RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 MBIPQ9NS73 344 aa33.81■■■■□ 3
RHBDD3-203ENST00000413137 ERVV-2B6SEH9 535 aa33.81■■■■□ 3
RHBDD3-203ENST00000413137 CABP4P57796 275 aa33.8■■■■□ 3
RHBDD3-203ENST00000413137 GNAI1P63096 354 aa33.8■■■■□ 3
RHBDD3-203ENST00000413137 FANCIQ9NVI1 1328 aa33.79■■■■□ 3
RHBDD3-203ENST00000413137 MRC1P22897 1456 aa33.79■■■■□ 3
RHBDD3-203ENST00000413137 ACSBG1Q96GR2 724 aa33.79■■■■□ 3
RHBDD3-203ENST00000413137 KRT27Q7Z3Y8 459 aa33.78■■■■□ 3
RHBDD3-203ENST00000413137 BRWD3Q6RI45 1802 aa33.78■■■■□ 3
RHBDD3-203ENST00000413137 PRIM1P49642 420 aaKnown RBP33.77■■■■□ 3
RHBDD3-203ENST00000413137 MYH16Q9H6N6 1097 aa33.77■■■■□ 3
RHBDD3-203ENST00000413137 KAT6BQ8WYB5 2073 aa33.76■■■□□ 2.99
RHBDD3-203ENST00000413137 BTBD11A6QL63 1104 aa33.76■■■□□ 2.99
RHBDD3-203ENST00000413137 KCNQ3O43525 872 aa33.76■■■□□ 2.99
RHBDD3-203ENST00000413137 TSPYL4Q9UJ04 414 aa33.76■■■□□ 2.99
RHBDD3-203ENST00000413137 SIPA1L3O60292 1781 aaPredicted RBP33.74■■■□□ 2.99
RHBDD3-203ENST00000413137 PIGBQ92521 554 aa33.74■■■□□ 2.99
RHBDD3-203ENST00000413137 KCNQ2O43526 872 aa33.73■■■□□ 2.99
RHBDD3-203ENST00000413137 SYTL4Q96C24 671 aaPredicted RBP33.73■■■□□ 2.99
RHBDD3-203ENST00000413137 SLC39A6Q13433 755 aa33.72■■■□□ 2.99
RHBDD3-203ENST00000413137 TMOD3Q9NYL9 352 aa33.72■■■□□ 2.99
RHBDD3-203ENST00000413137 DOT1LQ8TEK3 1739 aa33.72■■■□□ 2.99
RHBDD3-203ENST00000413137 PTF1AQ7RTS3 328 aa33.71■■■□□ 2.99
RHBDD3-203ENST00000413137 KRT24Q2M2I5 525 aa33.7■■■□□ 2.99
RHBDD3-203ENST00000413137 BABAM1Q9NWV8 329 aa33.69■■■□□ 2.98
RHBDD3-203ENST00000413137 BCL9O00512 1426 aa33.68■■■□□ 2.98
RHBDD3-203ENST00000413137 EXOSC9Q06265 439 aaKnown RBP33.68■■■□□ 2.98
RHBDD3-203ENST00000413137 ITGB4P16144 1822 aa33.67■■■□□ 2.98
RHBDD3-203ENST00000413137 EP400Q96L91 3159 aa33.66■■■□□ 2.98
RHBDD3-203ENST00000413137 ZNF790Q6PG37 636 aa33.65■■■□□ 2.98
RHBDD3-203ENST00000413137 C8orf58Q8NAV2 365 aa33.65■■■□□ 2.98
RHBDD3-203ENST00000413137 ASAP1Q9ULH1 1129 aa33.65■■■□□ 2.98
RHBDD3-203ENST00000413137 TSPYL6Q8N831 410 aa33.64■■■□□ 2.98
RHBDD3-203ENST00000413137 EIF4A1P60842 406 aaKnown RBP33.64■■■□□ 2.98
RHBDD3-203ENST00000413137 KDM3BQ7LBC6 1761 aa33.63■■■□□ 2.97
RHBDD3-203ENST00000413137 FAM196AQ6ZSG2 479 aa33.63■■■□□ 2.97
RHBDD3-203ENST00000413137 ATG3Q9NT62 314 aa33.63■■■□□ 2.97
RHBDD3-203ENST00000413137 ELL2O00472 640 aaPredicted RBP33.62■■■□□ 2.97
RHBDD3-203ENST00000413137 ZNF496Q96IT1 587 aaPredicted RBP33.59■■■□□ 2.97
RHBDD3-203ENST00000413137 CENPBP07199 599 aaPredicted RBP33.58■■■□□ 2.97
RHBDD3-203ENST00000413137 TTC5Q8N0Z6 440 aa33.57■■■□□ 2.96
RHBDD3-203ENST00000413137 PAPPAQ13219 1627 aa33.57■■■□□ 2.96
RHBDD3-203ENST00000413137 SBF2Q86WG5 1849 aa33.55■■■□□ 2.96
RHBDD3-203ENST00000413137 PRAMEF22A3QJZ6 481 aa33.55■■■□□ 2.96
RHBDD3-203ENST00000413137 PTCD1O75127 700 aaKnown RBP33.55■■■□□ 2.96
RHBDD3-203ENST00000413137 VAMP4O75379 141 aa33.55■■■□□ 2.96
RHBDD3-203ENST00000413137 TRIM37O94972 964 aa33.55■■■□□ 2.96
RHBDD3-203ENST00000413137 HEG1Q9ULI3 1381 aa33.55■■■□□ 2.96
RHBDD3-203ENST00000413137 NHSQ6T4R5 1651 aa33.55■■■□□ 2.96
RHBDD3-203ENST00000413137 TWISTNBQ3B726 338 aaPredicted RBP33.54■■■□□ 2.96
RHBDD3-203ENST00000413137 KCPQ6ZWJ8 1503 aa33.54■■■□□ 2.96
RHBDD3-203ENST00000413137 BCL11BQ9C0K0 894 aaPredicted RBP33.53■■■□□ 2.96
RHBDD3-203ENST00000413137 GIGYF1O75420 1035 aaPredicted RBP33.51■■■□□ 2.95
RHBDD3-203ENST00000413137 FMNL2Q96PY5 1086 aa33.51■■■□□ 2.95
RHBDD3-203ENST00000413137 SLC4A9Q96Q91 983 aa33.49■■■□□ 2.95
RHBDD3-203ENST00000413137 UBR2Q8IWV8 1755 aa33.49■■■□□ 2.95
RHBDD3-203ENST00000413137 RBM42Q9BTD8 480 aaKnown RBP33.48■■■□□ 2.95
RHBDD3-203ENST00000413137 BTAF1O14981 1849 aa33.48■■■□□ 2.95
RHBDD3-203ENST00000413137 PALLDQ8WX93 1383 aa33.47■■■□□ 2.95
RHBDD3-203ENST00000413137 RCAN3Q9UKA8 241 aa33.47■■■□□ 2.95
RHBDD3-203ENST00000413137 TCERG1O14776 1098 aaKnown RBP33.46■■■□□ 2.95
RHBDD3-203ENST00000413137 CT47B1P0C2W7 299 aaPredicted RBP33.45■■■□□ 2.95
RHBDD3-203ENST00000413137 NECTIN2Q92692 538 aa33.45■■■□□ 2.95
RHBDD3-203ENST00000413137 SNRPA1P09661 255 aaKnown RBP33.44■■■□□ 2.94
RHBDD3-203ENST00000413137 USP16Q9Y5T5 823 aa33.44■■■□□ 2.94
RHBDD3-203ENST00000413137 RARSP54136 660 aaKnown RBP33.43■■■□□ 2.94
RHBDD3-203ENST00000413137 SMARCC1Q92922 1105 aaPredicted RBP33.43■■■□□ 2.94
RHBDD3-203ENST00000413137 BCL2L13Q9BXK5 485 aa33.43■■■□□ 2.94
RHBDD3-203ENST00000413137 EIF2S2P20042 333 aaKnown RBP33.42■■■□□ 2.94
RHBDD3-203ENST00000413137 BCAR3O75815 825 aa33.41■■■□□ 2.94
RHBDD3-203ENST00000413137 HOXB7P09629 217 aa33.41■■■□□ 2.94
RHBDD3-203ENST00000413137 SSH1Q8WYL5 1049 aa33.41■■■□□ 2.94
RHBDD3-203ENST00000413137 C5P01031 1676 aa33.4■■■□□ 2.94
RHBDD3-203ENST00000413137 LOC102724428A0A0B4J2F2 783 aa33.4■■■□□ 2.94
RHBDD3-203ENST00000413137 SIK1P57059 783 aa33.4■■■□□ 2.94
RHBDD3-203ENST00000413137 KCNQ4P56696 695 aa33.39■■■□□ 2.94
RHBDD3-203ENST00000413137 DNAJC10Q8IXB1 793 aa33.39■■■□□ 2.94
RHBDD3-203ENST00000413137 HDGFL1Q5TGJ6 251 aa33.38■■■□□ 2.93
RHBDD3-203ENST00000413137 VSIG10Q8N0Z9 540 aa33.38■■■□□ 2.93
RHBDD3-203ENST00000413137 SOS1Q07889 1333 aaPredicted RBP33.38■■■□□ 2.93
RHBDD3-203ENST00000413137 ITPK1Q13572 414 aa33.36■■■□□ 2.93
RHBDD3-203ENST00000413137 ATP6V1AP38606 617 aa33.35■■■□□ 2.93
RHBDD3-203ENST00000413137 ZNF428Q96B54 188 aa33.34■■■□□ 2.93
RHBDD3-203ENST00000413137 APBA3O96018 575 aa33.34■■■□□ 2.93
RHBDD3-203ENST00000413137 SMC4Q9NTJ3 1288 aa33.34■■■□□ 2.93
RHBDD3-203ENST00000413137 ALDH1L2Q3SY69 923 aa33.33■■■□□ 2.93
RHBDD3-203ENST00000413137 CCDC30Q5VVM6 783 aa33.33■■■□□ 2.93
RHBDD3-203ENST00000413137 MRPL50Q8N5N7 158 aaKnown RBP33.33■■■□□ 2.93
RHBDD3-203ENST00000413137 SUPT16HQ9Y5B9 1047 aaKnown RBP33.33■■■□□ 2.93
RHBDD3-203ENST00000413137 PIP4K2AP48426 406 aaPredicted RBP33.32■■■□□ 2.92
RHBDD3-203ENST00000413137 CHPF2Q9P2E5 772 aa33.32■■■□□ 2.92
RHBDD3-203ENST00000413137 ANXA1P04083 346 aa33.31■■■□□ 2.92
RHBDD3-203ENST00000413137 PROSER3Q2NL68 480 aa33.31■■■□□ 2.92
RHBDD3-203ENST00000413137 TJP1Q07157 1748 aa33.3■■■□□ 2.92
RHBDD3-203ENST00000413137 PDIA6Q15084 440 aa33.3■■■□□ 2.92
RHBDD3-203ENST00000413137 A1BGP04217 495 aa33.3■■■□□ 2.92
RHBDD3-203ENST00000413137 SLC4A2P04920 1241 aa33.3■■■□□ 2.92
RHBDD3-203ENST00000413137 CYP19A1P11511 503 aaPredicted RBP33.3■■■□□ 2.92
RHBDD3-203ENST00000413137 CCNL1Q9UK58 526 aaPredicted RBP33.3■■■□□ 2.92
RHBDD3-203ENST00000413137 TNS1Q9HBL0 1735 aaKnown RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms