RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MTHFSP49914 203 aa14.16□□□□□ -0.14
RPAIN-204ENST00000405578 AMIGO3Q86WK7 504 aa14.16□□□□□ -0.14
RPAIN-204ENST00000405578 INSRP06213 1382 aa14.16□□□□□ -0.14
RPAIN-204ENST00000405578 PALLDQ8WX93 1383 aa14.16□□□□□ -0.14
RPAIN-204ENST00000405578 PHF14O94880 888 aa14.15□□□□□ -0.14
RPAIN-204ENST00000405578 HTRA3P83110 453 aa14.15□□□□□ -0.14
RPAIN-204ENST00000405578 HSP90AB2PQ58FF8 381 aa14.15□□□□□ -0.14
RPAIN-204ENST00000405578 PRKRIP1Q9H875 184 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-204ENST00000405578 NMRK2Q9NPI5 230 aa14.15□□□□□ -0.14
RPAIN-204ENST00000405578 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
RPAIN-204ENST00000405578 SMIM5Q71RC9 77 aa14.14□□□□□ -0.15
RPAIN-204ENST00000405578 TNS4Q8IZW8 715 aa14.14□□□□□ -0.15
RPAIN-204ENST00000405578 KLRG1Q96E93 195 aa14.14□□□□□ -0.15
RPAIN-204ENST00000405578 AK7Q96M32 723 aa14.14□□□□□ -0.15
RPAIN-204ENST00000405578 MYBBP1AQ9BQG0 1328 aaKnown RBP14.14□□□□□ -0.15
RPAIN-204ENST00000405578 PXDNLA1KZ92 1463 aa14.13□□□□□ -0.15
RPAIN-204ENST00000405578 ARFGEF1Q9Y6D6 1849 aa14.13□□□□□ -0.15
RPAIN-204ENST00000405578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
RPAIN-204ENST00000405578 PRELPP51888 382 aa14.12□□□□□ -0.15
RPAIN-204ENST00000405578 JMYQ8N9B5 988 aa14.12□□□□□ -0.15
RPAIN-204ENST00000405578 DIAPH1O60610 1272 aaKnown RBP14.11□□□□□ -0.15
RPAIN-204ENST00000405578 HMGB2P26583 209 aaKnown RBP14.11□□□□□ -0.15
RPAIN-204ENST00000405578 RBM46Q8TBY0 533 aaKnown RBP14.11□□□□□ -0.15
RPAIN-204ENST00000405578 ANKRD26Q9UPS8 1709 aa14.11□□□□□ -0.15
RPAIN-204ENST00000405578 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
RPAIN-204ENST00000405578 TNRC6CQ9HCJ0 1690 aaKnown RBP14.1□□□□□ -0.15
RPAIN-204ENST00000405578 EIF4A2Q14240 407 aaKnown RBP14.1□□□□□ -0.15
RPAIN-204ENST00000405578 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
RPAIN-204ENST00000405578 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
RPAIN-204ENST00000405578 USHBP1Q8N6Y0 703 aa14.1□□□□□ -0.15
RPAIN-204ENST00000405578 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
RPAIN-204ENST00000405578 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
RPAIN-204ENST00000405578 NBPF6Q5VWK0 638 aa14.08□□□□□ -0.16
RPAIN-204ENST00000405578 RAPGEF4Q8WZA2 1011 aa14.08□□□□□ -0.16
RPAIN-204ENST00000405578 NBPF4Q96M43 638 aa14.08□□□□□ -0.16
RPAIN-204ENST00000405578 PCDH11XQ9BZA7 1347 aa14.08□□□□□ -0.16
RPAIN-204ENST00000405578 PCDH11YQ9BZA8 1340 aa14.08□□□□□ -0.16
RPAIN-204ENST00000405578 SBF1O95248 1867 aa14.08□□□□□ -0.16
RPAIN-204ENST00000405578 C4AP0C0L4 1744 aa14.07□□□□□ -0.16
RPAIN-204ENST00000405578 KCPQ6ZWJ8 1503 aa14.07□□□□□ -0.16
RPAIN-204ENST00000405578 U2SURPO15042 1029 aaKnown RBP14.07□□□□□ -0.16
RPAIN-204ENST00000405578 SSFA2P28290 1259 aa14.07□□□□□ -0.16
RPAIN-204ENST00000405578 ARHGAP27Q6ZUM4 889 aa14.07□□□□□ -0.16
RPAIN-204ENST00000405578 PCNTO95613 3336 aa14.07□□□□□ -0.16
RPAIN-204ENST00000405578 C10orf71Q711Q0 1435 aa14.07□□□□□ -0.16
RPAIN-204ENST00000405578 MMP10P09238 476 aa14.06□□□□□ -0.16
RPAIN-204ENST00000405578 TATP17735 454 aaPredicted RBP14.06□□□□□ -0.16
RPAIN-204ENST00000405578 IL13P35225 146 aa14.06□□□□□ -0.16
RPAIN-204ENST00000405578 FSTL1Q12841 308 aa14.06□□□□□ -0.16
RPAIN-204ENST00000405578 LINC00116Q8NCU8 138 aa14.06□□□□□ -0.16
RPAIN-204ENST00000405578 SMARCC1Q92922 1105 aaPredicted RBP14.06□□□□□ -0.16
RPAIN-204ENST00000405578 EYA1Q99502 592 aa14.06□□□□□ -0.16
RPAIN-204ENST00000405578 PLEKHG2Q9H7P9 1386 aa14.06□□□□□ -0.16
RPAIN-204ENST00000405578 A0A0G2JLW4 131 aa14.05□□□□□ -0.16
RPAIN-204ENST00000405578 GNPATO15228 680 aa14.04□□□□□ -0.16
RPAIN-204ENST00000405578 C9orf131Q5VYM1 1079 aa14.04□□□□□ -0.16
RPAIN-204ENST00000405578 CYP27B1O15528 508 aa14.03□□□□□ -0.16
RPAIN-204ENST00000405578 FCHSD2O94868 740 aa14.03□□□□□ -0.16
RPAIN-204ENST00000405578 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-204ENST00000405578 TGFB2P61812 414 aa14.03□□□□□ -0.16
RPAIN-204ENST00000405578 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.16
RPAIN-204ENST00000405578 WDR43Q15061 677 aaKnown RBP eCLIP14.03□□□□□ -0.16
RPAIN-204ENST00000405578 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
RPAIN-204ENST00000405578 COL5A3P25940 1745 aaPredicted RBP14.02□□□□□ -0.16
RPAIN-204ENST00000405578 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
RPAIN-204ENST00000405578 NEFMP07197 916 aa14.02□□□□□ -0.17
RPAIN-204ENST00000405578 DPEP1P16444 411 aa14.02□□□□□ -0.17
RPAIN-204ENST00000405578 SIK1P57059 783 aa14.02□□□□□ -0.17
RPAIN-204ENST00000405578 PIGBQ92521 554 aa14.02□□□□□ -0.17
RPAIN-204ENST00000405578 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.17
RPAIN-204ENST00000405578 KDM2BQ8NHM5 1336 aa14.01□□□□□ -0.17
RPAIN-204ENST00000405578 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
RPAIN-204ENST00000405578 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
RPAIN-204ENST00000405578 MRS2Q9HD23 443 aa14.01□□□□□ -0.17
RPAIN-204ENST00000405578 CCDC88AQ3V6T2 1871 aa14□□□□□ -0.17
RPAIN-204ENST00000405578 ITPK1Q13572 414 aa14□□□□□ -0.17
RPAIN-204ENST00000405578 SPG7Q9UQ90 795 aa14□□□□□ -0.17
RPAIN-204ENST00000405578 HMOX1P09601 288 aa13.99□□□□□ -0.17
RPAIN-204ENST00000405578 AMOTQ4VCS5 1084 aa13.99□□□□□ -0.17
RPAIN-204ENST00000405578 RRAGCQ9HB90 399 aa13.99□□□□□ -0.17
RPAIN-204ENST00000405578 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-204ENST00000405578 TIAM2Q8IVF5 1701 aa13.98□□□□□ -0.17
RPAIN-204ENST00000405578 KDRP35968 1356 aa13.98□□□□□ -0.17
RPAIN-204ENST00000405578 PLEKHO1Q53GL0 409 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-204ENST00000405578 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
RPAIN-204ENST00000405578 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
RPAIN-204ENST00000405578 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
RPAIN-204ENST00000405578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.172e-8■□□□□ 9.4
RPAIN-204ENST00000405578 RNF181Q9P0P0 153 aa13.98□□□□□ -0.17
RPAIN-204ENST00000405578 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
RPAIN-204ENST00000405578 ZNF831Q5JPB2 1677 aa13.98□□□□□ -0.17
RPAIN-204ENST00000405578 ATP6V1AP38606 617 aa13.97□□□□□ -0.17
RPAIN-204ENST00000405578 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
RPAIN-204ENST00000405578 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
RPAIN-204ENST00000405578 NLGN1Q8N2Q7 840 aa13.96□□□□□ -0.17
RPAIN-204ENST00000405578 TMOD3Q9NYL9 352 aa13.96□□□□□ -0.17
RPAIN-204ENST00000405578 ASAP1Q9ULH1 1129 aa13.96□□□□□ -0.17
RPAIN-204ENST00000405578 KCNA3P22001 575 aa13.95□□□□□ -0.18
RPAIN-204ENST00000405578 PRKAR2BP31323 418 aa13.95□□□□□ -0.18
RPAIN-204ENST00000405578 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms