RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 JCADQ9P266 1359 aa13.13□□□□□ -0.31
SNORD88C-201ENST00000408061 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
SNORD88C-201ENST00000408061 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
SNORD88C-201ENST00000408061 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
SNORD88C-201ENST00000408061 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
SNORD88C-201ENST00000408061 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
SNORD88C-201ENST00000408061 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
SNORD88C-201ENST00000408061 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
SNORD88C-201ENST00000408061 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
SNORD88C-201ENST00000408061 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
SNORD88C-201ENST00000408061 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
SNORD88C-201ENST00000408061 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
SNORD88C-201ENST00000408061 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
SNORD88C-201ENST00000408061 MRC1P22897 1456 aa13.11□□□□□ -0.31
SNORD88C-201ENST00000408061 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
SNORD88C-201ENST00000408061 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
SNORD88C-201ENST00000408061 STRN4Q9NRL3 753 aa13.11□□□□□ -0.31
SNORD88C-201ENST00000408061 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
SNORD88C-201ENST00000408061 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
SNORD88C-201ENST00000408061 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
SNORD88C-201ENST00000408061 CYP27B1O15528 508 aa13.1□□□□□ -0.31
SNORD88C-201ENST00000408061 ABCC4O15439 1325 aa13.1□□□□□ -0.31
SNORD88C-201ENST00000408061 PLCH1Q4KWH8 1693 aa13.09□□□□□ -0.31
SNORD88C-201ENST00000408061 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
SNORD88C-201ENST00000408061 RLBP1P12271 317 aa13.09□□□□□ -0.31
SNORD88C-201ENST00000408061 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
SNORD88C-201ENST00000408061 CABP4P57796 275 aa13.08□□□□□ -0.32
SNORD88C-201ENST00000408061 RWDD1Q9H446 243 aaPredicted RBP13.08□□□□□ -0.32
SNORD88C-201ENST00000408061 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 ITPRIPQ8IWB1 547 aa13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 ZBTB40Q9NUA8 1239 aa13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
SNORD88C-201ENST00000408061 EXOC5O00471 708 aa13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 CCT4P50991 539 aaKnown RBP13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 KRT24Q2M2I5 525 aa13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 SLIT2O94813 1529 aa13.06□□□□□ -0.32
SNORD88C-201ENST00000408061 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
SNORD88C-201ENST00000408061 ZBTB7BO15156 539 aaPredicted RBP13.05□□□□□ -0.32
SNORD88C-201ENST00000408061 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
SNORD88C-201ENST00000408061 BARGINQ6ZT62 677 aa13.05□□□□□ -0.32
SNORD88C-201ENST00000408061 FMNL2Q96PY5 1086 aa13.05□□□□□ -0.32
SNORD88C-201ENST00000408061 SNRPA1P09661 255 aaKnown RBP13.04□□□□□ -0.32
SNORD88C-201ENST00000408061 FLIIQ13045 1269 aa13.04□□□□□ -0.32
SNORD88C-201ENST00000408061 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
SNORD88C-201ENST00000408061 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
SNORD88C-201ENST00000408061 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
SNORD88C-201ENST00000408061 LRP6O75581 1613 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 SHANK3Q9BYB0 1731 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 FNBP4Q8N3X1 1017 aaPredicted RBP13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 WNK3Q9BYP7 1800 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 SPATA31A5Q5VU36 1347 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 SPATA31A7Q8IWB4 1347 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 PXDNLA1KZ92 1463 aa13.03□□□□□ -0.32
SNORD88C-201ENST00000408061 TEX13AQ9BXU3 409 aaPredicted RBP13.02□□□□□ -0.33
SNORD88C-201ENST00000408061 DDX21Q9NR30 783 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNORD88C-201ENST00000408061 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.33
SNORD88C-201ENST00000408061 TNNQ9UQP3 1299 aa13.02□□□□□ -0.33
SNORD88C-201ENST00000408061 IBTKQ9P2D0 1353 aaPredicted RBP13.02□□□□□ -0.33
SNORD88C-201ENST00000408061 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 DDX58O95786 925 aaKnown RBP13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 FKBP5Q13451 457 aaPredicted RBP13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 VPS72Q15906 364 aa13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 DDX54Q8TDD1 881 aaKnown RBP13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 RGS12O14924 1447 aa13.01□□□□□ -0.33
SNORD88C-201ENST00000408061 N4BP2Q86UW6 1770 aaPredicted RBP13□□□□□ -0.33
SNORD88C-201ENST00000408061 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
SNORD88C-201ENST00000408061 TNS2Q63HR2 1409 aa13□□□□□ -0.33
SNORD88C-201ENST00000408061 KCNQ3O43525 872 aa13□□□□□ -0.33
SNORD88C-201ENST00000408061 GNAI3P08754 354 aa13□□□□□ -0.33
SNORD88C-201ENST00000408061 RPAP2Q8IXW5 612 aaPredicted RBP13□□□□□ -0.33
SNORD88C-201ENST00000408061 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
SNORD88C-201ENST00000408061 NGLY1Q96IV0 654 aa13□□□□□ -0.33
SNORD88C-201ENST00000408061 PCDHB15Q9Y5E8 787 aa13□□□□□ -0.33
SNORD88C-201ENST00000408061 EIF2S2P20042 333 aaKnown RBP12.99□□□□□ -0.33
SNORD88C-201ENST00000408061 DDB1Q16531 1140 aa12.99□□□□□ -0.33
SNORD88C-201ENST00000408061 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
SNORD88C-201ENST00000408061 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
SNORD88C-201ENST00000408061 UBR2Q8IWV8 1755 aa12.99□□□□□ -0.33
SNORD88C-201ENST00000408061 G2E3Q7L622 706 aa12.98□□□□□ -0.33
SNORD88C-201ENST00000408061 GCC1Q96CN9 775 aa12.98□□□□□ -0.33
SNORD88C-201ENST00000408061 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
SNORD88C-201ENST00000408061 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
SNORD88C-201ENST00000408061 IGHDP01880 384 aa12.97□□□□□ -0.33
SNORD88C-201ENST00000408061 KSR2Q6VAB6 950 aa12.97□□□□□ -0.33
SNORD88C-201ENST00000408061 SMC5Q8IY18 1101 aa12.97□□□□□ -0.33
SNORD88C-201ENST00000408061 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
SNORD88C-201ENST00000408061 LAMB4A4D0S4 1761 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms