RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 PLEKHO1Q53GL0 409 aaPredicted RBP11.61□□□□□ -0.55
LINC02539-201ENST00000411615 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
LINC02539-201ENST00000411615 NGEFQ8N5V2 710 aa11.61□□□□□ -0.55
LINC02539-201ENST00000411615 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
LINC02539-201ENST00000411615 USP35Q9P2H5 1018 aa11.61□□□□□ -0.55
LINC02539-201ENST00000411615 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
LINC02539-201ENST00000411615 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
LINC02539-201ENST00000411615 MEGF6O75095 1541 aa11.6□□□□□ -0.55
LINC02539-201ENST00000411615 THSD7AQ9UPZ6 1657 aa11.59□□□□□ -0.55
LINC02539-201ENST00000411615 EXOC5O00471 708 aa11.59□□□□□ -0.55
LINC02539-201ENST00000411615 RXRBP28702 533 aa11.59□□□□□ -0.55
LINC02539-201ENST00000411615 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
LINC02539-201ENST00000411615 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
LINC02539-201ENST00000411615 FAM98CQ17RN3 349 aaKnown RBP11.58□□□□□ -0.56
LINC02539-201ENST00000411615 ZCRB1Q8TBF4 217 aaKnown RBP11.58□□□□□ -0.56
LINC02539-201ENST00000411615 PHACTR3Q96KR7 559 aa11.58□□□□□ -0.56
LINC02539-201ENST00000411615 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
LINC02539-201ENST00000411615 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
LINC02539-201ENST00000411615 TIE1P35590 1138 aa11.57□□□□□ -0.56
LINC02539-201ENST00000411615 NFE2L2Q16236 605 aa11.57□□□□□ -0.56
LINC02539-201ENST00000411615 DDB1Q16531 1140 aa11.57□□□□□ -0.56
LINC02539-201ENST00000411615 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
LINC02539-201ENST00000411615 POTEAQ6S8J7 498 aa11.57□□□□□ -0.56
LINC02539-201ENST00000411615 TNS2Q63HR2 1409 aa11.57□□□□□ -0.56
LINC02539-201ENST00000411615 PCDH11XQ9BZA7 1347 aa11.57□□□□□ -0.56
LINC02539-201ENST00000411615 PCDH11YQ9BZA8 1340 aa11.57□□□□□ -0.56
LINC02539-201ENST00000411615 HSP90AB1P08238 724 aaKnown RBP11.56□□□□□ -0.56
LINC02539-201ENST00000411615 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
LINC02539-201ENST00000411615 NKX1-1Q15270 411 aaPredicted RBP11.56□□□□□ -0.56
LINC02539-201ENST00000411615 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
LINC02539-201ENST00000411615 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
LINC02539-201ENST00000411615 TRIM35Q9UPQ4 493 aa11.56□□□□□ -0.56
LINC02539-201ENST00000411615 LRRC37A3O60309 1634 aa11.56□□□□□ -0.56
LINC02539-201ENST00000411615 SHANK3Q9BYB0 1731 aa11.55□□□□□ -0.56
LINC02539-201ENST00000411615 APAF1O14727 1248 aa11.55□□□□□ -0.56
LINC02539-201ENST00000411615 CCDC27Q2M243 656 aa11.55□□□□□ -0.56
LINC02539-201ENST00000411615 CCDC146Q8IYE0 955 aa11.55□□□□□ -0.56
LINC02539-201ENST00000411615 SEPT12Q8IYM1 358 aa11.55□□□□□ -0.56
LINC02539-201ENST00000411615 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
LINC02539-201ENST00000411615 BCL9O00512 1426 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 CYP27B1O15528 508 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 PHKG2P15735 406 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 ZNF530Q6P9A1 599 aaPredicted RBP11.54□□□□□ -0.56
LINC02539-201ENST00000411615 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 DLG5Q8TDM6 1919 aa11.54□□□□□ -0.56
LINC02539-201ENST00000411615 C7P10643 843 aa11.53□□□□□ -0.56
LINC02539-201ENST00000411615 RIPK4P57078 832 aa11.53□□□□□ -0.56
LINC02539-201ENST00000411615 PDE3BQ13370 1112 aa11.53□□□□□ -0.56
LINC02539-201ENST00000411615 MAP3K5Q99683 1374 aa11.53□□□□□ -0.56
LINC02539-201ENST00000411615 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.56
LINC02539-201ENST00000411615 DCAF5Q96JK2 942 aa11.52□□□□□ -0.57
LINC02539-201ENST00000411615 A0A0G2JS52 829 aa11.51□□□□□ -0.57
LINC02539-201ENST00000411615 MYT1Q01538 1121 aa11.51□□□□□ -0.57
LINC02539-201ENST00000411615 MARCH10Q8NA82 808 aaPredicted RBP11.51□□□□□ -0.57
LINC02539-201ENST00000411615 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
LINC02539-201ENST00000411615 RTF1Q92541 710 aaKnown RBP11.51□□□□□ -0.57
LINC02539-201ENST00000411615 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
LINC02539-201ENST00000411615 CEMIPQ8WUJ3 1361 aa11.51□□□□□ -0.57
LINC02539-201ENST00000411615 SCN11AQ9UI33 1791 aa11.51□□□□□ -0.57
LINC02539-201ENST00000411615 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
LINC02539-201ENST00000411615 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
LINC02539-201ENST00000411615 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
LINC02539-201ENST00000411615 KRT27Q7Z3Y8 459 aa11.5□□□□□ -0.57
LINC02539-201ENST00000411615 VIRMAQ69YN4 1812 aaKnown RBP11.5□□□□□ -0.57
LINC02539-201ENST00000411615 RGS12O14924 1447 aa11.5□□□□□ -0.57
LINC02539-201ENST00000411615 RNMTO43148 476 aaKnown RBP11.49□□□□□ -0.57
LINC02539-201ENST00000411615 WDR63Q8IWG1 891 aa11.49□□□□□ -0.57
LINC02539-201ENST00000411615 WWC1Q8IX03 1113 aa11.49□□□□□ -0.57
LINC02539-201ENST00000411615 IL17REQ8NFR9 667 aa11.49□□□□□ -0.57
LINC02539-201ENST00000411615 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
LINC02539-201ENST00000411615 BABAM1Q9NWV8 329 aa11.49□□□□□ -0.57
LINC02539-201ENST00000411615 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
LINC02539-201ENST00000411615 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
LINC02539-201ENST00000411615 FAM196AQ6ZSG2 479 aa11.48□□□□□ -0.57
LINC02539-201ENST00000411615 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
LINC02539-201ENST00000411615 IL16Q14005 1332 aa11.48□□□□□ -0.57
LINC02539-201ENST00000411615 ZNF521Q96K83 1311 aa11.48□□□□□ -0.57
LINC02539-201ENST00000411615 KDM6AO15550 1401 aaPredicted RBP11.48□□□□□ -0.57
LINC02539-201ENST00000411615 MRC1P22897 1456 aa11.47□□□□□ -0.57
LINC02539-201ENST00000411615 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC02539-201ENST00000411615 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
LINC02539-201ENST00000411615 LGR6Q9HBX8 967 aa11.47□□□□□ -0.57
LINC02539-201ENST00000411615 ZBED9Q6R2W3 1325 aa11.46□□□□□ -0.57
LINC02539-201ENST00000411615 TAF7Q15545 349 aaPredicted RBP11.46□□□□□ -0.57
LINC02539-201ENST00000411615 ITGB4P16144 1822 aa11.46□□□□□ -0.58
LINC02539-201ENST00000411615 SBF2Q86WG5 1849 aa11.46□□□□□ -0.58
LINC02539-201ENST00000411615 SIPA1L3O60292 1781 aaPredicted RBP11.46□□□□□ -0.58
LINC02539-201ENST00000411615 CABP4P57796 275 aa11.45□□□□□ -0.58
LINC02539-201ENST00000411615 TEFQ10587 303 aa11.45□□□□□ -0.58
LINC02539-201ENST00000411615 MCM10Q7L590 875 aa11.45□□□□□ -0.58
LINC02539-201ENST00000411615 SLC52A2Q9HAB3 445 aa11.45□□□□□ -0.58
LINC02539-201ENST00000411615 TOGARAM1Q9Y4F4 1720 aa11.44□□□□□ -0.58
LINC02539-201ENST00000411615 ZNF853P0CG23 659 aa11.44□□□□□ -0.58
LINC02539-201ENST00000411615 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
LINC02539-201ENST00000411615 GSE1Q14687 1217 aa11.44□□□□□ -0.58
LINC02539-201ENST00000411615 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
LINC02539-201ENST00000411615 IFT57Q9NWB7 429 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms