RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TRIM66O15016 1216 aa8.64□□□□□ -1.03
LINC00342-201ENST00000412393 ZC3H15Q8WU90 426 aaKnown RBP8.64□□□□□ -1.03
LINC00342-201ENST00000412393 AGBL1Q96MI9 1066 aa8.64□□□□□ -1.03
LINC00342-201ENST00000412393 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
LINC00342-201ENST00000412393 MAP3K4Q9Y6R4 1608 aa8.64□□□□□ -1.03
LINC00342-201ENST00000412393 ADH1AP07327 375 aa8.63□□□□□ -1.03
LINC00342-201ENST00000412393 PTK2Q05397 1052 aa8.63□□□□□ -1.03
LINC00342-201ENST00000412393 GAS6Q14393 721 aa8.63□□□□□ -1.03
LINC00342-201ENST00000412393 LYSMD3Q7Z3D4 306 aa8.63□□□□□ -1.03
LINC00342-201ENST00000412393 AK7Q96M32 723 aa8.63□□□□□ -1.03
LINC00342-201ENST00000412393 WDR7Q9Y4E6 1490 aa8.63□□□□□ -1.03
LINC00342-201ENST00000412393 ALYREFQ86V81 257 aaKnown RBP8.62□□□□□ -1.03
LINC00342-201ENST00000412393 RAPGEF6Q8TEU7 1601 aa8.62□□□□□ -1.03
LINC00342-201ENST00000412393 BCRP11274 1271 aa8.61□□□□□ -1.03
LINC00342-201ENST00000412393 RANGAP1P46060 587 aaPredicted RBP8.61□□□□□ -1.03
LINC00342-201ENST00000412393 CLK2P49760 499 aaKnown RBP8.61□□□□□ -1.03
LINC00342-201ENST00000412393 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
LINC00342-201ENST00000412393 TRIM22Q8IYM9 498 aa8.61□□□□□ -1.03
LINC00342-201ENST00000412393 GALNT6Q8NCL4 622 aa8.61□□□□□ -1.03
LINC00342-201ENST00000412393 CFAP43Q8NDM7 1665 aa8.61□□□□□ -1.03
LINC00342-201ENST00000412393 PTGIRP43119 386 aa8.6□□□□□ -1.03
LINC00342-201ENST00000412393 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
LINC00342-201ENST00000412393 TEX14Q8IWB6 1497 aa8.59□□□□□ -1.03
LINC00342-201ENST00000412393 ARID3CA6NKF2 412 aa8.59□□□□□ -1.03
LINC00342-201ENST00000412393 H7C1W4 665 aa8.59□□□□□ -1.03
LINC00342-201ENST00000412393 PROCP04070 461 aa8.59□□□□□ -1.03
LINC00342-201ENST00000412393 FOXD4L5Q5VV16 416 aaPredicted RBP8.59□□□□□ -1.03
LINC00342-201ENST00000412393 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
LINC00342-201ENST00000412393 NEDD1Q8NHV4 660 aa8.59□□□□□ -1.03
LINC00342-201ENST00000412393 NSFL1CQ9UNZ2 370 aaKnown RBP8.59□□□□□ -1.03
LINC00342-201ENST00000412393 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
LINC00342-201ENST00000412393 ATP10BO94823 1461 aa8.58□□□□□ -1.04
LINC00342-201ENST00000412393 FHOD3Q2V2M9 1422 aa8.58□□□□□ -1.04
LINC00342-201ENST00000412393 UBTFP17480 764 aaKnown RBP8.58□□□□□ -1.04
LINC00342-201ENST00000412393 GPC1P35052 558 aa8.58□□□□□ -1.04
LINC00342-201ENST00000412393 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
LINC00342-201ENST00000412393 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
LINC00342-201ENST00000412393 CNTNAP5Q8WYK1 1306 aa8.57□□□□□ -1.04
LINC00342-201ENST00000412393 CD109Q6YHK3 1445 aa8.57□□□□□ -1.04
LINC00342-201ENST00000412393 K7ELQ4 463 aaPredicted RBP8.57□□□□□ -1.04
LINC00342-201ENST00000412393 SEPT12Q8IYM1 358 aa8.57□□□□□ -1.04
LINC00342-201ENST00000412393 ZNF784Q8NCA9 323 aaPredicted RBP8.57□□□□□ -1.04
LINC00342-201ENST00000412393 LILRA1O75019 489 aa8.56□□□□□ -1.04
LINC00342-201ENST00000412393 CTDSPL2Q05D32 466 aa8.56□□□□□ -1.04
LINC00342-201ENST00000412393 PPP2R2DQ66LE6 453 aa8.56□□□□□ -1.04
LINC00342-201ENST00000412393 ADAM32Q8TC27 787 aa8.56□□□□□ -1.04
LINC00342-201ENST00000412393 TRERF1Q96PN7 1200 aa8.56□□□□□ -1.04
LINC00342-201ENST00000412393 CUEDC1Q9NWM3 386 aaPredicted RBP8.56□□□□□ -1.04
LINC00342-201ENST00000412393 MAGI3Q5TCQ9 1506 aa8.55□□□□□ -1.04
LINC00342-201ENST00000412393 ITGB2P05107 769 aa8.55□□□□□ -1.04
LINC00342-201ENST00000412393 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
LINC00342-201ENST00000412393 DYRK1BQ9Y463 629 aa8.55□□□□□ -1.04
LINC00342-201ENST00000412393 NUP153P49790 1475 aaKnown RBP8.55□□□□□ -1.04
LINC00342-201ENST00000412393 COL17A1Q9UMD9 1497 aaPredicted RBP8.55□□□□□ -1.04
LINC00342-201ENST00000412393 ABCA9Q8IUA7 1624 aa8.54□□□□□ -1.04
LINC00342-201ENST00000412393 KDF1Q8NAX2 398 aaPredicted RBP8.54□□□□□ -1.04
LINC00342-201ENST00000412393 TMPRSS4Q9NRS4 437 aa8.53□□□□□ -1.04
LINC00342-201ENST00000412393 ESPNB1AK53 854 aa8.52□□□□□ -1.05
LINC00342-201ENST00000412393 ERVH48-1M5A8F1 160 aa8.52□□□□□ -1.05
LINC00342-201ENST00000412393 PDE4DQ08499 809 aa8.52□□□□□ -1.05
LINC00342-201ENST00000412393 ACDQ96AP0 544 aa8.52□□□□□ -1.05
LINC00342-201ENST00000412393 OCSTAMPQ9BR26 566 aa8.52□□□□□ -1.05
LINC00342-201ENST00000412393 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
LINC00342-201ENST00000412393 OIP5O43482 229 aa8.51□□□□□ -1.05
LINC00342-201ENST00000412393 ADD1P35611 737 aaKnown RBP8.51□□□□□ -1.05
LINC00342-201ENST00000412393 WDR44Q5JSH3 913 aa8.51□□□□□ -1.05
LINC00342-201ENST00000412393 PRICKLE2Q7Z3G6 844 aa8.51□□□□□ -1.05
LINC00342-201ENST00000412393 DZIP3Q86Y13 1208 aaKnown RBP8.51□□□□□ -1.05
LINC00342-201ENST00000412393 PLEKHD1A6NEE1 506 aa8.5□□□□□ -1.05
LINC00342-201ENST00000412393 MX2P20592 715 aa8.5□□□□□ -1.05
LINC00342-201ENST00000412393 MAP2K3P46734 347 aa8.5□□□□□ -1.05
LINC00342-201ENST00000412393 DBN1Q16643 649 aa8.5□□□□□ -1.05
LINC00342-201ENST00000412393 FMN1Q68DA7 1419 aa8.5□□□□□ -1.05
LINC00342-201ENST00000412393 LRRN4Q8WUT4 740 aa8.5□□□□□ -1.05
LINC00342-201ENST00000412393 HECW1Q76N89 1606 aa8.5□□□□□ -1.05
LINC00342-201ENST00000412393 NR6A1Q15406 480 aa8.49□□□□□ -1.05
LINC00342-201ENST00000412393 RIPOR1Q6ZS17 1223 aa8.49□□□□□ -1.05
LINC00342-201ENST00000412393 KRTAP4-8Q9BYQ9 185 aa8.49□□□□□ -1.05
LINC00342-201ENST00000412393 MKL2Q9ULH7 1088 aa8.49□□□□□ -1.05
LINC00342-201ENST00000412393 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
LINC00342-201ENST00000412393 CDK13Q14004 1512 aaKnown RBP8.49□□□□□ -1.05
LINC00342-201ENST00000412393 ARAP3Q8WWN8 1544 aa8.49□□□□□ -1.05
LINC00342-201ENST00000412393 ATP5J2-PTCD1G3V325 749 aa8.48□□□□□ -1.05
LINC00342-201ENST00000412393 PIK3R2O00459 728 aa8.48□□□□□ -1.05
LINC00342-201ENST00000412393 BAG6P46379 1132 aa8.48□□□□□ -1.05
LINC00342-201ENST00000412393 LRRIQ1Q96JM4 1722 aa8.48□□□□□ -1.05
LINC00342-201ENST00000412393 PHLDB1Q86UU1 1377 aa8.48□□□□□ -1.05
LINC00342-201ENST00000412393 ADGRL1O94910 1474 aa8.47□□□□□ -1.05
LINC00342-201ENST00000412393 NEO1Q92859 1461 aa8.47□□□□□ -1.05
LINC00342-201ENST00000412393 GPR25O00155 361 aa8.47□□□□□ -1.05
LINC00342-201ENST00000412393 RHOQP17081 205 aa8.47□□□□□ -1.05
LINC00342-201ENST00000412393 GTPBP3Q969Y2 492 aaKnown RBP8.47□□□□□ -1.05
LINC00342-201ENST00000412393 POLR3EQ9NVU0 708 aa8.47□□□□□ -1.05
LINC00342-201ENST00000412393 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.46□□□□□ -1.05
LINC00342-201ENST00000412393 Q8N3U1 123 aa8.46□□□□□ -1.06
LINC00342-201ENST00000412393 CFHR5Q9BXR6 569 aa8.46□□□□□ -1.06
LINC00342-201ENST00000412393 OXCT2Q9BYC2 517 aaPredicted RBP8.46□□□□□ -1.06
LINC00342-201ENST00000412393 TTC37Q6PGP7 1564 aa8.46□□□□□ -1.06
LINC00342-201ENST00000412393 CFAP74Q9C0B2 1584 aa8.46□□□□□ -1.06
LINC00342-201ENST00000412393 RAB15P59190 212 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms