RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 EDC4Q6P2E9 1401 aaKnown RBP9.82□□□□□ -0.84
LSM8-202ENST00000411938 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
LSM8-202ENST00000411938 COG3Q96JB2 828 aa9.81□□□□□ -0.84
LSM8-202ENST00000411938 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
LSM8-202ENST00000411938 MKRN1Q9UHC7 482 aaKnown RBP9.81□□□□□ -0.84
LSM8-202ENST00000411938 PARP3Q9Y6F1 533 aa9.81□□□□□ -0.84
LSM8-202ENST00000411938 RGPD2P0DJD1 1756 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 CD163L1Q9NR16 1453 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 KIF13BQ9NQT8 1826 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 KIAA1551Q9HCM1 1747 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 FOXN1O15353 648 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 CYP27B1O15528 508 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 KCNA3P22001 575 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 ITPK1Q13572 414 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 PRDM10Q9NQV6 1147 aa9.8□□□□□ -0.84
LSM8-202ENST00000411938 RTCBQ9Y3I0 505 aaKnown RBP9.8□□□□□ -0.84
LSM8-202ENST00000411938 TNRC6CQ9HCJ0 1690 aaKnown RBP9.8□□□□□ -0.84
LSM8-202ENST00000411938 PKD1L3Q7Z443 1732 aa9.79□□□□□ -0.84
LSM8-202ENST00000411938 ROCK2O75116 1388 aaKnown RBP9.79□□□□□ -0.84
LSM8-202ENST00000411938 AIDAQ96BJ3 306 aa9.79□□□□□ -0.84
LSM8-202ENST00000411938 GLTPD2A6NH11 291 aa9.78□□□□□ -0.84
LSM8-202ENST00000411938 RFC4P35249 363 aa9.78□□□□□ -0.84
LSM8-202ENST00000411938 CTCFP49711 727 aaPredicted RBP9.78□□□□□ -0.84
LSM8-202ENST00000411938 RRS1Q15050 365 aaKnown RBP9.78□□□□□ -0.84
LSM8-202ENST00000411938 TMOD3Q9NYL9 352 aa9.78□□□□□ -0.84
LSM8-202ENST00000411938 ASAP1Q9ULH1 1129 aa9.78□□□□□ -0.84
LSM8-202ENST00000411938 SMG6Q86US8 1419 aaKnown RBP9.78□□□□□ -0.84
LSM8-202ENST00000411938 A0A1W2PP64 1363 aa9.77□□□□□ -0.84
LSM8-202ENST00000411938 GYS1P13807 737 aa9.77□□□□□ -0.85
LSM8-202ENST00000411938 CHRNA5P30532 468 aa9.77□□□□□ -0.85
LSM8-202ENST00000411938 RASSF7Q02833 373 aa9.77□□□□□ -0.85
LSM8-202ENST00000411938 ARHGEF1Q92888 912 aaKnown RBP9.77□□□□□ -0.85
LSM8-202ENST00000411938 L3MBTL2Q969R5 705 aa9.77□□□□□ -0.85
LSM8-202ENST00000411938 CREBZFQ9NS37 354 aa9.77□□□□□ -0.85
LSM8-202ENST00000411938 ZC3H4Q9UPT8 1303 aaKnown RBP9.77□□□□□ -0.85
LSM8-202ENST00000411938 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.85
LSM8-202ENST00000411938 ADRA2BP18089 450 aa9.76□□□□□ -0.85
LSM8-202ENST00000411938 ABHD8Q96I13 439 aa9.76□□□□□ -0.85
LSM8-202ENST00000411938 ITGB4P16144 1822 aa9.76□□□□□ -0.85
LSM8-202ENST00000411938 BRCA1P38398 1863 aaKnown RBP9.76□□□□□ -0.85
LSM8-202ENST00000411938 C4AP0C0L4 1744 aa9.76□□□□□ -0.85
LSM8-202ENST00000411938 RTL1A6NKG5 1358 aa9.75□□□□□ -0.85
LSM8-202ENST00000411938 LMNB1P20700 586 aa9.75□□□□□ -0.85
LSM8-202ENST00000411938 LBX1P52954 281 aa9.75□□□□□ -0.85
LSM8-202ENST00000411938 MLLT1Q03111 559 aaPredicted RBP9.75□□□□□ -0.85
LSM8-202ENST00000411938 MAP2P11137 1827 aaKnown RBP9.75□□□□□ -0.85
LSM8-202ENST00000411938 NKX1-1Q15270 411 aaPredicted RBP9.74□□□□□ -0.85
LSM8-202ENST00000411938 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
LSM8-202ENST00000411938 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
LSM8-202ENST00000411938 ATG3Q9NT62 314 aa9.74□□□□□ -0.85
LSM8-202ENST00000411938 SPG7Q9UQ90 795 aa9.74□□□□□ -0.85
LSM8-202ENST00000411938 SBF1O95248 1867 aa9.74□□□□□ -0.85
LSM8-202ENST00000411938 CCDC85CA6NKD9 419 aa9.73□□□□□ -0.85
LSM8-202ENST00000411938 RPS6KA4O75676 772 aa9.73□□□□□ -0.85
LSM8-202ENST00000411938 RC3H1Q5TC82 1133 aaKnown RBP9.73□□□□□ -0.85
LSM8-202ENST00000411938 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
LSM8-202ENST00000411938 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
LSM8-202ENST00000411938 PDE4DIPQ5VU43 2346 aa9.73□□□□□ -0.85
LSM8-202ENST00000411938 POTECB2RU33 542 aa9.72□□□□□ -0.85
LSM8-202ENST00000411938 DDR1Q08345 913 aa9.72□□□□□ -0.85
LSM8-202ENST00000411938 FKBP8Q14318 412 aa9.72□□□□□ -0.85
LSM8-202ENST00000411938 SRP68Q9UHB9 627 aaKnown RBP9.72□□□□□ -0.85
LSM8-202ENST00000411938 INSRP06213 1382 aa9.72□□□□□ -0.85
LSM8-202ENST00000411938 CNTNAP1P78357 1384 aa9.72□□□□□ -0.85
LSM8-202ENST00000411938 VEGFBP49765 207 aa9.71□□□□□ -0.86
LSM8-202ENST00000411938 SLC4A9Q96Q91 983 aa9.71□□□□□ -0.86
LSM8-202ENST00000411938 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
LSM8-202ENST00000411938 WBP1LQ9NX94 342 aa9.71□□□□□ -0.86
LSM8-202ENST00000411938 CNTNAP4Q9C0A0 1308 aa9.71□□□□□ -0.86
LSM8-202ENST00000411938 KDM6AO15550 1401 aaPredicted RBP9.71□□□□□ -0.86
LSM8-202ENST00000411938 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
LSM8-202ENST00000411938 CARD11Q9BXL7 1154 aa9.7□□□□□ -0.86
LSM8-202ENST00000411938 HSPA8P11142 646 aaKnown RBP9.69□□□□□ -0.86
LSM8-202ENST00000411938 PHKG2P15735 406 aa9.69□□□□□ -0.86
LSM8-202ENST00000411938 FLT4P35916 1363 aa9.69□□□□□ -0.86
LSM8-202ENST00000411938 KDRP35968 1356 aa9.69□□□□□ -0.86
LSM8-202ENST00000411938 IFNL2Q8IZJ0 200 aa9.69□□□□□ -0.86
LSM8-202ENST00000411938 TTLL6Q8N841 843 aa9.69□□□□□ -0.86
LSM8-202ENST00000411938 PUS7Q96PZ0 661 aaKnown RBP9.69□□□□□ -0.86
LSM8-202ENST00000411938 USP42Q9H9J4 1324 aaKnown RBP9.68□□□□□ -0.86
LSM8-202ENST00000411938 NFKBIEO00221 500 aa9.68□□□□□ -0.86
LSM8-202ENST00000411938 POLRMTO00411 1230 aaKnown RBP9.68□□□□□ -0.86
LSM8-202ENST00000411938 FYB1O15117 783 aa9.68□□□□□ -0.86
LSM8-202ENST00000411938 POTEIP0CG38 1075 aa9.68□□□□□ -0.86
LSM8-202ENST00000411938 POTEJP0CG39 1038 aa9.68□□□□□ -0.86
LSM8-202ENST00000411938 RGS19P49795 217 aa9.68□□□□□ -0.86
LSM8-202ENST00000411938 ERFEQ4G0M1 354 aa9.68□□□□□ -0.86
LSM8-202ENST00000411938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.68□□□□□ -0.864e-7■□□□□ 9.1
LSM8-202ENST00000411938 TMEM88BA6NKF7 163 aa9.67□□□□□ -0.86
LSM8-202ENST00000411938 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
LSM8-202ENST00000411938 CRKLP46109 303 aaKnown RBP9.67□□□□□ -0.86
LSM8-202ENST00000411938 NEUROD1Q13562 356 aa9.67□□□□□ -0.86
LSM8-202ENST00000411938 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
LSM8-202ENST00000411938 PTCD1O75127 700 aaKnown RBP9.66□□□□□ -0.86
LSM8-202ENST00000411938 ZPR1O75312 459 aa9.66□□□□□ -0.86
LSM8-202ENST00000411938 TM4SF1P30408 202 aa9.66□□□□□ -0.86
LSM8-202ENST00000411938 MAP2K1Q02750 393 aaPredicted RBP9.66□□□□□ -0.86
LSM8-202ENST00000411938 C2CD5Q86YS7 1000 aa9.66□□□□□ -0.86
LSM8-202ENST00000411938 SIN3AQ96ST3 1273 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms