RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 COG6Q9Y2V7 657 aa15.96■□□□□ 0.15
CHMP3-204ENST00000409727 RLBP1P12271 317 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 MRPL50Q8N5N7 158 aaKnown RBP15.95■□□□□ 0.14
CHMP3-204ENST00000409727 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 DCAF5Q96JK2 942 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 KIF16BQ96L93 1317 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 PDE3AQ14432 1141 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 FTSJ3Q8IY81 847 aaKnown RBP15.95■□□□□ 0.14
CHMP3-204ENST00000409727 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
CHMP3-204ENST00000409727 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
CHMP3-204ENST00000409727 TRIM27P14373 513 aa15.94■□□□□ 0.14
CHMP3-204ENST00000409727 NRAPQ86VF7 1730 aa15.94■□□□□ 0.14
CHMP3-204ENST00000409727 ATF7IPQ6VMQ6 1270 aa15.93■□□□□ 0.14
CHMP3-204ENST00000409727 SLC52A2Q9HAB3 445 aa15.93■□□□□ 0.14
CHMP3-204ENST00000409727 SCN11AQ9UI33 1791 aa15.93■□□□□ 0.14
CHMP3-204ENST00000409727 SPATA31A6Q5VVP1 1343 aa15.93■□□□□ 0.14
CHMP3-204ENST00000409727 LRP6O75581 1613 aa15.93■□□□□ 0.14
CHMP3-204ENST00000409727 IPO8O15397 1037 aaKnown RBP15.93■□□□□ 0.14
CHMP3-204ENST00000409727 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
CHMP3-204ENST00000409727 DZIP1LQ8IYY4 767 aaKnown RBP15.93■□□□□ 0.14
CHMP3-204ENST00000409727 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
CHMP3-204ENST00000409727 SPATA31A1Q5TZJ5 1347 aa15.92■□□□□ 0.14
CHMP3-204ENST00000409727 CABP4P57796 275 aa15.92■□□□□ 0.14
CHMP3-204ENST00000409727 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
CHMP3-204ENST00000409727 MEX3CQ5U5Q3 659 aaKnown RBP15.92■□□□□ 0.14
CHMP3-204ENST00000409727 SLIT2O94813 1529 aa15.92■□□□□ 0.14
CHMP3-204ENST00000409727 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
CHMP3-204ENST00000409727 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
CHMP3-204ENST00000409727 SIPA1L3O60292 1781 aaPredicted RBP15.9■□□□□ 0.14
CHMP3-204ENST00000409727 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
CHMP3-204ENST00000409727 EIF2S2P20042 333 aaKnown RBP15.9■□□□□ 0.14
CHMP3-204ENST00000409727 UNC5CLQ8IV45 518 aa15.9■□□□□ 0.14
CHMP3-204ENST00000409727 DISP2A7MBM2 1401 aa15.9■□□□□ 0.14
CHMP3-204ENST00000409727 NWD2Q9ULI1 1742 aa15.9■□□□□ 0.14
CHMP3-204ENST00000409727 SPATA31A5Q5VU36 1347 aa15.89■□□□□ 0.13
CHMP3-204ENST00000409727 SPATA31A7Q8IWB4 1347 aa15.89■□□□□ 0.13
CHMP3-204ENST00000409727 BRPF1P55201 1214 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-204ENST00000409727 ITPRIPQ8IWB1 547 aa15.89■□□□□ 0.13
CHMP3-204ENST00000409727 EXOC5O00471 708 aa15.88■□□□□ 0.13
CHMP3-204ENST00000409727 HDGFL1Q5TGJ6 251 aa15.88■□□□□ 0.13
CHMP3-204ENST00000409727 ZNF790Q6PG37 636 aa15.88■□□□□ 0.13
CHMP3-204ENST00000409727 STK31Q9BXU1 1019 aa15.88■□□□□ 0.13
CHMP3-204ENST00000409727 MS4A1P11836 297 aa15.88■□□□□ 0.13
CHMP3-204ENST00000409727 CCDC30Q5VVM6 783 aa15.88■□□□□ 0.13
CHMP3-204ENST00000409727 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
CHMP3-204ENST00000409727 PRAMEF22A3QJZ6 481 aa15.87■□□□□ 0.13
CHMP3-204ENST00000409727 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
CHMP3-204ENST00000409727 MVPQ14764 893 aaKnown RBP15.87■□□□□ 0.13
CHMP3-204ENST00000409727 TTC5Q8N0Z6 440 aa15.87■□□□□ 0.13
CHMP3-204ENST00000409727 USP21Q9UK80 565 aa15.87■□□□□ 0.13
CHMP3-204ENST00000409727 THRAP3Q9Y2W1 955 aaKnown RBP15.87■□□□□ 0.13
CHMP3-204ENST00000409727 MRC1P22897 1456 aa15.87■□□□□ 0.13
CHMP3-204ENST00000409727 BCL9LQ86UU0 1499 aa15.87■□□□□ 0.13
CHMP3-204ENST00000409727 NKX1-1Q15270 411 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-204ENST00000409727 G2E3Q7L622 706 aa15.86■□□□□ 0.13
CHMP3-204ENST00000409727 WNK3Q9BYP7 1800 aa15.86■□□□□ 0.13
CHMP3-204ENST00000409727 ARHGAP45Q92619 1136 aa15.86■□□□□ 0.13
CHMP3-204ENST00000409727 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
CHMP3-204ENST00000409727 DDB1Q16531 1140 aa15.85■□□□□ 0.13
CHMP3-204ENST00000409727 FAM98CQ17RN3 349 aaKnown RBP15.85■□□□□ 0.13
CHMP3-204ENST00000409727 FNBP4Q8N3X1 1017 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-204ENST00000409727 GIGYF1O75420 1035 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-204ENST00000409727 ZNF496Q96IT1 587 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-204ENST00000409727 CDCA7Q9BWT1 371 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-204ENST00000409727 API5Q9BZZ5 524 aaKnown RBP15.84■□□□□ 0.13
CHMP3-204ENST00000409727 SOS1Q07889 1333 aaPredicted RBP15.84■□□□□ 0.13
CHMP3-204ENST00000409727 A0A0G2JS52 829 aa15.84■□□□□ 0.13
CHMP3-204ENST00000409727 MYT1Q01538 1121 aa15.84■□□□□ 0.13
CHMP3-204ENST00000409727 VPS72Q15906 364 aa15.84■□□□□ 0.13
CHMP3-204ENST00000409727 TNS2Q63HR2 1409 aa15.84■□□□□ 0.13
CHMP3-204ENST00000409727 CHPF2Q9P2E5 772 aa15.84■□□□□ 0.13
CHMP3-204ENST00000409727 HOXB7P09629 217 aa15.83■□□□□ 0.12
CHMP3-204ENST00000409727 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
CHMP3-204ENST00000409727 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.12
CHMP3-204ENST00000409727 ANXA1P04083 346 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 BARGINQ6ZT62 677 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
CHMP3-204ENST00000409727 DDX19BQ9UMR2 479 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 HEG1Q9ULI3 1381 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 F6X3S4 739 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 FLIIQ13045 1269 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
CHMP3-204ENST00000409727 ABCC4O15439 1325 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 PTPRCP08575 1304 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 AFF2P51816 1311 aa15.82■□□□□ 0.12
CHMP3-204ENST00000409727 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
CHMP3-204ENST00000409727 FMNL2Q96PY5 1086 aa15.81■□□□□ 0.12
CHMP3-204ENST00000409727 PHAXQ9H814 394 aaKnown RBP15.81■□□□□ 0.12
CHMP3-204ENST00000409727 RGS12O14924 1447 aa15.81■□□□□ 0.12
CHMP3-204ENST00000409727 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
CHMP3-204ENST00000409727 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
CHMP3-204ENST00000409727 SLC4A10Q6U841 1118 aa15.8■□□□□ 0.12
CHMP3-204ENST00000409727 PIGBQ92521 554 aa15.8■□□□□ 0.12
CHMP3-204ENST00000409727 C5P01031 1676 aa15.79■□□□□ 0.12
CHMP3-204ENST00000409727 SNRPA1P09661 255 aaKnown RBP15.79■□□□□ 0.12
CHMP3-204ENST00000409727 MARCH10Q8NA82 808 aaPredicted RBP15.79■□□□□ 0.12
CHMP3-204ENST00000409727 PROSER3Q2NL68 480 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms