RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 MS4A1P11836 297 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 RLBP1P12271 317 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 AAMPQ13685 434 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 KRT24Q2M2I5 525 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 ATF7IPQ6VMQ6 1270 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 ZCRB1Q8TBF4 217 aaKnown RBP10.59□□□□□ -0.71
HDAC9-207ENST00000413509 DCAF5Q96JK2 942 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 MIS18AQ9NYP9 233 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 SPATA31A6Q5VVP1 1343 aa10.58□□□□□ -0.71
HDAC9-207ENST00000413509 RGS12O14924 1447 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
HDAC9-207ENST00000413509 UBR2Q8IWV8 1755 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 TRIM27P14373 513 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 EVA1CP58658 441 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 EIF4A1P60842 406 aaKnown RBP10.58□□□□□ -0.72
HDAC9-207ENST00000413509 SLC52A2Q9HAB3 445 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 STRN4Q9NRL3 753 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 NOB1Q9ULX3 412 aaKnown RBP10.58□□□□□ -0.72
HDAC9-207ENST00000413509 TNNQ9UQP3 1299 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 ABCC4O15439 1325 aa10.58□□□□□ -0.72
HDAC9-207ENST00000413509 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
HDAC9-207ENST00000413509 TEFQ10587 303 aa10.57□□□□□ -0.72
HDAC9-207ENST00000413509 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
HDAC9-207ENST00000413509 TNS2Q63HR2 1409 aa10.57□□□□□ -0.72
HDAC9-207ENST00000413509 SPATA31A1Q5TZJ5 1347 aa10.57□□□□□ -0.72
HDAC9-207ENST00000413509 BCL9LQ86UU0 1499 aa10.56□□□□□ -0.72
HDAC9-207ENST00000413509 ELL2O00472 640 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-207ENST00000413509 MVPQ14764 893 aaKnown RBP10.56□□□□□ -0.72
HDAC9-207ENST00000413509 B4GALNT3Q6L9W6 998 aa10.56□□□□□ -0.72
HDAC9-207ENST00000413509 DZIP1LQ8IYY4 767 aaKnown RBP10.56□□□□□ -0.72
HDAC9-207ENST00000413509 FRAT1Q92837 279 aaPredicted RBP10.56□□□□□ -0.72
HDAC9-207ENST00000413509 THRAP3Q9Y2W1 955 aaKnown RBP10.56□□□□□ -0.72
HDAC9-207ENST00000413509 SPATA31A5Q5VU36 1347 aa10.56□□□□□ -0.72
HDAC9-207ENST00000413509 SPATA31A7Q8IWB4 1347 aa10.56□□□□□ -0.72
HDAC9-207ENST00000413509 C5P01031 1676 aa10.55□□□□□ -0.72
HDAC9-207ENST00000413509 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
HDAC9-207ENST00000413509 ERVV-2B6SEH9 535 aa10.55□□□□□ -0.72
HDAC9-207ENST00000413509 ADAMTS2O95450 1211 aa10.55□□□□□ -0.72
HDAC9-207ENST00000413509 CANXP27824 592 aaKnown RBP10.55□□□□□ -0.72
HDAC9-207ENST00000413509 FNBP4Q8N3X1 1017 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-207ENST00000413509 CDCA7Q9BWT1 371 aaPredicted RBP10.55□□□□□ -0.72
HDAC9-207ENST00000413509 PTPRCP08575 1304 aa10.55□□□□□ -0.72
HDAC9-207ENST00000413509 KDM2BQ8NHM5 1336 aa10.55□□□□□ -0.72
HDAC9-207ENST00000413509 LAMB4A4D0S4 1761 aa10.54□□□□□ -0.72
HDAC9-207ENST00000413509 KCNQ3O43525 872 aa10.54□□□□□ -0.72
HDAC9-207ENST00000413509 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
HDAC9-207ENST00000413509 CCDC136Q96JN2 1154 aa10.54□□□□□ -0.72
HDAC9-207ENST00000413509 API5Q9BZZ5 524 aaKnown RBP10.54□□□□□ -0.72
HDAC9-207ENST00000413509 COG6Q9Y2V7 657 aa10.54□□□□□ -0.72
HDAC9-207ENST00000413509 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 HSPA1LP34931 641 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 CCDC30Q5VVM6 783 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 ZNF790Q6PG37 636 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 FTSJ3Q8IY81 847 aaKnown RBP10.53□□□□□ -0.72
HDAC9-207ENST00000413509 CLUAP1Q96AJ1 413 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 CHMP4AQ9BY43 222 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 PXDNLA1KZ92 1463 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 ITGB4P16144 1822 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
HDAC9-207ENST00000413509 NUTM2BA6NNL0 878 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-207ENST00000413509 NUTM2EB1AL46 878 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-207ENST00000413509 GIGYF1O75420 1035 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-207ENST00000413509 VPS72Q15906 364 aa10.52□□□□□ -0.73
HDAC9-207ENST00000413509 UNC5CLQ8IV45 518 aa10.52□□□□□ -0.73
HDAC9-207ENST00000413509 NUTM2AQ8IVF1 878 aaPredicted RBP10.52□□□□□ -0.73
HDAC9-207ENST00000413509 TMEM57Q8N5G2 664 aa10.52□□□□□ -0.73
HDAC9-207ENST00000413509 NFATC2IPQ8NCF5 419 aa10.52□□□□□ -0.73
HDAC9-207ENST00000413509 INTS3Q68E01 1043 aaKnown RBP10.51□□□□□ -0.73
HDAC9-207ENST00000413509 DDX19BQ9UMR2 479 aa10.51□□□□□ -0.73
HDAC9-207ENST00000413509 TCERG1O14776 1098 aaKnown RBP10.5□□□□□ -0.73
HDAC9-207ENST00000413509 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
HDAC9-207ENST00000413509 CABP4P57796 275 aa10.5□□□□□ -0.73
HDAC9-207ENST00000413509 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
HDAC9-207ENST00000413509 G2E3Q7L622 706 aa10.5□□□□□ -0.73
HDAC9-207ENST00000413509 STK31Q9BXU1 1019 aa10.5□□□□□ -0.73
HDAC9-207ENST00000413509 ZBTB40Q9NUA8 1239 aa10.5□□□□□ -0.73
HDAC9-207ENST00000413509 DOT1LQ8TEK3 1739 aa10.5□□□□□ -0.73
HDAC9-207ENST00000413509 CICQ96RK0 1608 aaPredicted RBP10.49□□□□□ -0.73
HDAC9-207ENST00000413509 FLIIQ13045 1269 aa10.49□□□□□ -0.73
HDAC9-207ENST00000413509 USP35Q9P2H5 1018 aa10.49□□□□□ -0.73
HDAC9-207ENST00000413509 IBTKQ9P2D0 1353 aaPredicted RBP10.49□□□□□ -0.73
HDAC9-207ENST00000413509 BCL9O00512 1426 aa10.49□□□□□ -0.73
HDAC9-207ENST00000413509 ATRNO75882 1429 aa10.49□□□□□ -0.73
HDAC9-207ENST00000413509 EXOC5O00471 708 aa10.48□□□□□ -0.73
HDAC9-207ENST00000413509 ZBTB7BO15156 539 aaPredicted RBP10.48□□□□□ -0.73
HDAC9-207ENST00000413509 SLC39A6Q13433 755 aa10.48□□□□□ -0.73
HDAC9-207ENST00000413509 CENPQQ7L2Z9 268 aaPredicted RBP10.48□□□□□ -0.73
HDAC9-207ENST00000413509 ITPRIPQ8IWB1 547 aa10.48□□□□□ -0.73
HDAC9-207ENST00000413509 DDX54Q8TDD1 881 aaKnown RBP10.48□□□□□ -0.73
HDAC9-207ENST00000413509 ZNF496Q96IT1 587 aaPredicted RBP10.48□□□□□ -0.73
HDAC9-207ENST00000413509 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
HDAC9-207ENST00000413509 SNRPA1P09661 255 aaKnown RBP10.47□□□□□ -0.73
HDAC9-207ENST00000413509 PDIA6Q15084 440 aa10.47□□□□□ -0.73
HDAC9-207ENST00000413509 LRP10Q7Z4F1 713 aa10.47□□□□□ -0.73
HDAC9-207ENST00000413509 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
HDAC9-207ENST00000413509 C8orf37Q96NL8 207 aa10.47□□□□□ -0.73
HDAC9-207ENST00000413509 FMNL2Q96PY5 1086 aa10.47□□□□□ -0.73
HDAC9-207ENST00000413509 CHMP4BQ9H444 224 aaKnown RBP10.47□□□□□ -0.73
HDAC9-207ENST00000413509 CHPF2Q9P2E5 772 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms