RNA–Protein interactions for RNA: ENST00000405801.2

FSCN1-202, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 4

Gene FSCN1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-202ENST00000405801 CHD4Q14839 1912 aa25.24■■□□□ 1.63
FSCN1-202ENST00000405801 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
FSCN1-202ENST00000405801 AMIGO3Q86WK7 504 aa25.24■■□□□ 1.63
FSCN1-202ENST00000405801 LINC00116Q8NCU8 138 aa25.24■■□□□ 1.63
FSCN1-202ENST00000405801 HSP90AB1P08238 724 aaKnown RBP25.23■■□□□ 1.63
FSCN1-202ENST00000405801 DCAF5Q96JK2 942 aa25.23■■□□□ 1.63
FSCN1-202ENST00000405801 ATG3Q9NT62 314 aa25.23■■□□□ 1.63
FSCN1-202ENST00000405801 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
FSCN1-202ENST00000405801 ERVV-2B6SEH9 535 aa25.22■■□□□ 1.63
FSCN1-202ENST00000405801 ITPK1Q13572 414 aa25.22■■□□□ 1.63
FSCN1-202ENST00000405801 ZNF831Q5JPB2 1677 aa25.22■■□□□ 1.63
FSCN1-202ENST00000405801 PPP2R1AP30153 589 aa25.21■■□□□ 1.63
FSCN1-202ENST00000405801 NLGN2Q8NFZ4 835 aa25.21■■□□□ 1.63
FSCN1-202ENST00000405801 PHF14O94880 888 aa25.19■■□□□ 1.62
FSCN1-202ENST00000405801 HMOX1P09601 288 aa25.19■■□□□ 1.62
FSCN1-202ENST00000405801 ATP6V1AP38606 617 aa25.19■■□□□ 1.62
FSCN1-202ENST00000405801 SMIM5Q71RC9 77 aa25.19■■□□□ 1.62
FSCN1-202ENST00000405801 COL5A3P25940 1745 aaPredicted RBP25.19■■□□□ 1.62
FSCN1-202ENST00000405801 GOLGB1Q14789 3259 aaKnown RBP25.18■■□□□ 1.62
FSCN1-202ENST00000405801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.18■■□□□ 1.62
FSCN1-202ENST00000405801 SSFA2P28290 1259 aa25.18■■□□□ 1.62
FSCN1-202ENST00000405801 GPR162Q16538 588 aa25.18■■□□□ 1.62
FSCN1-202ENST00000405801 CFAP53Q96M91 514 aa25.18■■□□□ 1.62
FSCN1-202ENST00000405801 SCN11AQ9UI33 1791 aa25.17■■□□□ 1.62
FSCN1-202ENST00000405801 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
FSCN1-202ENST00000405801 GNPATO15228 680 aa25.15■■□□□ 1.62
FSCN1-202ENST00000405801 DDX10Q13206 875 aaKnown RBP25.15■■□□□ 1.62
FSCN1-202ENST00000405801 SLC4A9Q96Q91 983 aa25.15■■□□□ 1.62
FSCN1-202ENST00000405801 CABP4P57796 275 aa25.14■■□□□ 1.62
FSCN1-202ENST00000405801 PELP1Q8IZL8 1130 aaKnown RBP25.14■■□□□ 1.62
FSCN1-202ENST00000405801 U2SURPO15042 1029 aaKnown RBP25.13■■□□□ 1.61
FSCN1-202ENST00000405801 AKAP4Q5JQC9 854 aa25.13■■□□□ 1.61
FSCN1-202ENST00000405801 RBM42Q9BTD8 480 aaKnown RBP25.13■■□□□ 1.61
FSCN1-202ENST00000405801 NUDCQ9Y266 331 aa25.11■■□□□ 1.61
FSCN1-202ENST00000405801 VIRMAQ69YN4 1812 aaKnown RBP25.11■■□□□ 1.61
FSCN1-202ENST00000405801 CICQ96RK0 1608 aaPredicted RBP25.11■■□□□ 1.61
FSCN1-202ENST00000405801 MTHFSDQ2M296 383 aaKnown RBP25.1■■□□□ 1.61
FSCN1-202ENST00000405801 CD2APQ9Y5K6 639 aa25.1■■□□□ 1.61
FSCN1-202ENST00000405801 TJP1Q07157 1748 aa25.09■■□□□ 1.61
FSCN1-202ENST00000405801 ZNF784Q8NCA9 323 aaPredicted RBP25.09■■□□□ 1.61
FSCN1-202ENST00000405801 NFATC2IPQ8NCF5 419 aa25.08■■□□□ 1.61
FSCN1-202ENST00000405801 CNTNAP4Q9C0A0 1308 aa25.08■■□□□ 1.6
FSCN1-202ENST00000405801 MRC1P22897 1456 aa25.08■■□□□ 1.6
FSCN1-202ENST00000405801 MYH14Q7Z406 1995 aaKnown RBP25.07■■□□□ 1.6
FSCN1-202ENST00000405801 YBX3P16989 372 aaKnown RBP eCLIP25.07■■□□□ 1.61e-9■□□□□ 8.6
FSCN1-202ENST00000405801 ADAMTS7Q9UKP4 1686 aa25.07■■□□□ 1.6
FSCN1-202ENST00000405801 C4AP0C0L4 1744 aa25.06■■□□□ 1.6
FSCN1-202ENST00000405801 RALBP1Q15311 655 aa25.06■■□□□ 1.6
FSCN1-202ENST00000405801 RC3H1Q5TC82 1133 aaKnown RBP25.06■■□□□ 1.6
FSCN1-202ENST00000405801 RSPH6AQ9H0K4 717 aa25.06■■□□□ 1.6
FSCN1-202ENST00000405801 RTCBQ9Y3I0 505 aaKnown RBP25.06■■□□□ 1.6
FSCN1-202ENST00000405801 RNMTO43148 476 aaKnown RBP25.04■■□□□ 1.6
FSCN1-202ENST00000405801 PTCD1O75127 700 aaKnown RBP25.04■■□□□ 1.6
FSCN1-202ENST00000405801 LGR6Q9HBX8 967 aa25.04■■□□□ 1.6
FSCN1-202ENST00000405801 FCHSD2O94868 740 aa25.03■■□□□ 1.6
FSCN1-202ENST00000405801 U2AF1L5P0DN76 240 aaPredicted RBP25.03■■□□□ 1.6
FSCN1-202ENST00000405801 U2AF1Q01081 240 aaKnown RBP eCLIP25.03■■□□□ 1.6
FSCN1-202ENST00000405801 TRAPPC3LQ5T215 181 aa25.03■■□□□ 1.6
FSCN1-202ENST00000405801 GAS2L2Q8NHY3 880 aa25.03■■□□□ 1.6
FSCN1-202ENST00000405801 GRIN3BO60391 1043 aa25.02■■□□□ 1.6
FSCN1-202ENST00000405801 ADRA2BP18089 450 aa25.02■■□□□ 1.6
FSCN1-202ENST00000405801 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
FSCN1-202ENST00000405801 SLC52A2Q9HAB3 445 aa25.02■■□□□ 1.6
FSCN1-202ENST00000405801 RPS6KA4O75676 772 aa25.01■■□□□ 1.59
FSCN1-202ENST00000405801 PHACTR3Q96KR7 559 aa25.01■■□□□ 1.59
FSCN1-202ENST00000405801 KIF13BQ9NQT8 1826 aa25■■□□□ 1.59
FSCN1-202ENST00000405801 ARHGEF1Q92888 912 aaKnown RBP25■■□□□ 1.59
FSCN1-202ENST00000405801 MMP10P09238 476 aa24.99■■□□□ 1.59
FSCN1-202ENST00000405801 KIAA1551Q9HCM1 1747 aa24.98■■□□□ 1.59
FSCN1-202ENST00000405801 CRKLP46109 303 aaKnown RBP24.98■■□□□ 1.59
FSCN1-202ENST00000405801 KCPQ6ZWJ8 1503 aa24.97■■□□□ 1.59
FSCN1-202ENST00000405801 GNAT3A8MTJ3 354 aa24.97■■□□□ 1.59
FSCN1-202ENST00000405801 RFC4P35249 363 aa24.96■■□□□ 1.59
FSCN1-202ENST00000405801 NLGN1Q8N2Q7 840 aa24.96■■□□□ 1.59
FSCN1-202ENST00000405801 IL17REQ8NFR9 667 aa24.96■■□□□ 1.59
FSCN1-202ENST00000405801 UBR2Q8IWV8 1755 aa24.95■■□□□ 1.59
FSCN1-202ENST00000405801 GYS1P13807 737 aa24.95■■□□□ 1.58
FSCN1-202ENST00000405801 C10orf71Q711Q0 1435 aa24.95■■□□□ 1.58
FSCN1-202ENST00000405801 ZNF316A6NFI3 1004 aaPredicted RBP24.93■■□□□ 1.58
FSCN1-202ENST00000405801 SLC39A6Q13433 755 aa24.93■■□□□ 1.58
FSCN1-202ENST00000405801 DNAJC10Q8IXB1 793 aa24.93■■□□□ 1.58
FSCN1-202ENST00000405801 PXDNLA1KZ92 1463 aa24.93■■□□□ 1.58
FSCN1-202ENST00000405801 N4BP2Q86UW6 1770 aaPredicted RBP24.93■■□□□ 1.58
FSCN1-202ENST00000405801 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
FSCN1-202ENST00000405801 WWC3Q9ULE0 1092 aa24.92■■□□□ 1.58
FSCN1-202ENST00000405801 SIPA1L3O60292 1781 aaPredicted RBP24.91■■□□□ 1.58
FSCN1-202ENST00000405801 INTS5Q6P9B9 1019 aaKnown RBP24.91■■□□□ 1.58
FSCN1-202ENST00000405801 CEMIPQ8WUJ3 1361 aa24.91■■□□□ 1.58
FSCN1-202ENST00000405801 USP42Q9H9J4 1324 aaKnown RBP24.9■■□□□ 1.58
FSCN1-202ENST00000405801 PLEKHF1Q96S99 279 aa24.89■■□□□ 1.58
FSCN1-202ENST00000405801 CCDC87Q9NVE4 849 aa24.89■■□□□ 1.58
FSCN1-202ENST00000405801 SRP68Q9UHB9 627 aaKnown RBP24.89■■□□□ 1.58
FSCN1-202ENST00000405801 TEFQ10587 303 aa24.88■■□□□ 1.57
FSCN1-202ENST00000405801 PRKRIP1Q9H875 184 aaPredicted RBP24.88■■□□□ 1.57
FSCN1-202ENST00000405801 HTATSF1O43719 755 aaKnown RBP24.87■■□□□ 1.57
FSCN1-202ENST00000405801 CYP19A1P11511 503 aaPredicted RBP24.87■■□□□ 1.57
FSCN1-202ENST00000405801 PARP3Q9Y6F1 533 aa24.87■■□□□ 1.57
FSCN1-202ENST00000405801 SOS1Q07889 1333 aaPredicted RBP24.86■■□□□ 1.57
FSCN1-202ENST00000405801 BRCA1P38398 1863 aaKnown RBP24.86■■□□□ 1.57
FSCN1-202ENST00000405801 PNNQ9H307 717 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms