RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 TUBGCP6Q96RT7 1819 aa15.7■□□□□ 0.1
LINC00963-201ENST00000412141 QSER1Q2KHR3 1735 aa15.69■□□□□ 0.1
LINC00963-201ENST00000412141 ERVV-2B6SEH9 535 aa15.69■□□□□ 0.1
LINC00963-201ENST00000412141 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
LINC00963-201ENST00000412141 MAP3K5Q99683 1374 aa15.69■□□□□ 0.1
LINC00963-201ENST00000412141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.68■□□□□ 0.1
LINC00963-201ENST00000412141 U2SURPO15042 1029 aaKnown RBP15.68■□□□□ 0.1
LINC00963-201ENST00000412141 GNPATO15228 680 aa15.68■□□□□ 0.1
LINC00963-201ENST00000412141 PTCD1O75127 700 aaKnown RBP15.68■□□□□ 0.1
LINC00963-201ENST00000412141 NFATC2IPQ8NCF5 419 aa15.68■□□□□ 0.1
LINC00963-201ENST00000412141 C5P01031 1676 aa15.67■□□□□ 0.1
LINC00963-201ENST00000412141 FLAD1Q8NFF5 587 aa15.67■□□□□ 0.1
LINC00963-201ENST00000412141 KDM6AO15550 1401 aaPredicted RBP15.67■□□□□ 0.1
LINC00963-201ENST00000412141 GPR162Q16538 588 aa15.66■□□□□ 0.1
LINC00963-201ENST00000412141 NLGN2Q8NFZ4 835 aa15.66■□□□□ 0.1
LINC00963-201ENST00000412141 SLC4A9Q96Q91 983 aa15.66■□□□□ 0.1
LINC00963-201ENST00000412141 COL24A1Q17RW2 1714 aa15.65■□□□□ 0.1
LINC00963-201ENST00000412141 KDRP35968 1356 aa15.65■□□□□ 0.1
LINC00963-201ENST00000412141 HMGB2P26583 209 aaKnown RBP15.65■□□□□ 0.1
LINC00963-201ENST00000412141 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
LINC00963-201ENST00000412141 LGR6Q9HBX8 967 aa15.65■□□□□ 0.1
LINC00963-201ENST00000412141 C4BP0C0L5 1744 aa15.65■□□□□ 0.1
LINC00963-201ENST00000412141 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
LINC00963-201ENST00000412141 MTHFSDQ2M296 383 aaKnown RBP15.63■□□□□ 0.09
LINC00963-201ENST00000412141 AKAP4Q5JQC9 854 aa15.63■□□□□ 0.09
LINC00963-201ENST00000412141 PLEKHG2Q9H7P9 1386 aa15.62■□□□□ 0.09
LINC00963-201ENST00000412141 SSFA2P28290 1259 aa15.62■□□□□ 0.09
LINC00963-201ENST00000412141 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
LINC00963-201ENST00000412141 RNMTO43148 476 aaKnown RBP15.61■□□□□ 0.09
LINC00963-201ENST00000412141 WWC3Q9ULE0 1092 aa15.61■□□□□ 0.09
LINC00963-201ENST00000412141 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
LINC00963-201ENST00000412141 SLC39A6Q13433 755 aa15.6■□□□□ 0.09
LINC00963-201ENST00000412141 TRAPPC3LQ5T215 181 aa15.6■□□□□ 0.09
LINC00963-201ENST00000412141 CFAP53Q96M91 514 aa15.59■□□□□ 0.09
LINC00963-201ENST00000412141 SLC52A2Q9HAB3 445 aa15.59■□□□□ 0.09
LINC00963-201ENST00000412141 PPP2R1AP30153 589 aa15.58■□□□□ 0.08
LINC00963-201ENST00000412141 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.08
LINC00963-201ENST00000412141 UBR3Q6ZT12 1888 aa15.57■□□□□ 0.08
LINC00963-201ENST00000412141 MMP10P09238 476 aa15.57■□□□□ 0.08
LINC00963-201ENST00000412141 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
LINC00963-201ENST00000412141 COL3A1P02461 1466 aaPredicted RBP15.57■□□□□ 0.08
LINC00963-201ENST00000412141 RPS6KA4O75676 772 aa15.56■□□□□ 0.08
LINC00963-201ENST00000412141 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
LINC00963-201ENST00000412141 YBX3P16989 372 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC00963-201ENST00000412141 RFC4P35249 363 aa15.56■□□□□ 0.08
LINC00963-201ENST00000412141 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
LINC00963-201ENST00000412141 RC3H1Q5TC82 1133 aaKnown RBP15.56■□□□□ 0.08
LINC00963-201ENST00000412141 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
LINC00963-201ENST00000412141 CHD4Q14839 1912 aa15.56■□□□□ 0.08
LINC00963-201ENST00000412141 CNTNAP4Q9C0A0 1308 aa15.55■□□□□ 0.08
LINC00963-201ENST00000412141 PRKAR2BP31323 418 aa15.55■□□□□ 0.08
LINC00963-201ENST00000412141 PHACTR3Q96KR7 559 aa15.55■□□□□ 0.08
LINC00963-201ENST00000412141 NUDCQ9Y266 331 aa15.55■□□□□ 0.08
LINC00963-201ENST00000412141 CD2APQ9Y5K6 639 aa15.55■□□□□ 0.08
LINC00963-201ENST00000412141 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
LINC00963-201ENST00000412141 GNAT3A8MTJ3 354 aa15.53■□□□□ 0.08
LINC00963-201ENST00000412141 TEFQ10587 303 aa15.53■□□□□ 0.08
LINC00963-201ENST00000412141 IL17REQ8NFR9 667 aa15.53■□□□□ 0.08
LINC00963-201ENST00000412141 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
LINC00963-201ENST00000412141 SCN11AQ9UI33 1791 aa15.53■□□□□ 0.08
LINC00963-201ENST00000412141 GYS1P13807 737 aa15.52■□□□□ 0.08
LINC00963-201ENST00000412141 INTS5Q6P9B9 1019 aaKnown RBP15.52■□□□□ 0.08
LINC00963-201ENST00000412141 NLGN1Q8N2Q7 840 aa15.52■□□□□ 0.08
LINC00963-201ENST00000412141 RSPH6AQ9H0K4 717 aa15.52■□□□□ 0.08
LINC00963-201ENST00000412141 ADRA2BP18089 450 aa15.51■□□□□ 0.07
LINC00963-201ENST00000412141 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
LINC00963-201ENST00000412141 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
LINC00963-201ENST00000412141 MYH14Q7Z406 1995 aaKnown RBP15.51■□□□□ 0.07
LINC00963-201ENST00000412141 GRIN3BO60391 1043 aa15.49■□□□□ 0.07
LINC00963-201ENST00000412141 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
LINC00963-201ENST00000412141 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
LINC00963-201ENST00000412141 C1QTNF8P60827 252 aa15.49■□□□□ 0.07
LINC00963-201ENST00000412141 FKBP8Q14318 412 aa15.49■□□□□ 0.07
LINC00963-201ENST00000412141 PARP3Q9Y6F1 533 aa15.49■□□□□ 0.07
LINC00963-201ENST00000412141 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
LINC00963-201ENST00000412141 ZNF496Q96IT1 587 aaPredicted RBP15.48■□□□□ 0.07
LINC00963-201ENST00000412141 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
LINC00963-201ENST00000412141 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
LINC00963-201ENST00000412141 MRC1P22897 1456 aa15.47■□□□□ 0.07
LINC00963-201ENST00000412141 KCNQ3O43525 872 aa15.47■□□□□ 0.07
LINC00963-201ENST00000412141 ZPR1O75312 459 aa15.47■□□□□ 0.07
LINC00963-201ENST00000412141 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
LINC00963-201ENST00000412141 DCTN1Q14203 1278 aa15.47■□□□□ 0.07
LINC00963-201ENST00000412141 USPL1Q5W0Q7 1092 aa15.47■□□□□ 0.07
LINC00963-201ENST00000412141 MCM10Q7L590 875 aa15.47■□□□□ 0.07
LINC00963-201ENST00000412141 ZNF330Q9Y3S2 320 aaPredicted RBP15.47■□□□□ 0.07
LINC00963-201ENST00000412141 USP42Q9H9J4 1324 aaKnown RBP15.46■□□□□ 0.07
LINC00963-201ENST00000412141 TJP1Q07157 1748 aa15.46■□□□□ 0.07
LINC00963-201ENST00000412141 BTBD11A6QL63 1104 aa15.46■□□□□ 0.07
LINC00963-201ENST00000412141 FCHSD2O94868 740 aa15.46■□□□□ 0.07
LINC00963-201ENST00000412141 ZNF790Q6PG37 636 aa15.46■□□□□ 0.07
LINC00963-201ENST00000412141 RTF1Q92541 710 aaKnown RBP15.46■□□□□ 0.07
LINC00963-201ENST00000412141 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.07
LINC00963-201ENST00000412141 KCPQ6ZWJ8 1503 aa15.46■□□□□ 0.07
LINC00963-201ENST00000412141 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
LINC00963-201ENST00000412141 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
LINC00963-201ENST00000412141 DDR1Q08345 913 aa15.45■□□□□ 0.06
LINC00963-201ENST00000412141 CICQ96RK0 1608 aaPredicted RBP15.45■□□□□ 0.06
LINC00963-201ENST00000412141 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
LINC00963-201ENST00000412141 STARD3NLO95772 234 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 260.9 ms