RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 OVOS2A0A0G2JMS6 1433 aa18.05■□□□□ 0.48
LIMS2-206ENST00000409754 COG6Q9Y2V7 657 aa18.05■□□□□ 0.48
LIMS2-206ENST00000409754 RLBP1P12271 317 aa18.04■□□□□ 0.48
LIMS2-206ENST00000409754 GNAT3A8MTJ3 354 aa18.03■□□□□ 0.48
LIMS2-206ENST00000409754 IPO8O15397 1037 aaKnown RBP18.03■□□□□ 0.48
LIMS2-206ENST00000409754 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
LIMS2-206ENST00000409754 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
LIMS2-206ENST00000409754 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
LIMS2-206ENST00000409754 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
LIMS2-206ENST00000409754 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
LIMS2-206ENST00000409754 FAM182BQ5T319 152 aa18.02■□□□□ 0.48
LIMS2-206ENST00000409754 ATF7IPQ6VMQ6 1270 aa18.02■□□□□ 0.48
LIMS2-206ENST00000409754 NOB1Q9ULX3 412 aaKnown RBP18.02■□□□□ 0.48
LIMS2-206ENST00000409754 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
LIMS2-206ENST00000409754 CENPQQ7L2Z9 268 aaPredicted RBP18.01■□□□□ 0.47
LIMS2-206ENST00000409754 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
LIMS2-206ENST00000409754 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
LIMS2-206ENST00000409754 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
LIMS2-206ENST00000409754 SBF2Q86WG5 1849 aa18.01■□□□□ 0.47
LIMS2-206ENST00000409754 TRIM27P14373 513 aa18.01■□□□□ 0.47
LIMS2-206ENST00000409754 IL2RBP14784 551 aa18.01■□□□□ 0.47
LIMS2-206ENST00000409754 MVPQ14764 893 aaKnown RBP18.01■□□□□ 0.47
LIMS2-206ENST00000409754 MRPL50Q8N5N7 158 aaKnown RBP18■□□□□ 0.47
LIMS2-206ENST00000409754 A0A0G2JS52 829 aa17.99■□□□□ 0.47
LIMS2-206ENST00000409754 MYT1Q01538 1121 aa17.99■□□□□ 0.47
LIMS2-206ENST00000409754 ARHGAP45Q92619 1136 aa17.99■□□□□ 0.47
LIMS2-206ENST00000409754 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
LIMS2-206ENST00000409754 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
LIMS2-206ENST00000409754 KRT27Q7Z3Y8 459 aa17.98■□□□□ 0.47
LIMS2-206ENST00000409754 MARCH10Q8NA82 808 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-206ENST00000409754 BABAM1Q9NWV8 329 aa17.98■□□□□ 0.47
LIMS2-206ENST00000409754 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-206ENST00000409754 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
LIMS2-206ENST00000409754 PLEKHO1Q53GL0 409 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-206ENST00000409754 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
LIMS2-206ENST00000409754 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
LIMS2-206ENST00000409754 DDB1Q16531 1140 aa17.96■□□□□ 0.47
LIMS2-206ENST00000409754 CDCA7Q9BWT1 371 aaPredicted RBP17.96■□□□□ 0.47
LIMS2-206ENST00000409754 CEMIPQ8WUJ3 1361 aa17.96■□□□□ 0.47
LIMS2-206ENST00000409754 DOT1LQ8TEK3 1739 aa17.95■□□□□ 0.46
LIMS2-206ENST00000409754 DDX19BQ9UMR2 479 aa17.95■□□□□ 0.46
LIMS2-206ENST00000409754 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
LIMS2-206ENST00000409754 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
LIMS2-206ENST00000409754 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-206ENST00000409754 BCL9O00512 1426 aa17.93■□□□□ 0.46
LIMS2-206ENST00000409754 CYP27B1O15528 508 aa17.93■□□□□ 0.46
LIMS2-206ENST00000409754 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
LIMS2-206ENST00000409754 TMEM57Q8N5G2 664 aa17.93■□□□□ 0.46
LIMS2-206ENST00000409754 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
LIMS2-206ENST00000409754 PLEKHG2Q9H7P9 1386 aa17.93■□□□□ 0.46
LIMS2-206ENST00000409754 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-206ENST00000409754 NHSQ6T4R5 1651 aa17.92■□□□□ 0.46
LIMS2-206ENST00000409754 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
LIMS2-206ENST00000409754 ITPRIPQ8IWB1 547 aa17.92■□□□□ 0.46
LIMS2-206ENST00000409754 RAPGEF4Q8WZA2 1011 aa17.92■□□□□ 0.46
LIMS2-206ENST00000409754 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
LIMS2-206ENST00000409754 PTF1AQ7RTS3 328 aa17.91■□□□□ 0.46
LIMS2-206ENST00000409754 API5Q9BZZ5 524 aaKnown RBP17.91■□□□□ 0.46
LIMS2-206ENST00000409754 EXOC5O00471 708 aa17.9■□□□□ 0.46
LIMS2-206ENST00000409754 TATP17735 454 aaPredicted RBP17.9■□□□□ 0.46
LIMS2-206ENST00000409754 ZCRB1Q8TBF4 217 aaKnown RBP17.9■□□□□ 0.46
LIMS2-206ENST00000409754 RBM19Q9Y4C8 960 aaKnown RBP17.9■□□□□ 0.46
LIMS2-206ENST00000409754 ABCC4O15439 1325 aa17.9■□□□□ 0.46
LIMS2-206ENST00000409754 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
LIMS2-206ENST00000409754 IGHDP01880 384 aa17.9■□□□□ 0.46
LIMS2-206ENST00000409754 C1orf141Q5JVX7 400 aa17.9■□□□□ 0.46
LIMS2-206ENST00000409754 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
LIMS2-206ENST00000409754 CHMP4BQ9H444 224 aaKnown RBP17.89■□□□□ 0.45
LIMS2-206ENST00000409754 UPF1Q92900 1129 aaKnown RBP eCLIP17.88■□□□□ 0.45
LIMS2-206ENST00000409754 ITGB4P16144 1822 aa17.88■□□□□ 0.45
LIMS2-206ENST00000409754 KDM6AO15550 1401 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-206ENST00000409754 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
LIMS2-206ENST00000409754 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
LIMS2-206ENST00000409754 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
LIMS2-206ENST00000409754 BTAF1O14981 1849 aa17.87■□□□□ 0.45
LIMS2-206ENST00000409754 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
LIMS2-206ENST00000409754 RWDD1Q9H446 243 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-206ENST00000409754 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
LIMS2-206ENST00000409754 PTPRCP08575 1304 aa17.86■□□□□ 0.45
LIMS2-206ENST00000409754 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
LIMS2-206ENST00000409754 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
LIMS2-206ENST00000409754 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
LIMS2-206ENST00000409754 SOCS7O14512 581 aa17.85■□□□□ 0.45
LIMS2-206ENST00000409754 KCNQ2O43526 872 aa17.84■□□□□ 0.45
LIMS2-206ENST00000409754 PHKG2P15735 406 aa17.84■□□□□ 0.45
LIMS2-206ENST00000409754 TEFQ10587 303 aa17.84■□□□□ 0.45
LIMS2-206ENST00000409754 MPRIPQ6WCQ1 1025 aa17.84■□□□□ 0.45
LIMS2-206ENST00000409754 FAM196AQ6ZSG2 479 aa17.84■□□□□ 0.45
LIMS2-206ENST00000409754 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
LIMS2-206ENST00000409754 HDAC1Q13547 482 aaPredicted RBP17.83■□□□□ 0.45
LIMS2-206ENST00000409754 NKX1-1Q15270 411 aaPredicted RBP17.83■□□□□ 0.45
LIMS2-206ENST00000409754 CCDC30Q5VVM6 783 aa17.83■□□□□ 0.45
LIMS2-206ENST00000409754 SPG7Q9UQ90 795 aa17.83■□□□□ 0.45
LIMS2-206ENST00000409754 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.44
LIMS2-206ENST00000409754 TRIM37O94972 964 aa17.83■□□□□ 0.44
LIMS2-206ENST00000409754 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
LIMS2-206ENST00000409754 KAT6BQ8WYB5 2073 aa17.82■□□□□ 0.44
LIMS2-206ENST00000409754 HOXB7P09629 217 aa17.82■□□□□ 0.44
LIMS2-206ENST00000409754 ACSBG1Q96GR2 724 aa17.82■□□□□ 0.44
LIMS2-206ENST00000409754 STK31Q9BXU1 1019 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms