RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 AMER1Q5JTC6 1135 aaPredicted RBP22.65■■□□□ 1.22
SCAMP4-203ENST00000411971 AK7Q96M32 723 aa22.65■■□□□ 1.22
SCAMP4-203ENST00000411971 VIRMAQ69YN4 1812 aaKnown RBP22.63■■□□□ 1.21
SCAMP4-203ENST00000411971 ZNF831Q5JPB2 1677 aa22.62■■□□□ 1.21
SCAMP4-203ENST00000411971 ATP6V1AP38606 617 aa22.62■■□□□ 1.21
SCAMP4-203ENST00000411971 PLEKHG2Q9H7P9 1386 aa22.62■■□□□ 1.21
SCAMP4-203ENST00000411971 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
SCAMP4-203ENST00000411971 IL13P35225 146 aa22.61■■□□□ 1.21
SCAMP4-203ENST00000411971 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
SCAMP4-203ENST00000411971 FLAD1Q8NFF5 587 aa22.61■■□□□ 1.21
SCAMP4-203ENST00000411971 KNSTRNQ9Y448 316 aa22.6■■□□□ 1.21
SCAMP4-203ENST00000411971 GNPATO15228 680 aa22.59■■□□□ 1.21
SCAMP4-203ENST00000411971 PER1O15534 1290 aaPredicted RBP22.59■■□□□ 1.21
SCAMP4-203ENST00000411971 SULT6B1Q6IMI4 303 aa22.59■■□□□ 1.21
SCAMP4-203ENST00000411971 C4AP0C0L4 1744 aa22.58■■□□□ 1.21
SCAMP4-203ENST00000411971 KIAA1551Q9HCM1 1747 aa22.58■■□□□ 1.21
SCAMP4-203ENST00000411971 ERVV-2B6SEH9 535 aa22.58■■□□□ 1.21
SCAMP4-203ENST00000411971 SSFA2P28290 1259 aa22.58■■□□□ 1.21
SCAMP4-203ENST00000411971 PLEKHO1Q53GL0 409 aaPredicted RBP22.58■■□□□ 1.21
SCAMP4-203ENST00000411971 DCAF5Q96JK2 942 aa22.58■■□□□ 1.21
SCAMP4-203ENST00000411971 TJP1Q07157 1748 aa22.57■■□□□ 1.2
SCAMP4-203ENST00000411971 RBM42Q9BTD8 480 aaKnown RBP22.56■■□□□ 1.2
SCAMP4-203ENST00000411971 WWC3Q9ULE0 1092 aa22.56■■□□□ 1.2
SCAMP4-203ENST00000411971 CD2APQ9Y5K6 639 aa22.56■■□□□ 1.2
SCAMP4-203ENST00000411971 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
SCAMP4-203ENST00000411971 MTHFSP49914 203 aa22.54■■□□□ 1.2
SCAMP4-203ENST00000411971 AMOTQ4VCS5 1084 aa22.54■■□□□ 1.2
SCAMP4-203ENST00000411971 CABP4P57796 275 aa22.53■■□□□ 1.2
SCAMP4-203ENST00000411971 N4BP2Q86UW6 1770 aaPredicted RBP22.53■■□□□ 1.2
SCAMP4-203ENST00000411971 HSP90AB1P08238 724 aaKnown RBP22.52■■□□□ 1.2
SCAMP4-203ENST00000411971 NFATC2IPQ8NCF5 419 aa22.52■■□□□ 1.2
SCAMP4-203ENST00000411971 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
SCAMP4-203ENST00000411971 CICQ96RK0 1608 aaPredicted RBP22.51■■□□□ 1.19
SCAMP4-203ENST00000411971 CC2D1BQ5T0F9 858 aaKnown RBP22.51■■□□□ 1.19
SCAMP4-203ENST00000411971 PTCD1O75127 700 aaKnown RBP22.5■■□□□ 1.19
SCAMP4-203ENST00000411971 HMOX1P09601 288 aa22.5■■□□□ 1.19
SCAMP4-203ENST00000411971 ARHGEF1Q92888 912 aaKnown RBP22.5■■□□□ 1.19
SCAMP4-203ENST00000411971 LGR6Q9HBX8 967 aa22.5■■□□□ 1.19
SCAMP4-203ENST00000411971 COL3A1P02461 1466 aaPredicted RBP22.49■■□□□ 1.19
SCAMP4-203ENST00000411971 HMGB2P26583 209 aaKnown RBP22.49■■□□□ 1.19
SCAMP4-203ENST00000411971 CNTNAP4Q9C0A0 1308 aa22.49■■□□□ 1.19
SCAMP4-203ENST00000411971 MMP10P09238 476 aa22.48■■□□□ 1.19
SCAMP4-203ENST00000411971 C1orf141Q5JVX7 400 aa22.48■■□□□ 1.19
SCAMP4-203ENST00000411971 GRIN3BO60391 1043 aa22.47■■□□□ 1.19
SCAMP4-203ENST00000411971 RC3H1Q5TC82 1133 aaKnown RBP22.47■■□□□ 1.19
SCAMP4-203ENST00000411971 RTCBQ9Y3I0 505 aaKnown RBP22.47■■□□□ 1.19
SCAMP4-203ENST00000411971 RPS6KA4O75676 772 aa22.46■■□□□ 1.19
SCAMP4-203ENST00000411971 GYS1P13807 737 aa22.46■■□□□ 1.19
SCAMP4-203ENST00000411971 CNGB1Q14028 1251 aaPredicted RBP22.46■■□□□ 1.19
SCAMP4-203ENST00000411971 TRAPPC3LQ5T215 181 aa22.46■■□□□ 1.19
SCAMP4-203ENST00000411971 MRC1P22897 1456 aa22.46■■□□□ 1.19
SCAMP4-203ENST00000411971 PXDNLA1KZ92 1463 aa22.45■■□□□ 1.18
SCAMP4-203ENST00000411971 BRCA1P38398 1863 aaKnown RBP22.45■■□□□ 1.18
SCAMP4-203ENST00000411971 CRKLP46109 303 aaKnown RBP22.44■■□□□ 1.18
SCAMP4-203ENST00000411971 C1QTNF8P60827 252 aa22.44■■□□□ 1.18
SCAMP4-203ENST00000411971 MTHFSDQ2M296 383 aaKnown RBP22.44■■□□□ 1.18
SCAMP4-203ENST00000411971 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
SCAMP4-203ENST00000411971 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
SCAMP4-203ENST00000411971 ADCY9O60503 1353 aa22.43■■□□□ 1.18
SCAMP4-203ENST00000411971 AKAP4Q5JQC9 854 aa22.43■■□□□ 1.18
SCAMP4-203ENST00000411971 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
SCAMP4-203ENST00000411971 ATP10DQ9P241 1426 aa22.42■■□□□ 1.18
SCAMP4-203ENST00000411971 RNMTO43148 476 aaKnown RBP22.42■■□□□ 1.18
SCAMP4-203ENST00000411971 SLC39A6Q13433 755 aa22.42■■□□□ 1.18
SCAMP4-203ENST00000411971 INTS5Q6P9B9 1019 aaKnown RBP22.42■■□□□ 1.18
SCAMP4-203ENST00000411971 SLC52A2Q9HAB3 445 aa22.42■■□□□ 1.18
SCAMP4-203ENST00000411971 UBR2Q8IWV8 1755 aa22.41■■□□□ 1.18
SCAMP4-203ENST00000411971 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
SCAMP4-203ENST00000411971 DNAJC10Q8IXB1 793 aa22.4■■□□□ 1.18
SCAMP4-203ENST00000411971 ADRA2BP18089 450 aa22.39■■□□□ 1.17
SCAMP4-203ENST00000411971 NLGN1Q8N2Q7 840 aa22.39■■□□□ 1.17
SCAMP4-203ENST00000411971 SIPA1L3O60292 1781 aaPredicted RBP22.39■■□□□ 1.17
SCAMP4-203ENST00000411971 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
SCAMP4-203ENST00000411971 A0A0G2JLW4 131 aa22.38■■□□□ 1.17
SCAMP4-203ENST00000411971 RFC4P35249 363 aa22.38■■□□□ 1.17
SCAMP4-203ENST00000411971 FKBP8Q14318 412 aa22.38■■□□□ 1.17
SCAMP4-203ENST00000411971 DDR1Q08345 913 aa22.37■■□□□ 1.17
SCAMP4-203ENST00000411971 USP42Q9H9J4 1324 aaKnown RBP22.36■■□□□ 1.17
SCAMP4-203ENST00000411971 GIGYF1O75420 1035 aaPredicted RBP22.36■■□□□ 1.17
SCAMP4-203ENST00000411971 AFDNP55196 1824 aaKnown RBP22.36■■□□□ 1.17
SCAMP4-203ENST00000411971 SENP3-EIF4A1A0A087X0R7 540 aa22.34■■□□□ 1.17
SCAMP4-203ENST00000411971 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
SCAMP4-203ENST00000411971 DPEP1P16444 411 aa22.34■■□□□ 1.17
SCAMP4-203ENST00000411971 KCNA3P22001 575 aa22.34■■□□□ 1.17
SCAMP4-203ENST00000411971 ARFGEF1Q9Y6D6 1849 aa22.33■■□□□ 1.16
SCAMP4-203ENST00000411971 SOS1Q07889 1333 aaPredicted RBP22.32■■□□□ 1.16
SCAMP4-203ENST00000411971 IL17REQ8NFR9 667 aa22.32■■□□□ 1.16
SCAMP4-203ENST00000411971 ZNF526Q8TF50 670 aaPredicted RBP22.32■■□□□ 1.16
SCAMP4-203ENST00000411971 CCDC87Q9NVE4 849 aa22.32■■□□□ 1.16
SCAMP4-203ENST00000411971 CEP350Q5VT06 3117 aa22.32■■□□□ 1.16
SCAMP4-203ENST00000411971 U2SURPO15042 1029 aaKnown RBP22.31■■□□□ 1.16
SCAMP4-203ENST00000411971 TGFB2P61812 414 aa22.31■■□□□ 1.16
SCAMP4-203ENST00000411971 ZBTB1Q9Y2K1 713 aa22.31■■□□□ 1.16
SCAMP4-203ENST00000411971 PARP3Q9Y6F1 533 aa22.31■■□□□ 1.16
SCAMP4-203ENST00000411971 BCL2L12Q9HB09 334 aa22.3■■□□□ 1.16
SCAMP4-203ENST00000411971 BCS1LQ9Y276 419 aa22.3■■□□□ 1.16
SCAMP4-203ENST00000411971 NRXN2Q9P2S2 1712 aa22.29■■□□□ 1.16
SCAMP4-203ENST00000411971 TM4SF1P30408 202 aa22.29■■□□□ 1.16
SCAMP4-203ENST00000411971 USPL1Q5W0Q7 1092 aa22.29■■□□□ 1.16
SCAMP4-203ENST00000411971 PHACTR3Q96KR7 559 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms