RNA–Protein interactions for RNA: ENST00000412738.5

RBM39-207, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-207ENST00000412738 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
RBM39-207ENST00000412738 YY1P25490 414 aa18.6■□□□□ 0.57
RBM39-207ENST00000412738 PHF14O94880 888 aa18.59■□□□□ 0.57
RBM39-207ENST00000412738 HMOX1P09601 288 aa18.59■□□□□ 0.57
RBM39-207ENST00000412738 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
RBM39-207ENST00000412738 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
RBM39-207ENST00000412738 LINC00116Q8NCU8 138 aa18.58■□□□□ 0.56
RBM39-207ENST00000412738 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.56
RBM39-207ENST00000412738 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
RBM39-207ENST00000412738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.56■□□□□ 0.56
RBM39-207ENST00000412738 SSFA2P28290 1259 aa18.56■□□□□ 0.56
RBM39-207ENST00000412738 AKAP4Q5JQC9 854 aa18.56■□□□□ 0.56
RBM39-207ENST00000412738 COL24A1Q17RW2 1714 aa18.55■□□□□ 0.56
RBM39-207ENST00000412738 GNPATO15228 680 aa18.55■□□□□ 0.56
RBM39-207ENST00000412738 ITPK1Q13572 414 aa18.55■□□□□ 0.56
RBM39-207ENST00000412738 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
RBM39-207ENST00000412738 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
RBM39-207ENST00000412738 GPR162Q16538 588 aa18.54■□□□□ 0.56
RBM39-207ENST00000412738 CFAP53Q96M91 514 aa18.53■□□□□ 0.56
RBM39-207ENST00000412738 UBR3Q6ZT12 1888 aa18.52■□□□□ 0.56
RBM39-207ENST00000412738 PELP1Q8IZL8 1130 aaKnown RBP18.52■□□□□ 0.56
RBM39-207ENST00000412738 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
RBM39-207ENST00000412738 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
RBM39-207ENST00000412738 PTCD1O75127 700 aaKnown RBP18.51■□□□□ 0.55
RBM39-207ENST00000412738 SMIM5Q71RC9 77 aa18.51■□□□□ 0.55
RBM39-207ENST00000412738 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
RBM39-207ENST00000412738 MTHFSDQ2M296 383 aaKnown RBP18.5■□□□□ 0.55
RBM39-207ENST00000412738 TRAPPC3LQ5T215 181 aa18.5■□□□□ 0.55
RBM39-207ENST00000412738 NLGN2Q8NFZ4 835 aa18.49■□□□□ 0.55
RBM39-207ENST00000412738 SLC4A9Q96Q91 983 aa18.49■□□□□ 0.55
RBM39-207ENST00000412738 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
RBM39-207ENST00000412738 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
RBM39-207ENST00000412738 ZNF831Q5JPB2 1677 aa18.48■□□□□ 0.55
RBM39-207ENST00000412738 RNMTO43148 476 aaKnown RBP18.48■□□□□ 0.55
RBM39-207ENST00000412738 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
RBM39-207ENST00000412738 LGR6Q9HBX8 967 aa18.48■□□□□ 0.55
RBM39-207ENST00000412738 NUDCQ9Y266 331 aa18.48■□□□□ 0.55
RBM39-207ENST00000412738 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
RBM39-207ENST00000412738 COL3A1P02461 1466 aaPredicted RBP18.47■□□□□ 0.55
RBM39-207ENST00000412738 CD2APQ9Y5K6 639 aa18.47■□□□□ 0.55
RBM39-207ENST00000412738 ADRA2BP18089 450 aa18.46■□□□□ 0.55
RBM39-207ENST00000412738 RFC4P35249 363 aa18.46■□□□□ 0.55
RBM39-207ENST00000412738 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
RBM39-207ENST00000412738 RPS6KA4O75676 772 aa18.45■□□□□ 0.54
RBM39-207ENST00000412738 COL5A3P25940 1745 aaPredicted RBP18.44■□□□□ 0.54
RBM39-207ENST00000412738 PPP2R1AP30153 589 aa18.44■□□□□ 0.54
RBM39-207ENST00000412738 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
RBM39-207ENST00000412738 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
RBM39-207ENST00000412738 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
RBM39-207ENST00000412738 NLGN1Q8N2Q7 840 aa18.43■□□□□ 0.54
RBM39-207ENST00000412738 GRIN3BO60391 1043 aa18.42■□□□□ 0.54
RBM39-207ENST00000412738 TEFQ10587 303 aa18.42■□□□□ 0.54
RBM39-207ENST00000412738 SLC39A6Q13433 755 aa18.42■□□□□ 0.54
RBM39-207ENST00000412738 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
RBM39-207ENST00000412738 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
RBM39-207ENST00000412738 MRC1P22897 1456 aa18.41■□□□□ 0.54
RBM39-207ENST00000412738 MMP10P09238 476 aa18.41■□□□□ 0.54
RBM39-207ENST00000412738 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
RBM39-207ENST00000412738 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
RBM39-207ENST00000412738 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.544e-22■□□□□ 9.6
RBM39-207ENST00000412738 CHD4Q14839 1912 aa18.41■□□□□ 0.54
RBM39-207ENST00000412738 DNAJC10Q8IXB1 793 aa18.39■□□□□ 0.53
RBM39-207ENST00000412738 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
RBM39-207ENST00000412738 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
RBM39-207ENST00000412738 TJP1Q07157 1748 aa18.37■□□□□ 0.53
RBM39-207ENST00000412738 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
RBM39-207ENST00000412738 GYS1P13807 737 aa18.37■□□□□ 0.53
RBM39-207ENST00000412738 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
RBM39-207ENST00000412738 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
RBM39-207ENST00000412738 CCDC87Q9NVE4 849 aa18.37■□□□□ 0.53
RBM39-207ENST00000412738 ADAMTS7Q9UKP4 1686 aa18.37■□□□□ 0.53
RBM39-207ENST00000412738 ZPR1O75312 459 aa18.36■□□□□ 0.53
RBM39-207ENST00000412738 FCHSD2O94868 740 aa18.36■□□□□ 0.53
RBM39-207ENST00000412738 NEFMP07197 916 aa18.36■□□□□ 0.53
RBM39-207ENST00000412738 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
RBM39-207ENST00000412738 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
RBM39-207ENST00000412738 IL17REQ8NFR9 667 aa18.36■□□□□ 0.53
RBM39-207ENST00000412738 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
RBM39-207ENST00000412738 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
RBM39-207ENST00000412738 CICQ96RK0 1608 aaPredicted RBP18.36■□□□□ 0.53
RBM39-207ENST00000412738 KCPQ6ZWJ8 1503 aa18.34■□□□□ 0.53
RBM39-207ENST00000412738 USP42Q9H9J4 1324 aaKnown RBP18.34■□□□□ 0.53
RBM39-207ENST00000412738 STARD3NLO95772 234 aa18.34■□□□□ 0.53
RBM39-207ENST00000412738 CYP19A1P11511 503 aaPredicted RBP18.34■□□□□ 0.53
RBM39-207ENST00000412738 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
RBM39-207ENST00000412738 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
RBM39-207ENST00000412738 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
RBM39-207ENST00000412738 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.52
RBM39-207ENST00000412738 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
RBM39-207ENST00000412738 TGFB2P61812 414 aa18.32■□□□□ 0.52
RBM39-207ENST00000412738 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
RBM39-207ENST00000412738 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
RBM39-207ENST00000412738 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
RBM39-207ENST00000412738 FKBP8Q14318 412 aa18.31■□□□□ 0.52
RBM39-207ENST00000412738 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
RBM39-207ENST00000412738 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
RBM39-207ENST00000412738 COL15A1P39059 1388 aa18.3■□□□□ 0.52
RBM39-207ENST00000412738 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
RBM39-207ENST00000412738 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
RBM39-207ENST00000412738 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms