RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.71□□□□□ -1.02
RPA3-204ENST00000406109 FYB1O15117 783 aa8.71□□□□□ -1.02
RPA3-204ENST00000406109 EVX2Q03828 476 aa8.71□□□□□ -1.02
RPA3-204ENST00000406109 HSP90AB2PQ58FF8 381 aa8.71□□□□□ -1.02
RPA3-204ENST00000406109 PIGBQ92521 554 aa8.71□□□□□ -1.02
RPA3-204ENST00000406109 CLEC11AQ9Y240 323 aa8.71□□□□□ -1.02
RPA3-204ENST00000406109 CICQ96RK0 1608 aaPredicted RBP8.71□□□□□ -1.02
RPA3-204ENST00000406109 KIAA1551Q9HCM1 1747 aa8.71□□□□□ -1.02
RPA3-204ENST00000406109 PHF14O94880 888 aa8.7□□□□□ -1.02
RPA3-204ENST00000406109 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
RPA3-204ENST00000406109 RAPGEF4Q8WZA2 1011 aa8.7□□□□□ -1.02
RPA3-204ENST00000406109 PCDH11XQ9BZA7 1347 aa8.7□□□□□ -1.02
RPA3-204ENST00000406109 PCDH11YQ9BZA8 1340 aa8.7□□□□□ -1.02
RPA3-204ENST00000406109 KIF13BQ9NQT8 1826 aa8.7□□□□□ -1.02
RPA3-204ENST00000406109 TATP17735 454 aaPredicted RBP8.69□□□□□ -1.02
RPA3-204ENST00000406109 SSFA2P28290 1259 aa8.69□□□□□ -1.02
RPA3-204ENST00000406109 APLP1P51693 650 aa8.69□□□□□ -1.02
RPA3-204ENST00000406109 NKX1-1Q15270 411 aaPredicted RBP8.69□□□□□ -1.02
RPA3-204ENST00000406109 SPDYE1Q8NFV5 336 aaPredicted RBP8.69□□□□□ -1.02
RPA3-204ENST00000406109 AK7Q96M32 723 aa8.69□□□□□ -1.02
RPA3-204ENST00000406109 GGNBP2Q9H3C7 697 aa8.69□□□□□ -1.02
RPA3-204ENST00000406109 SSUH2Q9Y2M2 353 aa8.69□□□□□ -1.02
RPA3-204ENST00000406109 INSRP06213 1382 aa8.69□□□□□ -1.02
RPA3-204ENST00000406109 N4BP2Q86UW6 1770 aaPredicted RBP8.68□□□□□ -1.02
RPA3-204ENST00000406109 ST20-MTHFSA0A0A6YYL1 179 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 LOC102724428A0A0B4J2F2 783 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 PRKAR2AP13861 404 aaKnown RBP8.68□□□□□ -1.02
RPA3-204ENST00000406109 SIK1P57059 783 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 ITPK1Q13572 414 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
RPA3-204ENST00000406109 CLSPNQ9HAW4 1339 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 NCAPD2Q15021 1401 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 PXDNLA1KZ92 1463 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
RPA3-204ENST00000406109 TOMM70O94826 608 aa8.67□□□□□ -1.02
RPA3-204ENST00000406109 HMGB2P26583 209 aaKnown RBP8.67□□□□□ -1.02
RPA3-204ENST00000406109 BRCA1P38398 1863 aaKnown RBP8.67□□□□□ -1.02
RPA3-204ENST00000406109 NSD3Q9BZ95 1437 aa8.67□□□□□ -1.02
RPA3-204ENST00000406109 ASAP1Q9ULH1 1129 aa8.67□□□□□ -1.02
RPA3-204ENST00000406109 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
RPA3-204ENST00000406109 FLT4P35916 1363 aa8.66□□□□□ -1.02
RPA3-204ENST00000406109 A0A0G2JLW4 131 aa8.66□□□□□ -1.02
RPA3-204ENST00000406109 MMP10P09238 476 aa8.66□□□□□ -1.02
RPA3-204ENST00000406109 KCNA3P22001 575 aa8.66□□□□□ -1.02
RPA3-204ENST00000406109 HTRA3P83110 453 aa8.66□□□□□ -1.02
RPA3-204ENST00000406109 COL13A1Q5TAT6 717 aaPredicted RBP8.66□□□□□ -1.02
RPA3-204ENST00000406109 SLC4A9Q96Q91 983 aa8.66□□□□□ -1.02
RPA3-204ENST00000406109 NMRK2Q9NPI5 230 aa8.66□□□□□ -1.02
RPA3-204ENST00000406109 MYH14Q7Z406 1995 aaKnown RBP8.66□□□□□ -1.02
RPA3-204ENST00000406109 SMG6Q86US8 1419 aaKnown RBP8.65□□□□□ -1.02
RPA3-204ENST00000406109 KIF24Q5T7B8 1368 aa8.65□□□□□ -1.02
RPA3-204ENST00000406109 GNPATO15228 680 aa8.65□□□□□ -1.02
RPA3-204ENST00000406109 TGFB2P61812 414 aa8.65□□□□□ -1.02
RPA3-204ENST00000406109 ATG3Q9NT62 314 aa8.65□□□□□ -1.02
RPA3-204ENST00000406109 EMILIN1Q9Y6C2 1016 aa8.65□□□□□ -1.02
RPA3-204ENST00000406109 WDR90Q96KV7 1748 aa8.65□□□□□ -1.03
RPA3-204ENST00000406109 C10orf71Q711Q0 1435 aa8.64□□□□□ -1.03
RPA3-204ENST00000406109 DPEP1P16444 411 aa8.64□□□□□ -1.03
RPA3-204ENST00000406109 ATP6V1AP38606 617 aa8.64□□□□□ -1.03
RPA3-204ENST00000406109 JMYQ8N9B5 988 aa8.64□□□□□ -1.03
RPA3-204ENST00000406109 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
RPA3-204ENST00000406109 BCS1LQ9Y276 419 aa8.64□□□□□ -1.03
RPA3-204ENST00000406109 KDRP35968 1356 aa8.63□□□□□ -1.03
RPA3-204ENST00000406109 ARHGAP27Q6ZUM4 889 aa8.63□□□□□ -1.03
RPA3-204ENST00000406109 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
RPA3-204ENST00000406109 KLRG1Q96E93 195 aa8.63□□□□□ -1.03
RPA3-204ENST00000406109 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.63□□□□□ -1.03
RPA3-204ENST00000406109 TMOD3Q9NYL9 352 aa8.63□□□□□ -1.03
RPA3-204ENST00000406109 SBF1O95248 1867 aa8.63□□□□□ -1.03
RPA3-204ENST00000406109 KIF20BQ96Q89 1820 aa8.63□□□□□ -1.03
RPA3-204ENST00000406109 ARFGEF1Q9Y6D6 1849 aa8.63□□□□□ -1.03
RPA3-204ENST00000406109 GYS1P13807 737 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 PHKG2P15735 406 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 TMF1P82094 1093 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 TRAPPC3LQ5T215 181 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 C9orf131Q5VYM1 1079 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 ARHGEF1Q92888 912 aaKnown RBP8.62□□□□□ -1.03
RPA3-204ENST00000406109 EYA1Q99502 592 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 SPG7Q9UQ90 795 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 ANKRD26Q9UPS8 1709 aa8.62□□□□□ -1.03
RPA3-204ENST00000406109 WASHC2AQ641Q2 1341 aa8.61□□□□□ -1.03
RPA3-204ENST00000406109 C4AP0C0L4 1744 aa8.61□□□□□ -1.03
RPA3-204ENST00000406109 COL5A3P25940 1745 aaPredicted RBP8.61□□□□□ -1.03
RPA3-204ENST00000406109 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
RPA3-204ENST00000406109 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
RPA3-204ENST00000406109 ZNF831Q5JPB2 1677 aa8.61□□□□□ -1.03
RPA3-204ENST00000406109 SLC24A1O60721 1099 aa8.6□□□□□ -1.03
RPA3-204ENST00000406109 FCHSD2O94868 740 aa8.6□□□□□ -1.03
RPA3-204ENST00000406109 FSTL1Q12841 308 aa8.6□□□□□ -1.03
RPA3-204ENST00000406109 IFNL2Q8IZJ0 200 aa8.6□□□□□ -1.03
RPA3-204ENST00000406109 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
RPA3-204ENST00000406109 RTCBQ9Y3I0 505 aaKnown RBP8.6□□□□□ -1.03
RPA3-204ENST00000406109 KCPQ6ZWJ8 1503 aa8.59□□□□□ -1.03
RPA3-204ENST00000406109 RPS6KA4O75676 772 aa8.59□□□□□ -1.03
RPA3-204ENST00000406109 RRAGCQ9HB90 399 aa8.59□□□□□ -1.03
RPA3-204ENST00000406109 CCDC87Q9NVE4 849 aa8.59□□□□□ -1.03
RPA3-204ENST00000406109 POLKQ9UBT6 870 aa8.59□□□□□ -1.03
RPA3-204ENST00000406109 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
RPA3-204ENST00000406109 ERVV-2B6SEH9 535 aa8.58□□□□□ -1.04
RPA3-204ENST00000406109 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms