RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-204ENST00000412913 DDX54Q8TDD1 881 aaKnown RBP13.8□□□□□ -0.2
SMARCAL1-204ENST00000412913 CALD1Q05682 793 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-204ENST00000412913 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
SMARCAL1-204ENST00000412913 TSR2Q969E8 191 aaKnown RBP13.79□□□□□ -0.2
SMARCAL1-204ENST00000412913 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
SMARCAL1-204ENST00000412913 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
SMARCAL1-204ENST00000412913 TJP1Q07157 1748 aa13.78□□□□□ -0.2
SMARCAL1-204ENST00000412913 CHL1O00533 1208 aa13.78□□□□□ -0.2
SMARCAL1-204ENST00000412913 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-204ENST00000412913 SEPT12Q8IYM1 358 aa13.78□□□□□ -0.2
SMARCAL1-204ENST00000412913 SLC52A2Q9HAB3 445 aa13.78□□□□□ -0.2
SMARCAL1-204ENST00000412913 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
SMARCAL1-204ENST00000412913 LY75O60449 1722 aa13.77□□□□□ -0.21
SMARCAL1-204ENST00000412913 GNAI1P63096 354 aa13.77□□□□□ -0.21
SMARCAL1-204ENST00000412913 ZNF831Q5JPB2 1677 aa13.77□□□□□ -0.21
SMARCAL1-204ENST00000412913 MYH16Q9H6N6 1097 aa13.76□□□□□ -0.21
SMARCAL1-204ENST00000412913 ERVV-2B6SEH9 535 aa13.75□□□□□ -0.21
SMARCAL1-204ENST00000412913 TEFQ10587 303 aa13.75□□□□□ -0.21
SMARCAL1-204ENST00000412913 BABAM1Q9NWV8 329 aa13.75□□□□□ -0.21
SMARCAL1-204ENST00000412913 COL5A3P25940 1745 aaPredicted RBP13.75□□□□□ -0.21
SMARCAL1-204ENST00000412913 HEG1Q9ULI3 1381 aa13.74□□□□□ -0.21
SMARCAL1-204ENST00000412913 A0A0G2JS52 829 aa13.74□□□□□ -0.21
SMARCAL1-204ENST00000412913 MYT1Q01538 1121 aa13.74□□□□□ -0.21
SMARCAL1-204ENST00000412913 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
SMARCAL1-204ENST00000412913 MIS18AQ9NYP9 233 aa13.74□□□□□ -0.21
SMARCAL1-204ENST00000412913 TSPYL4Q9UJ04 414 aa13.74□□□□□ -0.21
SMARCAL1-204ENST00000412913 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
SMARCAL1-204ENST00000412913 RREB1Q92766 1687 aa13.73□□□□□ -0.21
SMARCAL1-204ENST00000412913 KCNQ3O43525 872 aa13.73□□□□□ -0.21
SMARCAL1-204ENST00000412913 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
SMARCAL1-204ENST00000412913 KRT24Q2M2I5 525 aa13.73□□□□□ -0.21
SMARCAL1-204ENST00000412913 BTBD11A6QL63 1104 aa13.72□□□□□ -0.21
SMARCAL1-204ENST00000412913 RXRBP28702 533 aa13.72□□□□□ -0.21
SMARCAL1-204ENST00000412913 CABP4P57796 275 aa13.72□□□□□ -0.21
SMARCAL1-204ENST00000412913 EXOSC9Q06265 439 aaKnown RBP13.72□□□□□ -0.21
SMARCAL1-204ENST00000412913 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
SMARCAL1-204ENST00000412913 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
SMARCAL1-204ENST00000412913 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
SMARCAL1-204ENST00000412913 TAF1LQ8IZX4 1826 aa13.71□□□□□ -0.21
SMARCAL1-204ENST00000412913 MSH5O43196 834 aa13.71□□□□□ -0.21
SMARCAL1-204ENST00000412913 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
SMARCAL1-204ENST00000412913 TSPYL6Q8N831 410 aa13.71□□□□□ -0.21
SMARCAL1-204ENST00000412913 CACNA1FO60840 1977 aa13.71□□□□□ -0.22
SMARCAL1-204ENST00000412913 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 SLC39A6Q13433 755 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 ZNF790Q6PG37 636 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 KRT27Q7Z3Y8 459 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 C8orf58Q8NAV2 365 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 PIGBQ92521 554 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 N4BP2Q86UW6 1770 aaPredicted RBP13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 KAT6BQ8WYB5 2073 aa13.7□□□□□ -0.22
SMARCAL1-204ENST00000412913 PRIM1P49642 420 aaKnown RBP13.69□□□□□ -0.22
SMARCAL1-204ENST00000412913 KCNQ2O43526 872 aa13.68□□□□□ -0.22
SMARCAL1-204ENST00000412913 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
SMARCAL1-204ENST00000412913 PTF1AQ7RTS3 328 aa13.68□□□□□ -0.22
SMARCAL1-204ENST00000412913 EP400Q96L91 3159 aa13.67□□□□□ -0.22
SMARCAL1-204ENST00000412913 VAMP4O75379 141 aa13.67□□□□□ -0.22
SMARCAL1-204ENST00000412913 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
SMARCAL1-204ENST00000412913 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
SMARCAL1-204ENST00000412913 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
SMARCAL1-204ENST00000412913 ZNF496Q96IT1 587 aaPredicted RBP13.66□□□□□ -0.22
SMARCAL1-204ENST00000412913 ASAP1Q9ULH1 1129 aa13.66□□□□□ -0.22
SMARCAL1-204ENST00000412913 SOS1Q07889 1333 aaPredicted RBP13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 HOXB7P09629 217 aa13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 RARSP54136 660 aaKnown RBP13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 PALLDQ8WX93 1383 aa13.65□□□□□ -0.22
SMARCAL1-204ENST00000412913 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-204ENST00000412913 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-204ENST00000412913 TTC5Q8N0Z6 440 aa13.64□□□□□ -0.23
SMARCAL1-204ENST00000412913 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
SMARCAL1-204ENST00000412913 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-204ENST00000412913 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
SMARCAL1-204ENST00000412913 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
SMARCAL1-204ENST00000412913 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
SMARCAL1-204ENST00000412913 C4BP0C0L5 1744 aa13.62□□□□□ -0.23
SMARCAL1-204ENST00000412913 BCAR3O75815 825 aa13.62□□□□□ -0.23
SMARCAL1-204ENST00000412913 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
SMARCAL1-204ENST00000412913 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
SMARCAL1-204ENST00000412913 ARFGEF2Q9Y6D5 1785 aa13.62□□□□□ -0.23
SMARCAL1-204ENST00000412913 TUBGCP6Q96RT7 1819 aa13.62□□□□□ -0.23
SMARCAL1-204ENST00000412913 BCORQ6W2J9 1755 aa13.61□□□□□ -0.23
SMARCAL1-204ENST00000412913 BCL2L13Q9BXK5 485 aa13.61□□□□□ -0.23
SMARCAL1-204ENST00000412913 BCL11BQ9C0K0 894 aaPredicted RBP13.61□□□□□ -0.23
SMARCAL1-204ENST00000412913 C4AP0C0L4 1744 aa13.61□□□□□ -0.23
SMARCAL1-204ENST00000412913 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-204ENST00000412913 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
SMARCAL1-204ENST00000412913 VSIG10Q8N0Z9 540 aa13.6□□□□□ -0.23
SMARCAL1-204ENST00000412913 MRPL50Q8N5N7 158 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-204ENST00000412913 SCN7AQ01118 1682 aa13.59□□□□□ -0.23
SMARCAL1-204ENST00000412913 UBR3Q6ZT12 1888 aa13.59□□□□□ -0.23
SMARCAL1-204ENST00000412913 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
SMARCAL1-204ENST00000412913 RRP1P56182 461 aaKnown RBP13.59□□□□□ -0.23
SMARCAL1-204ENST00000412913 HDGFL1Q5TGJ6 251 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms