RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 KIF5CO60282 957 aa12.52□□□□□ -0.4
LTBP1-204ENST00000407925 TMEM266Q2M3C6 531 aa12.52□□□□□ -0.4
LTBP1-204ENST00000407925 CAVIN4Q5BKX8 364 aa12.52□□□□□ -0.4
LTBP1-204ENST00000407925 C9orf84Q5VXU9 1444 aa12.52□□□□□ -0.41
LTBP1-204ENST00000407925 CCDC102AQ96A19 550 aa12.52□□□□□ -0.41
LTBP1-204ENST00000407925 PLCD4Q9BRC7 762 aa12.52□□□□□ -0.41
LTBP1-204ENST00000407925 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.41
LTBP1-204ENST00000407925 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.41
LTBP1-204ENST00000407925 USO1O60763 962 aaKnown RBP12.52□□□□□ -0.41
LTBP1-204ENST00000407925 CAVIN2O95810 425 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 MATR3P43243 847 aaKnown RBP eCLIP12.51□□□□□ -0.41
LTBP1-204ENST00000407925 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 CTCFLQ8NI51 663 aaPredicted RBP12.51□□□□□ -0.41
LTBP1-204ENST00000407925 ERICH3Q5RHP9 1530 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 ESPNB1AK53 854 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 FILIP1Q7Z7B0 1213 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 ZSCAN30Q86W11 494 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 AFAP1Q8N556 730 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 SLC12A5Q9H2X9 1139 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 GCOM1H8Y6P7 765 aaPredicted RBP12.51□□□□□ -0.41
LTBP1-204ENST00000407925 MYZAPP0CAP1 466 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 CETN1Q12798 172 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
LTBP1-204ENST00000407925 RUSC2Q8N2Y8 1516 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 CCDC150Q8NCX0 1101 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 TAOK3Q9H2K8 898 aa12.51□□□□□ -0.41
LTBP1-204ENST00000407925 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 PAFAH1B1P43034 410 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 CWC27Q6UX04 472 aaKnown RBP12.5□□□□□ -0.41
LTBP1-204ENST00000407925 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 FEZ1Q99689 392 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 SMC1AQ14683 1233 aaKnown RBP12.5□□□□□ -0.41
LTBP1-204ENST00000407925 CCDC12Q8WUD4 166 aaPredicted RBP12.5□□□□□ -0.41
LTBP1-204ENST00000407925 DHX29Q7Z478 1369 aaKnown RBP12.5□□□□□ -0.41
LTBP1-204ENST00000407925 IDH1O75874 414 aaKnown RBP12.5□□□□□ -0.41
LTBP1-204ENST00000407925 ANAPC15P60006 121 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 IQCA1Q86XH1 822 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 RRP9O43818 475 aaKnown RBP12.5□□□□□ -0.41
LTBP1-204ENST00000407925 BCAR3O75815 825 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 MAP3K12Q12852 859 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 PTPN14Q15678 1187 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 CCDC183Q5T5S1 534 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 DDX12PQ92771 950 aa12.5□□□□□ -0.41
LTBP1-204ENST00000407925 NAA15Q9BXJ9 866 aaKnown RBP12.5□□□□□ -0.41
LTBP1-204ENST00000407925 UQCRHLA0A096LP55 91 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 UQCRHP07919 91 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 MYL6BP14649 208 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 METTL24Q5JXM2 366 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 MX1P20591 662 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
LTBP1-204ENST00000407925 STXBP4Q6ZWJ1 553 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 CACNA2D4Q7Z3S7 1137 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 CUL5Q93034 780 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 HOOK3Q86VS8 718 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 GSDMDP57764 484 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 DYDC1Q8WWB3 177 aa12.49□□□□□ -0.41
LTBP1-204ENST00000407925 CASTP20810 708 aaKnown RBP12.48□□□□□ -0.41
LTBP1-204ENST00000407925 AMPD3Q01432 767 aa12.48□□□□□ -0.41
LTBP1-204ENST00000407925 FAM177A1Q8N128 213 aaPredicted RBP12.48□□□□□ -0.41
LTBP1-204ENST00000407925 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
LTBP1-204ENST00000407925 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
LTBP1-204ENST00000407925 TTC21AQ8NDW8 1320 aa12.48□□□□□ -0.41
LTBP1-204ENST00000407925 SSR1P43307 286 aaKnown RBP12.48□□□□□ -0.41
LTBP1-204ENST00000407925 NAPBQ9H115 298 aa12.48□□□□□ -0.41
LTBP1-204ENST00000407925 YEATS4O95619 227 aa12.48□□□□□ -0.41
LTBP1-204ENST00000407925 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
LTBP1-204ENST00000407925 MKNK2Q9HBH9 465 aa12.48□□□□□ -0.41
LTBP1-204ENST00000407925 USP5P45974 858 aa12.47□□□□□ -0.41
LTBP1-204ENST00000407925 POLR3DP05423 398 aaPredicted RBP12.47□□□□□ -0.41
LTBP1-204ENST00000407925 TOP1P11387 765 aaKnown RBP12.47□□□□□ -0.41
LTBP1-204ENST00000407925 TROQ12816 1431 aaPredicted RBP12.47□□□□□ -0.41
LTBP1-204ENST00000407925 TRAF1Q13077 416 aa12.47□□□□□ -0.41
LTBP1-204ENST00000407925 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
LTBP1-204ENST00000407925 C8orf76Q96K31 380 aa12.47□□□□□ -0.41
LTBP1-204ENST00000407925 A0A087WZG4 1122 aa12.47□□□□□ -0.41
LTBP1-204ENST00000407925 KANK3Q6NY19 840 aa12.47□□□□□ -0.41
LTBP1-204ENST00000407925 FAM114A1Q8IWE2 563 aa12.47□□□□□ -0.41
LTBP1-204ENST00000407925 BAG4O95429 457 aaKnown RBP12.47□□□□□ -0.41
LTBP1-204ENST00000407925 PPM1EQ8WY54 764 aa12.47□□□□□ -0.41
LTBP1-204ENST00000407925 TMPOP42166 694 aaKnown RBP12.46□□□□□ -0.41
LTBP1-204ENST00000407925 FERMT1Q9BQL6 677 aa12.46□□□□□ -0.41
LTBP1-204ENST00000407925 SLC5A1P13866 664 aa12.46□□□□□ -0.42
LTBP1-204ENST00000407925 FAM193AP78312 1265 aa12.46□□□□□ -0.42
LTBP1-204ENST00000407925 SLFN5Q08AF3 891 aa12.46□□□□□ -0.42
LTBP1-204ENST00000407925 ALS2CR12Q96Q35 445 aa12.46□□□□□ -0.42
LTBP1-204ENST00000407925 RAD54L2Q9Y4B4 1467 aa12.46□□□□□ -0.42
LTBP1-204ENST00000407925 LDHCP07864 332 aa12.46□□□□□ -0.42
LTBP1-204ENST00000407925 MCM5P33992 734 aa12.46□□□□□ -0.42
LTBP1-204ENST00000407925 BCL11BQ9C0K0 894 aaPredicted RBP12.46□□□□□ -0.42
LTBP1-204ENST00000407925 KIF4BQ2VIQ3 1234 aa12.45□□□□□ -0.42
LTBP1-204ENST00000407925 PPP4R3BQ5MIZ7 849 aa12.45□□□□□ -0.42
LTBP1-204ENST00000407925 CCDC194A0A1B0GVG4 234 aa12.45□□□□□ -0.42
LTBP1-204ENST00000407925 GSTTP1A0A1W2PQM5 241 aa12.45□□□□□ -0.42
LTBP1-204ENST00000407925 CASQ1P31415 396 aa12.45□□□□□ -0.42
LTBP1-204ENST00000407925 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
LTBP1-204ENST00000407925 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms