RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 AMOTQ4VCS5 1084 aa24.76■■□□□ 1.55
LIMS2-207ENST00000409808 C22orf23Q9BZE7 217 aa24.76■■□□□ 1.55
LIMS2-207ENST00000409808 FAM208AQ9UK61 1670 aaKnown RBP24.76■■□□□ 1.55
LIMS2-207ENST00000409808 TAF7Q15545 349 aaPredicted RBP24.75■■□□□ 1.55
LIMS2-207ENST00000409808 AKAP4Q5JQC9 854 aa24.75■■□□□ 1.55
LIMS2-207ENST00000409808 SLKQ9H2G2 1235 aaPredicted RBP24.74■■□□□ 1.55
LIMS2-207ENST00000409808 CEMIPQ8WUJ3 1361 aa24.74■■□□□ 1.55
LIMS2-207ENST00000409808 RAPGEF4Q8WZA2 1011 aa24.74■■□□□ 1.55
LIMS2-207ENST00000409808 ARHGAP45Q92619 1136 aa24.73■■□□□ 1.55
LIMS2-207ENST00000409808 C1orf141Q5JVX7 400 aa24.73■■□□□ 1.55
LIMS2-207ENST00000409808 BRPF3Q9ULD4 1205 aa24.73■■□□□ 1.55
LIMS2-207ENST00000409808 MEGF6O75095 1541 aa24.72■■□□□ 1.55
LIMS2-207ENST00000409808 ABCC6O95255 1503 aa24.72■■□□□ 1.55
LIMS2-207ENST00000409808 NUCB1Q02818 461 aa24.72■■□□□ 1.55
LIMS2-207ENST00000409808 TATP17735 454 aaPredicted RBP24.7■■□□□ 1.54
LIMS2-207ENST00000409808 RNMTO43148 476 aaKnown RBP24.69■■□□□ 1.54
LIMS2-207ENST00000409808 KCNQ3O43525 872 aa24.67■■□□□ 1.54
LIMS2-207ENST00000409808 MFAP1P55081 439 aaKnown RBP24.67■■□□□ 1.54
LIMS2-207ENST00000409808 TEFQ10587 303 aa24.67■■□□□ 1.54
LIMS2-207ENST00000409808 TOM1L2Q6ZVM7 507 aa24.67■■□□□ 1.54
LIMS2-207ENST00000409808 NECTIN2Q92692 538 aa24.67■■□□□ 1.54
LIMS2-207ENST00000409808 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
LIMS2-207ENST00000409808 WDR17Q8IZU2 1322 aa24.66■■□□□ 1.54
LIMS2-207ENST00000409808 COL5A2P05997 1499 aaPredicted RBP24.66■■□□□ 1.54
LIMS2-207ENST00000409808 L1TD1Q5T7N2 865 aaKnown RBP24.66■■□□□ 1.54
LIMS2-207ENST00000409808 GCC1Q96CN9 775 aa24.66■■□□□ 1.54
LIMS2-207ENST00000409808 CHMP5Q9NZZ3 219 aa24.66■■□□□ 1.54
LIMS2-207ENST00000409808 SLC4A2P04920 1241 aa24.64■■□□□ 1.54
LIMS2-207ENST00000409808 CHD1LQ86WJ1 897 aa24.64■■□□□ 1.54
LIMS2-207ENST00000409808 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.54
LIMS2-207ENST00000409808 RBM25P49756 843 aaKnown RBP24.64■■□□□ 1.53
LIMS2-207ENST00000409808 PIP4K2BP78356 416 aa24.64■■□□□ 1.53
LIMS2-207ENST00000409808 BABAM1Q9NWV8 329 aa24.64■■□□□ 1.53
LIMS2-207ENST00000409808 SPG7Q9UQ90 795 aa24.63■■□□□ 1.53
LIMS2-207ENST00000409808 BTBD11A6QL63 1104 aa24.63■■□□□ 1.53
LIMS2-207ENST00000409808 LARP1Q6PKG0 1096 aaKnown RBP24.63■■□□□ 1.53
LIMS2-207ENST00000409808 ZBTB7BO15156 539 aaPredicted RBP24.62■■□□□ 1.53
LIMS2-207ENST00000409808 G2E3Q7L622 706 aa24.62■■□□□ 1.53
LIMS2-207ENST00000409808 PHKG2P15735 406 aa24.62■■□□□ 1.53
LIMS2-207ENST00000409808 EVA1CP58658 441 aa24.62■■□□□ 1.53
LIMS2-207ENST00000409808 HSCBQ8IWL3 235 aa24.62■■□□□ 1.53
LIMS2-207ENST00000409808 RTN4Q9NQC3 1192 aaKnown RBP24.62■■□□□ 1.53
LIMS2-207ENST00000409808 KDM3BQ7LBC6 1761 aa24.62■■□□□ 1.53
LIMS2-207ENST00000409808 ABCC4O15439 1325 aa24.61■■□□□ 1.53
LIMS2-207ENST00000409808 BMP2KLQ5H9B9 411 aa24.61■■□□□ 1.53
LIMS2-207ENST00000409808 SNX21Q969T3 373 aa24.61■■□□□ 1.53
LIMS2-207ENST00000409808 CYP27B1O15528 508 aa24.61■■□□□ 1.53
LIMS2-207ENST00000409808 EIF4A1P60842 406 aaKnown RBP24.61■■□□□ 1.53
LIMS2-207ENST00000409808 API5Q9BZZ5 524 aaKnown RBP24.6■■□□□ 1.53
LIMS2-207ENST00000409808 MCM4P33991 863 aa24.59■■□□□ 1.53
LIMS2-207ENST00000409808 BTG4Q9NY30 223 aa24.59■■□□□ 1.53
LIMS2-207ENST00000409808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.59■■□□□ 1.53
LIMS2-207ENST00000409808 KDM6AO15550 1401 aaPredicted RBP24.59■■□□□ 1.53
LIMS2-207ENST00000409808 EIF5BO60841 1220 aaKnown RBP24.58■■□□□ 1.53
LIMS2-207ENST00000409808 IFNL2Q8IZJ0 200 aa24.58■■□□□ 1.53
LIMS2-207ENST00000409808 RGS12O14924 1447 aa24.58■■□□□ 1.52
LIMS2-207ENST00000409808 PHLPP1O60346 1717 aa24.58■■□□□ 1.52
LIMS2-207ENST00000409808 SIPA1L3O60292 1781 aaPredicted RBP24.57■■□□□ 1.52
LIMS2-207ENST00000409808 PKD1L3Q7Z443 1732 aa24.57■■□□□ 1.52
LIMS2-207ENST00000409808 ADAMTS7Q9UKP4 1686 aa24.57■■□□□ 1.52
LIMS2-207ENST00000409808 SCN11AQ9UI33 1791 aa24.57■■□□□ 1.52
LIMS2-207ENST00000409808 LNPKQ9C0E8 428 aa24.57■■□□□ 1.52
LIMS2-207ENST00000409808 OVOS2A0A0G2JMS6 1433 aa24.56■■□□□ 1.52
LIMS2-207ENST00000409808 CCDC30Q5VVM6 783 aa24.56■■□□□ 1.52
LIMS2-207ENST00000409808 CARD10Q9BWT7 1032 aa24.56■■□□□ 1.52
LIMS2-207ENST00000409808 EIF2S2P20042 333 aaKnown RBP24.56■■□□□ 1.52
LIMS2-207ENST00000409808 FAM43AQ8N2R8 423 aa24.56■■□□□ 1.52
LIMS2-207ENST00000409808 STK31Q9BXU1 1019 aa24.56■■□□□ 1.52
LIMS2-207ENST00000409808 TOM1O60784 492 aa24.54■■□□□ 1.52
LIMS2-207ENST00000409808 HDGFL1Q5TGJ6 251 aa24.54■■□□□ 1.52
LIMS2-207ENST00000409808 NFATC2IPQ8NCF5 419 aa24.54■■□□□ 1.52
LIMS2-207ENST00000409808 C1orf115Q9H7X2 142 aa24.54■■□□□ 1.52
LIMS2-207ENST00000409808 F6X3S4 739 aa24.53■■□□□ 1.52
LIMS2-207ENST00000409808 SLC39A6Q13433 755 aa24.53■■□□□ 1.52
LIMS2-207ENST00000409808 COL16A1Q07092 1604 aaPredicted RBP24.53■■□□□ 1.52
LIMS2-207ENST00000409808 COL22A1Q8NFW1 1626 aaPredicted RBP24.53■■□□□ 1.52
LIMS2-207ENST00000409808 PTPRCP08575 1304 aa24.53■■□□□ 1.52
LIMS2-207ENST00000409808 SLC52A2Q9HAB3 445 aa24.53■■□□□ 1.52
LIMS2-207ENST00000409808 ANKRD45Q5TZF3 282 aa24.52■■□□□ 1.52
LIMS2-207ENST00000409808 PARP4Q9UKK3 1724 aaKnown RBP24.52■■□□□ 1.52
LIMS2-207ENST00000409808 ZCRB1Q8TBF4 217 aaKnown RBP24.52■■□□□ 1.52
LIMS2-207ENST00000409808 CIZ1Q9ULV3 898 aaPredicted RBP24.52■■□□□ 1.52
LIMS2-207ENST00000409808 PRAMEF22A3QJZ6 481 aa24.51■■□□□ 1.51
LIMS2-207ENST00000409808 IL2RBP14784 551 aa24.51■■□□□ 1.51
LIMS2-207ENST00000409808 UBAP1LF5GYI3 381 aa24.51■■□□□ 1.51
LIMS2-207ENST00000409808 ADAMTS2O95450 1211 aa24.51■■□□□ 1.51
LIMS2-207ENST00000409808 DDX11L8A8MPP1 907 aa24.5■■□□□ 1.51
LIMS2-207ENST00000409808 DCAF5Q96JK2 942 aa24.5■■□□□ 1.51
LIMS2-207ENST00000409808 DDIT3P35638 169 aa24.5■■□□□ 1.51
LIMS2-207ENST00000409808 FLIIQ13045 1269 aa24.5■■□□□ 1.51
LIMS2-207ENST00000409808 INTS3Q68E01 1043 aaKnown RBP24.5■■□□□ 1.51
LIMS2-207ENST00000409808 SPRYD3Q8NCJ5 442 aa24.5■■□□□ 1.51
LIMS2-207ENST00000409808 SOS1Q07889 1333 aaPredicted RBP24.5■■□□□ 1.51
LIMS2-207ENST00000409808 SLC4A10Q6U841 1118 aa24.49■■□□□ 1.51
LIMS2-207ENST00000409808 COL14A1Q05707 1796 aaKnown RBP24.49■■□□□ 1.51
LIMS2-207ENST00000409808 DDX54Q8TDD1 881 aaKnown RBP24.49■■□□□ 1.51
LIMS2-207ENST00000409808 PHAXQ9H814 394 aaKnown RBP24.49■■□□□ 1.51
LIMS2-207ENST00000409808 NUTM2BA6NNL0 878 aaPredicted RBP24.48■■□□□ 1.51
LIMS2-207ENST00000409808 NUTM2EB1AL46 878 aaPredicted RBP24.48■■□□□ 1.51
LIMS2-207ENST00000409808 NUTM2AQ8IVF1 878 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms