RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 ATG3Q9NT62 314 aa25.59■■□□□ 1.69
ITGA6-204ENST00000412899 IGSF1Q8N6C5 1336 aa25.58■■□□□ 1.69
ITGA6-204ENST00000412899 PLEKHG2Q9H7P9 1386 aa25.57■■□□□ 1.68
ITGA6-204ENST00000412899 HSP90AB1P08238 724 aaKnown RBP25.55■■□□□ 1.68
ITGA6-204ENST00000412899 PLEKHO1Q53GL0 409 aaPredicted RBP25.55■■□□□ 1.68
ITGA6-204ENST00000412899 ERVV-2B6SEH9 535 aa25.54■■□□□ 1.68
ITGA6-204ENST00000412899 DCAF5Q96JK2 942 aa25.54■■□□□ 1.68
ITGA6-204ENST00000412899 RBM42Q9BTD8 480 aaKnown RBP25.54■■□□□ 1.68
ITGA6-204ENST00000412899 MORC1Q86VD1 984 aa25.53■■□□□ 1.68
ITGA6-204ENST00000412899 WWC3Q9ULE0 1092 aa25.53■■□□□ 1.68
ITGA6-204ENST00000412899 AMOTQ4VCS5 1084 aa25.52■■□□□ 1.68
ITGA6-204ENST00000412899 ZNF530Q6P9A1 599 aaPredicted RBP25.51■■□□□ 1.67
ITGA6-204ENST00000412899 RTCBQ9Y3I0 505 aaKnown RBP25.51■■□□□ 1.67
ITGA6-204ENST00000412899 CABP4P57796 275 aa25.5■■□□□ 1.67
ITGA6-204ENST00000412899 TRAPPC3LQ5T215 181 aa25.5■■□□□ 1.67
ITGA6-204ENST00000412899 ATP10DQ9P241 1426 aa25.5■■□□□ 1.67
ITGA6-204ENST00000412899 KDRP35968 1356 aa25.49■■□□□ 1.67
ITGA6-204ENST00000412899 MMP10P09238 476 aa25.48■■□□□ 1.67
ITGA6-204ENST00000412899 SLC4A9Q96Q91 983 aa25.48■■□□□ 1.67
ITGA6-204ENST00000412899 GOLGB1Q14789 3259 aaKnown RBP25.48■■□□□ 1.67
ITGA6-204ENST00000412899 MTHFSP49914 203 aa25.47■■□□□ 1.67
ITGA6-204ENST00000412899 C1orf141Q5JVX7 400 aa25.47■■□□□ 1.67
ITGA6-204ENST00000412899 GPBP1L1Q9HC44 474 aaPredicted RBP25.47■■□□□ 1.67
ITGA6-204ENST00000412899 KNSTRNQ9Y448 316 aa25.47■■□□□ 1.67
ITGA6-204ENST00000412899 AEBP1Q8IUX7 1158 aa25.46■■□□□ 1.67
ITGA6-204ENST00000412899 NLGN1Q8N2Q7 840 aa25.46■■□□□ 1.67
ITGA6-204ENST00000412899 KDM6AO15550 1401 aaPredicted RBP25.46■■□□□ 1.67
ITGA6-204ENST00000412899 RC3H1Q5TC82 1133 aaKnown RBP25.45■■□□□ 1.66
ITGA6-204ENST00000412899 SULT6B1Q6IMI4 303 aa25.44■■□□□ 1.66
ITGA6-204ENST00000412899 ARHGEF1Q92888 912 aaKnown RBP25.44■■□□□ 1.66
ITGA6-204ENST00000412899 CNTNAP4Q9C0A0 1308 aa25.43■■□□□ 1.66
ITGA6-204ENST00000412899 RPS6KA4O75676 772 aa25.43■■□□□ 1.66
ITGA6-204ENST00000412899 ADRA2BP18089 450 aa25.43■■□□□ 1.66
ITGA6-204ENST00000412899 RFC4P35249 363 aa25.43■■□□□ 1.66
ITGA6-204ENST00000412899 ZNF526Q8TF50 670 aaPredicted RBP25.43■■□□□ 1.66
ITGA6-204ENST00000412899 ZNF831Q5JPB2 1677 aa25.42■■□□□ 1.66
ITGA6-204ENST00000412899 PTCD1O75127 700 aaKnown RBP25.42■■□□□ 1.66
ITGA6-204ENST00000412899 NFATC2IPQ8NCF5 419 aa25.41■■□□□ 1.66
ITGA6-204ENST00000412899 ADCY9O60503 1353 aa25.41■■□□□ 1.66
ITGA6-204ENST00000412899 CICQ96RK0 1608 aaPredicted RBP25.39■■□□□ 1.66
ITGA6-204ENST00000412899 TGFB2P61812 414 aa25.39■■□□□ 1.66
ITGA6-204ENST00000412899 COL5A3P25940 1745 aaPredicted RBP25.38■■□□□ 1.65
ITGA6-204ENST00000412899 GYS1P13807 737 aa25.38■■□□□ 1.65
ITGA6-204ENST00000412899 IL13P35225 146 aa25.38■■□□□ 1.65
ITGA6-204ENST00000412899 CCDC87Q9NVE4 849 aa25.38■■□□□ 1.65
ITGA6-204ENST00000412899 PXDNLA1KZ92 1463 aa25.37■■□□□ 1.65
ITGA6-204ENST00000412899 PARP3Q9Y6F1 533 aa25.37■■□□□ 1.65
ITGA6-204ENST00000412899 A0A0G2JLW4 131 aa25.36■■□□□ 1.65
ITGA6-204ENST00000412899 CRKLP46109 303 aaKnown RBP25.36■■□□□ 1.65
ITGA6-204ENST00000412899 BCS1LQ9Y276 419 aa25.36■■□□□ 1.65
ITGA6-204ENST00000412899 AMER1Q5JTC6 1135 aaPredicted RBP25.34■■□□□ 1.65
ITGA6-204ENST00000412899 KIF13BQ9NQT8 1826 aa25.34■■□□□ 1.65
ITGA6-204ENST00000412899 C10orf71Q711Q0 1435 aa25.34■■□□□ 1.65
ITGA6-204ENST00000412899 AKAP4Q5JQC9 854 aa25.33■■□□□ 1.65
ITGA6-204ENST00000412899 C4AP0C0L4 1744 aa25.32■■□□□ 1.64
ITGA6-204ENST00000412899 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
ITGA6-204ENST00000412899 MYH14Q7Z406 1995 aaKnown RBP25.31■■□□□ 1.64
ITGA6-204ENST00000412899 DPEP1P16444 411 aa25.31■■□□□ 1.64
ITGA6-204ENST00000412899 KIAA1551Q9HCM1 1747 aa25.3■■□□□ 1.64
ITGA6-204ENST00000412899 SRP68Q9UHB9 627 aaKnown RBP25.3■■□□□ 1.64
ITGA6-204ENST00000412899 KIF7Q2M1P5 1343 aa25.3■■□□□ 1.64
ITGA6-204ENST00000412899 FCHSD2O94868 740 aa25.29■■□□□ 1.64
ITGA6-204ENST00000412899 HMOX1P09601 288 aa25.29■■□□□ 1.64
ITGA6-204ENST00000412899 ARHGAP27Q6ZUM4 889 aa25.29■■□□□ 1.64
ITGA6-204ENST00000412899 SLC52A2Q9HAB3 445 aa25.29■■□□□ 1.64
ITGA6-204ENST00000412899 SCN11AQ9UI33 1791 aa25.28■■□□□ 1.64
ITGA6-204ENST00000412899 LGR6Q9HBX8 967 aa25.28■■□□□ 1.64
ITGA6-204ENST00000412899 USP42Q9H9J4 1324 aaKnown RBP25.28■■□□□ 1.64
ITGA6-204ENST00000412899 FKBP8Q14318 412 aa25.27■■□□□ 1.64
ITGA6-204ENST00000412899 TJP1Q07157 1748 aa25.26■■□□□ 1.63
ITGA6-204ENST00000412899 INTS5Q6P9B9 1019 aaKnown RBP25.26■■□□□ 1.63
ITGA6-204ENST00000412899 DNAJC10Q8IXB1 793 aa25.26■■□□□ 1.63
ITGA6-204ENST00000412899 RNMTO43148 476 aaKnown RBP25.25■■□□□ 1.63
ITGA6-204ENST00000412899 HSPA6P17066 643 aa25.25■■□□□ 1.63
ITGA6-204ENST00000412899 CC2D1BQ5T0F9 858 aaKnown RBP25.25■■□□□ 1.63
ITGA6-204ENST00000412899 KIF3CO14782 793 aa25.24■■□□□ 1.63
ITGA6-204ENST00000412899 DIAPH1O60610 1272 aaKnown RBP25.24■■□□□ 1.63
ITGA6-204ENST00000412899 PIM2Q9P1W9 311 aa25.24■■□□□ 1.63
ITGA6-204ENST00000412899 ZPR1O75312 459 aa25.23■■□□□ 1.63
ITGA6-204ENST00000412899 KCNA3P22001 575 aa25.23■■□□□ 1.63
ITGA6-204ENST00000412899 DDR1Q08345 913 aa25.23■■□□□ 1.63
ITGA6-204ENST00000412899 SLC39A6Q13433 755 aa25.23■■□□□ 1.63
ITGA6-204ENST00000412899 PER1O15534 1290 aaPredicted RBP25.22■■□□□ 1.63
ITGA6-204ENST00000412899 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
ITGA6-204ENST00000412899 CYP19A1P11511 503 aaPredicted RBP25.2■■□□□ 1.62
ITGA6-204ENST00000412899 USPL1Q5W0Q7 1092 aa25.2■■□□□ 1.62
ITGA6-204ENST00000412899 DALRD3Q5D0E6 543 aaKnown RBP25.19■■□□□ 1.62
ITGA6-204ENST00000412899 MRC1P22897 1456 aa25.19■■□□□ 1.62
ITGA6-204ENST00000412899 SOS1Q07889 1333 aaPredicted RBP25.18■■□□□ 1.62
ITGA6-204ENST00000412899 BRCA1P38398 1863 aaKnown RBP25.18■■□□□ 1.62
ITGA6-204ENST00000412899 POLRMTO00411 1230 aaKnown RBP25.18■■□□□ 1.62
ITGA6-204ENST00000412899 TM4SF1P30408 202 aa25.18■■□□□ 1.62
ITGA6-204ENST00000412899 CNGB1Q14028 1251 aaPredicted RBP25.18■■□□□ 1.62
ITGA6-204ENST00000412899 CHRNA5P30532 468 aa25.17■■□□□ 1.62
ITGA6-204ENST00000412899 C9orf131Q5VYM1 1079 aa25.16■■□□□ 1.62
ITGA6-204ENST00000412899 ADAMTS7Q9UKP4 1686 aa25.16■■□□□ 1.62
ITGA6-204ENST00000412899 TOMM70O94826 608 aa25.15■■□□□ 1.62
ITGA6-204ENST00000412899 VSIG10Q8N0Z9 540 aa25.15■■□□□ 1.62
ITGA6-204ENST00000412899 NARFQ9UHQ1 456 aa25.15■■□□□ 1.62
ITGA6-204ENST00000412899 ZBTB1Q9Y2K1 713 aa25.15■■□□□ 1.62
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