RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 TULP4Q9NRJ4 1543 aa9.51□□□□□ -0.89
LINC00396-201ENST00000411690 AATKQ6ZMQ8 1374 aa9.51□□□□□ -0.89
LINC00396-201ENST00000411690 BCL9O00512 1426 aa9.51□□□□□ -0.89
LINC00396-201ENST00000411690 SPATA31E1Q6ZUB1 1445 aa9.51□□□□□ -0.89
LINC00396-201ENST00000411690 DNAJC5GQ8N7S2 189 aa9.51□□□□□ -0.89
LINC00396-201ENST00000411690 ABTB2Q8N961 1025 aa9.51□□□□□ -0.89
LINC00396-201ENST00000411690 LRRC37A3O60309 1634 aa9.51□□□□□ -0.89
LINC00396-201ENST00000411690 PPP1R37O75864 691 aa9.5□□□□□ -0.89
LINC00396-201ENST00000411690 TOM1L2Q6ZVM7 507 aa9.5□□□□□ -0.89
LINC00396-201ENST00000411690 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
LINC00396-201ENST00000411690 ZBTB7CA1YPR0 619 aa9.49□□□□□ -0.89
LINC00396-201ENST00000411690 GCP02774 474 aa9.49□□□□□ -0.89
LINC00396-201ENST00000411690 ZNF827Q17R98 1081 aa9.49□□□□□ -0.89
LINC00396-201ENST00000411690 CDCA7Q9BWT1 371 aaPredicted RBP9.49□□□□□ -0.89
LINC00396-201ENST00000411690 TRAK1Q9UPV9 953 aa9.49□□□□□ -0.89
LINC00396-201ENST00000411690 EXOC5O00471 708 aa9.48□□□□□ -0.89
LINC00396-201ENST00000411690 NLRP13Q86W25 1043 aa9.48□□□□□ -0.89
LINC00396-201ENST00000411690 NUDT16Q96DE0 195 aaKnown RBP9.48□□□□□ -0.89
LINC00396-201ENST00000411690 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
LINC00396-201ENST00000411690 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
LINC00396-201ENST00000411690 USP19O94966 1318 aa9.47□□□□□ -0.89
LINC00396-201ENST00000411690 ADCY9O60503 1353 aa9.47□□□□□ -0.89
LINC00396-201ENST00000411690 AKAP12Q02952 1782 aa9.47□□□□□ -0.89
LINC00396-201ENST00000411690 TOPAZ1Q8N9V7 1692 aa9.46□□□□□ -0.89
LINC00396-201ENST00000411690 ACSBG1Q96GR2 724 aa9.46□□□□□ -0.9
LINC00396-201ENST00000411690 ACEP12821 1306 aa9.46□□□□□ -0.9
LINC00396-201ENST00000411690 PAPPAQ13219 1627 aa9.45□□□□□ -0.9
LINC00396-201ENST00000411690 LRRC4BQ9NT99 713 aa9.45□□□□□ -0.9
LINC00396-201ENST00000411690 POLR3AO14802 1390 aaPredicted RBP9.45□□□□□ -0.9
LINC00396-201ENST00000411690 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
LINC00396-201ENST00000411690 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
LINC00396-201ENST00000411690 PNPLA7Q6ZV29 1317 aa9.44□□□□□ -0.9
LINC00396-201ENST00000411690 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
LINC00396-201ENST00000411690 BRD4O60885 1362 aaPredicted RBP9.43□□□□□ -0.9
LINC00396-201ENST00000411690 TOMM70O94826 608 aa9.43□□□□□ -0.9
LINC00396-201ENST00000411690 PTPN5P54829 565 aa9.43□□□□□ -0.9
LINC00396-201ENST00000411690 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
LINC00396-201ENST00000411690 JMYQ8N9B5 988 aa9.43□□□□□ -0.9
LINC00396-201ENST00000411690 KLRG1Q96E93 195 aa9.43□□□□□ -0.9
LINC00396-201ENST00000411690 TFCP2L1Q9NZI6 479 aa9.43□□□□□ -0.9
LINC00396-201ENST00000411690 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
LINC00396-201ENST00000411690 CSB-PGBD3P0DP91 1061 aa9.42□□□□□ -0.9
LINC00396-201ENST00000411690 CARD10Q9BWT7 1032 aa9.42□□□□□ -0.9
LINC00396-201ENST00000411690 CDK19Q9BWU1 502 aa9.42□□□□□ -0.9
LINC00396-201ENST00000411690 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
LINC00396-201ENST00000411690 USP6P35125 1406 aa9.41□□□□□ -0.9
LINC00396-201ENST00000411690 WNK3Q9BYP7 1800 aa9.41□□□□□ -0.9
LINC00396-201ENST00000411690 PLEKHG3A1L390 1219 aa9.41□□□□□ -0.9
LINC00396-201ENST00000411690 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
LINC00396-201ENST00000411690 PLPP6Q8IY26 295 aa9.41□□□□□ -0.9
LINC00396-201ENST00000411690 FOXK1P85037 733 aa9.4□□□□□ -0.9
LINC00396-201ENST00000411690 WWC3Q9ULE0 1092 aa9.4□□□□□ -0.9
LINC00396-201ENST00000411690 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
LINC00396-201ENST00000411690 CD2APQ9Y5K6 639 aa9.4□□□□□ -0.9
LINC00396-201ENST00000411690 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
LINC00396-201ENST00000411690 QSER1Q2KHR3 1735 aa9.39□□□□□ -0.91
LINC00396-201ENST00000411690 RGL2O15211 777 aa9.39□□□□□ -0.91
LINC00396-201ENST00000411690 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
LINC00396-201ENST00000411690 HTRA3P83110 453 aa9.39□□□□□ -0.91
LINC00396-201ENST00000411690 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
LINC00396-201ENST00000411690 CCDC7Q96M83 1385 aa9.38□□□□□ -0.91
LINC00396-201ENST00000411690 STAC3Q96MF2 364 aa9.38□□□□□ -0.91
LINC00396-201ENST00000411690 MPHOSPH9Q99550 1183 aa9.38□□□□□ -0.91
LINC00396-201ENST00000411690 WDR90Q96KV7 1748 aa9.38□□□□□ -0.91
LINC00396-201ENST00000411690 BTAF1O14981 1849 aa9.38□□□□□ -0.91
LINC00396-201ENST00000411690 GOLGB1Q14789 3259 aaKnown RBP9.37□□□□□ -0.91
LINC00396-201ENST00000411690 KCNQ4P56696 695 aa9.37□□□□□ -0.91
LINC00396-201ENST00000411690 DSG2Q14126 1118 aa9.37□□□□□ -0.91
LINC00396-201ENST00000411690 MSL1Q68DK7 614 aa9.37□□□□□ -0.91
LINC00396-201ENST00000411690 COL23A1Q86Y22 540 aaPredicted RBP9.37□□□□□ -0.91
LINC00396-201ENST00000411690 PPARGC1BQ86YN6 1023 aaKnown RBP9.37□□□□□ -0.91
LINC00396-201ENST00000411690 COL18A1P39060 1754 aa9.37□□□□□ -0.91
LINC00396-201ENST00000411690 ARHGEF28Q8N1W1 1705 aaKnown RBP9.36□□□□□ -0.91
LINC00396-201ENST00000411690 ARHGEF25Q86VW2 580 aa9.36□□□□□ -0.91
LINC00396-201ENST00000411690 IRX2Q9BZI1 471 aaPredicted RBP9.36□□□□□ -0.91
LINC00396-201ENST00000411690 SLIT3O75094 1523 aa9.36□□□□□ -0.91
LINC00396-201ENST00000411690 CPSF1Q10570 1443 aaKnown RBP9.35□□□□□ -0.91
LINC00396-201ENST00000411690 PPIP5K1Q6PFW1 1433 aa9.35□□□□□ -0.91
LINC00396-201ENST00000411690 C16orf71Q8IYS4 520 aaPredicted RBP9.35□□□□□ -0.91
LINC00396-201ENST00000411690 RBM46Q8TBY0 533 aaKnown RBP9.35□□□□□ -0.91
LINC00396-201ENST00000411690 GPHNQ9NQX3 736 aaPredicted RBP9.35□□□□□ -0.91
LINC00396-201ENST00000411690 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 TUBGCP6Q96RT7 1819 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 IL2RBP14784 551 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 THSD4Q6ZMP0 1018 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 KCNH5Q8NCM2 988 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 NMRK2Q9NPI5 230 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 ABCC6O95255 1503 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 TRPM1Q7Z4N2 1603 aa9.34□□□□□ -0.91
LINC00396-201ENST00000411690 HSPA1AP0DMV8 641 aaKnown RBP9.33□□□□□ -0.92
LINC00396-201ENST00000411690 HSPA1BP0DMV9 641 aaKnown RBP9.33□□□□□ -0.92
LINC00396-201ENST00000411690 FSTL1Q12841 308 aa9.33□□□□□ -0.92
LINC00396-201ENST00000411690 SYTL4Q96C24 671 aaPredicted RBP9.33□□□□□ -0.92
LINC00396-201ENST00000411690 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
LINC00396-201ENST00000411690 KAT6BQ8WYB5 2073 aa9.32□□□□□ -0.92
LINC00396-201ENST00000411690 RGS20O76081 388 aa9.32□□□□□ -0.92
LINC00396-201ENST00000411690 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
LINC00396-201ENST00000411690 NLRP2Q9NX02 1062 aa9.32□□□□□ -0.92
LINC00396-201ENST00000411690 CCNL1Q9UK58 526 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms