 HMMRO75330 724 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 GNAI2P04899 355 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 NUTM2GQ5VZR2 741 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 CCDC39Q9UFE4 941 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 CHMP3Q9Y3E7 222 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 BCL11BQ9C0K0 894 aaPredicted RBP17.7■□□□□ 0.42
SEMA3F-202ENST00000413852 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
SEMA3F-202ENST00000413852 ARHGAP31Q2M1Z3 1444 aa17.69■□□□□ 0.42
SEMA3F-202ENST00000413852 CDK12Q9NYV4 1490 aaPredicted RBP17.69■□□□□ 0.42
SEMA3F-202ENST00000413852 FIBPO43427 364 aa17.68■□□□□ 0.42
SEMA3F-202ENST00000413852 CLTCQ00610 1675 aaKnown RBP17.68■□□□□ 0.42
SEMA3F-202ENST00000413852 HS1BP3Q53T59 392 aa17.68■□□□□ 0.42
SEMA3F-202ENST00000413852 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
SEMA3F-202ENST00000413852 PTPRCP08575 1304 aa17.67■□□□□ 0.42
SEMA3F-202ENST00000413852 CUL4AQ13619 759 aa17.67■□□□□ 0.42
SEMA3F-202ENST00000413852 RASEFQ8IZ41 740 aa17.67■□□□□ 0.42
SEMA3F-202ENST00000413852 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
SEMA3F-202ENST00000413852 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
SEMA3F-202ENST00000413852 LARGE1O95461 756 aa17.67■□□□□ 0.42
SEMA3F-202ENST00000413852 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
SEMA3F-202ENST00000413852 ATP7BP35670 1465 aa17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 COL9A3Q14050 684 aaPredicted RBP17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 GIMAP6Q6P9H5 292 aa17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 SALL3Q9BXA9 1300 aa17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 MBD3O95983 291 aa17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 FLIIQ13045 1269 aa17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 OSBPL3Q9H4L5 887 aa17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 PHAXQ9H814 394 aaKnown RBP17.66■□□□□ 0.42
SEMA3F-202ENST00000413852 ADCY5O95622 1261 aa17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 ACEP12821 1306 aa17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 RIMS1Q86UR5 1692 aaKnown RBP17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 PREX1Q8TCU6 1659 aa17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 TCHHQ07283 1943 aa17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 AP5Z1O43299 807 aa17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 ANXA1P04083 346 aa17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 CRB1P82279 1406 aa17.65■□□□□ 0.42
SEMA3F-202ENST00000413852 SPC24Q8NBT2 197 aa17.64■□□□□ 0.42
SEMA3F-202ENST00000413852 TTC21BQ7Z4L5 1316 aa17.64■□□□□ 0.41
SEMA3F-202ENST00000413852 MCCP23508 829 aa17.64■□□□□ 0.41
SEMA3F-202ENST00000413852 SASS6Q6UVJ0 657 aa17.64■□□□□ 0.41
SEMA3F-202ENST00000413852 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
SEMA3F-202ENST00000413852 CWC27Q6UX04 472 aaKnown RBP17.64■□□□□ 0.41
SEMA3F-202ENST00000413852 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
SEMA3F-202ENST00000413852 RPAP1Q9BWH6 1393 aaPredicted RBP17.63■□□□□ 0.41
SEMA3F-202ENST00000413852 SURF6O75683 361 aaKnown RBP17.63■□□□□ 0.41
SEMA3F-202ENST00000413852 CCT4P50991 539 aaKnown RBP17.63■□□□□ 0.41
SEMA3F-202ENST00000413852 FAM173BQ6P4H8 233 aa17.63■□□□□ 0.41
SEMA3F-202ENST00000413852 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
SEMA3F-202ENST00000413852 ZHX1Q9UKY1 873 aaPredicted RBP17.63■□□□□ 0.41
SEMA3F-202ENST00000413852 AK2P54819 239 aa17.62■□□□□ 0.41
SEMA3F-202ENST00000413852 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
SEMA3F-202ENST00000413852 EIF2S2P20042 333 aaKnown RBP17.62■□□□□ 0.41
SEMA3F-202ENST00000413852 ATP8B2P98198 1209 aa17.62■□□□□ 0.41
SEMA3F-202ENST00000413852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
SEMA3F-202ENST00000413852 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
SEMA3F-202ENST00000413852 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
SEMA3F-202ENST00000413852 ZNF710Q8N1W2 664 aa17.61■□□□□ 0.41
SEMA3F-202ENST00000413852 PRDM4Q9UKN5 801 aa17.61■□□□□ 0.41
SEMA3F-202ENST00000413852 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
SEMA3F-202ENST00000413852 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
SEMA3F-202ENST00000413852 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 EYA1Q99502 592 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 REREQ9P2R6 1566 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 SYT1P21579 422 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 DNM1Q05193 864 aaKnown RBP17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 CSPP1Q1MSJ5 1256 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 NECAB1Q8N987 351 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 NOLC1Q14978 699 aaKnown RBP eCLIP17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 PPP1R42Q7Z4L9 355 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 TCEANC2Q96MN5 208 aa17.6■□□□□ 0.41
SEMA3F-202ENST00000413852 CBX1P83916 185 aa17.59■□□□□ 0.41
SEMA3F-202ENST00000413852 ADCK5Q3MIX3 580 aa17.59■□□□□ 0.41
SEMA3F-202ENST00000413852 FERMT3Q86UX7 667 aa17.59■□□□□ 0.41
SEMA3F-202ENST00000413852 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
SEMA3F-202ENST00000413852 DYNC1I1O14576 645 aa17.59■□□□□ 0.41
SEMA3F-202ENST00000413852 PYCARDQ9ULZ3 195 aa17.59■□□□□ 0.41
SEMA3F-202ENST00000413852 SOS1Q07889 1333 aaPredicted RBP17.58■□□□□ 0.41
SEMA3F-202ENST00000413852 NBPF7P0C2Y1 421 aaPredicted RBP17.58■□□□□ 0.41
SEMA3F-202ENST00000413852 CAMK4Q16566 473 aa17.58■□□□□ 0.41
SEMA3F-202ENST00000413852 WDR33Q9C0J8 1336 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms