RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 ERVV-2B6SEH9 535 aa30.6■■■□□ 2.49
KDELR3-202ENST00000409006 CHD4Q14839 1912 aa30.6■■■□□ 2.49
KDELR3-202ENST00000409006 VIRMAQ69YN4 1812 aaKnown RBP30.6■■■□□ 2.49
KDELR3-202ENST00000409006 SCN11AQ9UI33 1791 aa30.59■■■□□ 2.49
KDELR3-202ENST00000409006 UTRNP46939 3433 aa30.59■■■□□ 2.49
KDELR3-202ENST00000409006 HSP90AB1P08238 724 aaKnown RBP30.59■■■□□ 2.49
KDELR3-202ENST00000409006 HMGB2P26583 209 aaKnown RBP30.59■■■□□ 2.49
KDELR3-202ENST00000409006 ATP6V1AP38606 617 aa30.59■■■□□ 2.49
KDELR3-202ENST00000409006 FLAD1Q8NFF5 587 aa30.58■■■□□ 2.49
KDELR3-202ENST00000409006 PHF14O94880 888 aa30.57■■■□□ 2.48
KDELR3-202ENST00000409006 CNGB1Q14028 1251 aaPredicted RBP30.57■■■□□ 2.48
KDELR3-202ENST00000409006 NLGN2Q8NFZ4 835 aa30.57■■■□□ 2.48
KDELR3-202ENST00000409006 SLC4A9Q96Q91 983 aa30.57■■■□□ 2.48
KDELR3-202ENST00000409006 ZNF831Q5JPB2 1677 aa30.56■■■□□ 2.48
KDELR3-202ENST00000409006 COL5A3P25940 1745 aaPredicted RBP30.56■■■□□ 2.48
KDELR3-202ENST00000409006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.55■■■□□ 2.48
KDELR3-202ENST00000409006 C1orf141Q5JVX7 400 aa30.54■■■□□ 2.48
KDELR3-202ENST00000409006 HMOX1P09601 288 aa30.53■■■□□ 2.48
KDELR3-202ENST00000409006 CABP4P57796 275 aa30.53■■■□□ 2.48
KDELR3-202ENST00000409006 NPC1L1Q9UHC9 1359 aa30.53■■■□□ 2.48
KDELR3-202ENST00000409006 GNPATO15228 680 aa30.51■■■□□ 2.47
KDELR3-202ENST00000409006 RBM42Q9BTD8 480 aaKnown RBP30.51■■■□□ 2.47
KDELR3-202ENST00000409006 MYH14Q7Z406 1995 aaKnown RBP30.51■■■□□ 2.47
KDELR3-202ENST00000409006 SSFA2P28290 1259 aa30.5■■■□□ 2.47
KDELR3-202ENST00000409006 NFATC2IPQ8NCF5 419 aa30.5■■■□□ 2.47
KDELR3-202ENST00000409006 COL3A1P02461 1466 aaPredicted RBP30.5■■■□□ 2.47
KDELR3-202ENST00000409006 DIAPH1O60610 1272 aaKnown RBP30.48■■■□□ 2.47
KDELR3-202ENST00000409006 GPR162Q16538 588 aa30.48■■■□□ 2.47
KDELR3-202ENST00000409006 AKAP4Q5JQC9 854 aa30.45■■■□□ 2.47
KDELR3-202ENST00000409006 PELP1Q8IZL8 1130 aaKnown RBP30.45■■■□□ 2.47
KDELR3-202ENST00000409006 LGR6Q9HBX8 967 aa30.45■■■□□ 2.47
KDELR3-202ENST00000409006 TJP1Q07157 1748 aa30.44■■■□□ 2.46
KDELR3-202ENST00000409006 PTCD1O75127 700 aaKnown RBP30.43■■■□□ 2.46
KDELR3-202ENST00000409006 MTHFSDQ2M296 383 aaKnown RBP30.42■■■□□ 2.46
KDELR3-202ENST00000409006 ADAMTS7Q9UKP4 1686 aa30.42■■■□□ 2.46
KDELR3-202ENST00000409006 C4AP0C0L4 1744 aa30.41■■■□□ 2.46
KDELR3-202ENST00000409006 YBX3P16989 372 aaKnown RBP eCLIP30.4■■■□□ 2.46
KDELR3-202ENST00000409006 CD2APQ9Y5K6 639 aa30.4■■■□□ 2.46
KDELR3-202ENST00000409006 GOLGB1Q14789 3259 aaKnown RBP30.4■■■□□ 2.46
KDELR3-202ENST00000409006 RC3H1Q5TC82 1133 aaKnown RBP30.39■■■□□ 2.46
KDELR3-202ENST00000409006 RTCBQ9Y3I0 505 aaKnown RBP30.39■■■□□ 2.46
KDELR3-202ENST00000409006 CNTNAP4Q9C0A0 1308 aa30.39■■■□□ 2.46
KDELR3-202ENST00000409006 CICQ96RK0 1608 aaPredicted RBP30.39■■■□□ 2.46
KDELR3-202ENST00000409006 MRC1P22897 1456 aa30.38■■■□□ 2.45
KDELR3-202ENST00000409006 RNMTO43148 476 aaKnown RBP30.38■■■□□ 2.45
KDELR3-202ENST00000409006 TRAPPC3LQ5T215 181 aa30.38■■■□□ 2.45
KDELR3-202ENST00000409006 SLC52A2Q9HAB3 445 aa30.38■■■□□ 2.45
KDELR3-202ENST00000409006 U2SURPO15042 1029 aaKnown RBP30.36■■■□□ 2.45
KDELR3-202ENST00000409006 ZNF784Q8NCA9 323 aaPredicted RBP30.36■■■□□ 2.45
KDELR3-202ENST00000409006 ARHGEF1Q92888 912 aaKnown RBP30.36■■■□□ 2.45
KDELR3-202ENST00000409006 RPS6KA4O75676 772 aa30.35■■■□□ 2.45
KDELR3-202ENST00000409006 SLC39A6Q13433 755 aa30.33■■■□□ 2.45
KDELR3-202ENST00000409006 CRKLP46109 303 aaKnown RBP30.32■■■□□ 2.44
KDELR3-202ENST00000409006 KIF13BQ9NQT8 1826 aa30.31■■■□□ 2.44
KDELR3-202ENST00000409006 MMP10P09238 476 aa30.31■■■□□ 2.44
KDELR3-202ENST00000409006 ADRA2BP18089 450 aa30.3■■■□□ 2.44
KDELR3-202ENST00000409006 KCPQ6ZWJ8 1503 aa30.3■■■□□ 2.44
KDELR3-202ENST00000409006 UBR2Q8IWV8 1755 aa30.29■■■□□ 2.44
KDELR3-202ENST00000409006 DNAJC10Q8IXB1 793 aa30.29■■■□□ 2.44
KDELR3-202ENST00000409006 SIPA1L3O60292 1781 aaPredicted RBP30.28■■■□□ 2.44
KDELR3-202ENST00000409006 KIAA1551Q9HCM1 1747 aa30.28■■■□□ 2.44
KDELR3-202ENST00000409006 GYS1P13807 737 aa30.28■■■□□ 2.44
KDELR3-202ENST00000409006 INTS5Q6P9B9 1019 aaKnown RBP30.28■■■□□ 2.44
KDELR3-202ENST00000409006 PPP2R1AP30153 589 aa30.27■■■□□ 2.44
KDELR3-202ENST00000409006 RFC4P35249 363 aa30.27■■■□□ 2.44
KDELR3-202ENST00000409006 WWC3Q9ULE0 1092 aa30.27■■■□□ 2.44
KDELR3-202ENST00000409006 N4BP2Q86UW6 1770 aaPredicted RBP30.27■■■□□ 2.44
KDELR3-202ENST00000409006 NLGN1Q8N2Q7 840 aa30.26■■■□□ 2.43
KDELR3-202ENST00000409006 GRIN3BO60391 1043 aa30.25■■■□□ 2.43
KDELR3-202ENST00000409006 IL17REQ8NFR9 667 aa30.24■■■□□ 2.43
KDELR3-202ENST00000409006 PHACTR3Q96KR7 559 aa30.24■■■□□ 2.43
KDELR3-202ENST00000409006 SRP68Q9UHB9 627 aaKnown RBP30.24■■■□□ 2.43
KDELR3-202ENST00000409006 CFAP53Q96M91 514 aa30.23■■■□□ 2.43
KDELR3-202ENST00000409006 RSPH6AQ9H0K4 717 aa30.23■■■□□ 2.43
KDELR3-202ENST00000409006 GNAT3A8MTJ3 354 aa30.21■■■□□ 2.43
KDELR3-202ENST00000409006 CYP19A1P11511 503 aaPredicted RBP30.21■■■□□ 2.43
KDELR3-202ENST00000409006 PRKAR2BP31323 418 aa30.21■■■□□ 2.43
KDELR3-202ENST00000409006 GAS2L2Q8NHY3 880 aa30.21■■■□□ 2.43
KDELR3-202ENST00000409006 CCDC87Q9NVE4 849 aa30.2■■■□□ 2.43
KDELR3-202ENST00000409006 USP42Q9H9J4 1324 aaKnown RBP30.2■■■□□ 2.42
KDELR3-202ENST00000409006 PXDNLA1KZ92 1463 aa30.19■■■□□ 2.42
KDELR3-202ENST00000409006 FKBP8Q14318 412 aa30.18■■■□□ 2.42
KDELR3-202ENST00000409006 C10orf71Q711Q0 1435 aa30.18■■■□□ 2.42
KDELR3-202ENST00000409006 SOS1Q07889 1333 aaPredicted RBP30.17■■■□□ 2.42
KDELR3-202ENST00000409006 BRCA1P38398 1863 aaKnown RBP30.16■■■□□ 2.42
KDELR3-202ENST00000409006 U2AF1L5P0DN76 240 aaPredicted RBP30.15■■■□□ 2.42
KDELR3-202ENST00000409006 U2AF1Q01081 240 aaKnown RBP eCLIP30.15■■■□□ 2.42
KDELR3-202ENST00000409006 NUDCQ9Y266 331 aa30.15■■■□□ 2.42
KDELR3-202ENST00000409006 ZBTB1Q9Y2K1 713 aa30.15■■■□□ 2.42
KDELR3-202ENST00000409006 PARP3Q9Y6F1 533 aa30.15■■■□□ 2.42
KDELR3-202ENST00000409006 TEFQ10587 303 aa30.14■■■□□ 2.42
KDELR3-202ENST00000409006 VSIG10Q8N0Z9 540 aa30.14■■■□□ 2.42
KDELR3-202ENST00000409006 A0A0G2JLW4 131 aa30.13■■■□□ 2.41
KDELR3-202ENST00000409006 DDR1Q08345 913 aa30.13■■■□□ 2.41
KDELR3-202ENST00000409006 CEMIPQ8WUJ3 1361 aa30.13■■■□□ 2.41
KDELR3-202ENST00000409006 TTC5Q8N0Z6 440 aa30.12■■■□□ 2.41
KDELR3-202ENST00000409006 ZNF496Q96IT1 587 aaPredicted RBP30.12■■■□□ 2.41
KDELR3-202ENST00000409006 AFDNP55196 1824 aaKnown RBP30.11■■■□□ 2.41
KDELR3-202ENST00000409006 TGFB2P61812 414 aa30.11■■■□□ 2.41
KDELR3-202ENST00000409006 USPL1Q5W0Q7 1092 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms