RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 ZFYVE27Q5T4F4 411 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 TTC22Q5TAA0 569 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 CCDC8Q9H0W5 538 aaPredicted RBP11.17□□□□□ -0.62
NCOA1-204ENST00000405141 SEC24BO95487 1268 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 DEF6Q9H4E7 631 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 SMTNL1A8MU46 457 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 NUCB1Q02818 461 aa11.17□□□□□ -0.62
NCOA1-204ENST00000405141 ZNHIT6Q9NWK9 470 aaKnown RBP11.17□□□□□ -0.62
NCOA1-204ENST00000405141 PLB1Q6P1J6 1458 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 TRIM22Q8IYM9 498 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 FBLN1P23142 703 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 NUDT16Q96DE0 195 aaKnown RBP11.16□□□□□ -0.62
NCOA1-204ENST00000405141 POLR3GO15318 223 aaPredicted RBP11.16□□□□□ -0.62
NCOA1-204ENST00000405141 ERLIN1O75477 346 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 CASQ1P31415 396 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 STRN4Q9NRL3 753 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 KIF1BPQ96EK5 621 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 MBIPQ9NS73 344 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
NCOA1-204ENST00000405141 MAGI1Q96QZ7 1491 aaPredicted RBP11.16□□□□□ -0.62
NCOA1-204ENST00000405141 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
NCOA1-204ENST00000405141 TATP17735 454 aaPredicted RBP11.15□□□□□ -0.62
NCOA1-204ENST00000405141 BMP2KLQ5H9B9 411 aa11.15□□□□□ -0.62
NCOA1-204ENST00000405141 UBXN4Q92575 508 aa11.15□□□□□ -0.62
NCOA1-204ENST00000405141 KRT18P05783 430 aaKnown RBP11.15□□□□□ -0.62
NCOA1-204ENST00000405141 ZMYND15Q9H091 742 aa11.15□□□□□ -0.62
NCOA1-204ENST00000405141 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
NCOA1-204ENST00000405141 TMCO3Q6UWJ1 677 aa11.15□□□□□ -0.62
NCOA1-204ENST00000405141 RAB11FIP3O75154 756 aa11.15□□□□□ -0.62
NCOA1-204ENST00000405141 HSP90AB3PQ58FF7 597 aa11.15□□□□□ -0.62
NCOA1-204ENST00000405141 KIF14Q15058 1648 aa11.15□□□□□ -0.62
NCOA1-204ENST00000405141 BIVM-ERCC5R4GMW8 1640 aa11.15□□□□□ -0.63
NCOA1-204ENST00000405141 EIF3JO75822 258 aaKnown RBP11.15□□□□□ -0.63
NCOA1-204ENST00000405141 KLHL40Q2TBA0 621 aa11.15□□□□□ -0.63
NCOA1-204ENST00000405141 GIMAP6Q6P9H5 292 aa11.15□□□□□ -0.63
NCOA1-204ENST00000405141 UBE2Q2Q8WVN8 375 aa11.15□□□□□ -0.63
NCOA1-204ENST00000405141 LIMCH1Q9UPQ0 1083 aa11.15□□□□□ -0.63
NCOA1-204ENST00000405141 PLEKHH1Q9ULM0 1364 aa11.15□□□□□ -0.63
NCOA1-204ENST00000405141 KRT32Q14532 448 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 CCDC57Q2TAC2 916 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 PLCD4Q9BRC7 762 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 ZHX3Q9H4I2 956 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 CCT2P78371 535 aaKnown RBP11.14□□□□□ -0.63
NCOA1-204ENST00000405141 CGNQ9P2M7 1197 aaKnown RBP11.14□□□□□ -0.63
NCOA1-204ENST00000405141 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 RPGRIP1LQ68CZ1 1315 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 URI1O94763 535 aaPredicted RBP11.14□□□□□ -0.63
NCOA1-204ENST00000405141 PIP4K2AP48426 406 aaPredicted RBP11.14□□□□□ -0.63
NCOA1-204ENST00000405141 ODF2Q5BJF6 829 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 STX6O43752 255 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 SFPQP23246 707 aaKnown RBP eCLIP11.14□□□□□ -0.63
NCOA1-204ENST00000405141 ISM2Q6H9L7 571 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 C16orf71Q8IYS4 520 aaPredicted RBP11.14□□□□□ -0.63
NCOA1-204ENST00000405141 SLC26A8Q96RN1 970 aa11.14□□□□□ -0.63
NCOA1-204ENST00000405141 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
NCOA1-204ENST00000405141 BIN1O00499 593 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 MYD88Q99836 296 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 TAF7Q15545 349 aaPredicted RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 ABCC11Q96J66 1382 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 EPB41L2O43491 1005 aaKnown RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 GLRX3O76003 335 aaKnown RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 KIAA0754O94854 1291 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 DHX8Q14562 1220 aaKnown RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 TMX3Q96JJ7 454 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 ANO10Q9NW15 660 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 HCLS1P14317 486 aaPredicted RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 CLCN1P35523 988 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 ZFP91Q96JP5 570 aaPredicted RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 CDKL5O76039 1030 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
NCOA1-204ENST00000405141 TDO2P48775 406 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 KLHL10Q6JEL2 608 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
NCOA1-204ENST00000405141 GOLGA6L10A6NI86 522 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 IDH1O75874 414 aaKnown RBP11.12□□□□□ -0.63
NCOA1-204ENST00000405141 TMC6Q7Z403 805 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 KIAA1328Q86T90 577 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 NACAP1Q9BZK3 213 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 KIF18AQ8NI77 898 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 SDSP20132 328 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 SH2B1Q9NRF2 756 aaPredicted RBP11.12□□□□□ -0.63
NCOA1-204ENST00000405141 THOC2Q8NI27 1593 aaKnown RBP11.12□□□□□ -0.63
NCOA1-204ENST00000405141 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
NCOA1-204ENST00000405141 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
NCOA1-204ENST00000405141 STIM1Q13586 685 aa11.11□□□□□ -0.63
NCOA1-204ENST00000405141 NOL7Q9UMY1 257 aaKnown RBP11.11□□□□□ -0.63
NCOA1-204ENST00000405141 HDAC1Q13547 482 aaPredicted RBP11.11□□□□□ -0.63
NCOA1-204ENST00000405141 NECAB1Q8N987 351 aa11.11□□□□□ -0.63
NCOA1-204ENST00000405141 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
NCOA1-204ENST00000405141 NOS1P29475 1434 aa11.11□□□□□ -0.63
NCOA1-204ENST00000405141 RLBP1P12271 317 aa11.11□□□□□ -0.63
NCOA1-204ENST00000405141 MYO6Q9UM54 1294 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms