RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
SMC1B-202ENST00000404354 U2AF2P26368 475 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMC1B-202ENST00000404354 CCDC94Q9BW85 323 aaPredicted RBP11.55□□□□□ -0.56
SMC1B-202ENST00000404354 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
SMC1B-202ENST00000404354 CD163L1Q9NR16 1453 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 CAMSAP1Q5T5Y3 1602 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 AP5Z1O43299 807 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 CWC27Q6UX04 472 aaKnown RBP11.54□□□□□ -0.56
SMC1B-202ENST00000404354 DNM1Q05193 864 aaKnown RBP11.54□□□□□ -0.56
SMC1B-202ENST00000404354 KIF3AQ9Y496 699 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 GNAI2P04899 355 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 MCM5P33992 734 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
SMC1B-202ENST00000404354 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
SMC1B-202ENST00000404354 CCDC83Q8IWF9 413 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 TCEANC2Q96MN5 208 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 BCL2L12Q9HB09 334 aa11.54□□□□□ -0.56
SMC1B-202ENST00000404354 DRC7Q8IY82 874 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 RASEFQ8IZ41 740 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 PUS7Q96PZ0 661 aaKnown RBP11.53□□□□□ -0.56
SMC1B-202ENST00000404354 VWDEQ8N2E2 1590 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 DEPDC5O75140 1603 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 PIBF1Q8WXW3 757 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 MYO3AQ8NEV4 1616 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 LARGE1O95461 756 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 CKAP2LQ8IYA6 745 aa11.53□□□□□ -0.56
SMC1B-202ENST00000404354 KNDC1Q76NI1 1749 aa11.52□□□□□ -0.56
SMC1B-202ENST00000404354 SURF6O75683 361 aaKnown RBP11.52□□□□□ -0.56
SMC1B-202ENST00000404354 PHF14O94880 888 aa11.52□□□□□ -0.56
SMC1B-202ENST00000404354 SYT1P21579 422 aa11.52□□□□□ -0.56
SMC1B-202ENST00000404354 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.56
SMC1B-202ENST00000404354 LTV1Q96GA3 475 aaPredicted RBP11.52□□□□□ -0.56
SMC1B-202ENST00000404354 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
SMC1B-202ENST00000404354 SETBP1Q9Y6X0 1596 aa11.52□□□□□ -0.57
SMC1B-202ENST00000404354 TCHHQ07283 1943 aa11.52□□□□□ -0.57
SMC1B-202ENST00000404354 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
SMC1B-202ENST00000404354 AK2P54819 239 aa11.52□□□□□ -0.57
SMC1B-202ENST00000404354 RTF1Q92541 710 aaKnown RBP11.52□□□□□ -0.57
SMC1B-202ENST00000404354 SMC3Q9UQE7 1217 aa11.52□□□□□ -0.57
SMC1B-202ENST00000404354 CHL1O00533 1208 aa11.52□□□□□ -0.57
SMC1B-202ENST00000404354 ZSCAN20P17040 1043 aaPredicted RBP11.52□□□□□ -0.57
SMC1B-202ENST00000404354 CUL4AQ13619 759 aa11.52□□□□□ -0.57
SMC1B-202ENST00000404354 ZNF592Q92610 1267 aa11.52□□□□□ -0.57
SMC1B-202ENST00000404354 NUDT16Q96DE0 195 aaKnown RBP11.52□□□□□ -0.57
SMC1B-202ENST00000404354 LRMPQ12912 555 aa11.51□□□□□ -0.57
SMC1B-202ENST00000404354 CCDC183Q5T5S1 534 aa11.51□□□□□ -0.57
SMC1B-202ENST00000404354 SMAP1Q8IYB5 467 aaPredicted RBP11.51□□□□□ -0.57
SMC1B-202ENST00000404354 EIF2S2P20042 333 aaKnown RBP11.51□□□□□ -0.57
SMC1B-202ENST00000404354 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
SMC1B-202ENST00000404354 C16orf45Q96MC5 204 aaPredicted RBP11.51□□□□□ -0.57
SMC1B-202ENST00000404354 STK31Q9BXU1 1019 aa11.51□□□□□ -0.57
SMC1B-202ENST00000404354 STX6O43752 255 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 PTGS1P23219 599 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 PDCL2Q8N4E4 241 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 TFIP11Q9UBB9 837 aaKnown RBP11.5□□□□□ -0.57
SMC1B-202ENST00000404354 KDM4AO75164 1064 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 ANXA1P04083 346 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 CASTP20810 708 aaKnown RBP11.5□□□□□ -0.57
SMC1B-202ENST00000404354 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 ABCC3O15438 1527 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 NPHP1O15259 732 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 PPFIA3O75145 1194 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 COL9A3Q14050 684 aaPredicted RBP11.5□□□□□ -0.57
SMC1B-202ENST00000404354 LUZP1Q86V48 1076 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 KCNF1Q9H3M0 494 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 POGZQ7Z3K3 1410 aa11.5□□□□□ -0.57
SMC1B-202ENST00000404354 ZSCAN22P10073 491 aaPredicted RBP11.49□□□□□ -0.57
SMC1B-202ENST00000404354 MCM2P49736 904 aa11.49□□□□□ -0.57
SMC1B-202ENST00000404354 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMC1B-202ENST00000404354 V9GYY5 206 aaPredicted RBP11.49□□□□□ -0.57
SMC1B-202ENST00000404354 IFT172Q9UG01 1749 aa11.49□□□□□ -0.57
SMC1B-202ENST00000404354 ASXL2Q76L83 1435 aa11.49□□□□□ -0.57
SMC1B-202ENST00000404354 ARHGEF40Q8TER5 1519 aa11.49□□□□□ -0.57
SMC1B-202ENST00000404354 FOSBP53539 338 aa11.49□□□□□ -0.57
SMC1B-202ENST00000404354 OS9Q13438 667 aaPredicted RBP11.49□□□□□ -0.57
SMC1B-202ENST00000404354 MTHFSDQ2M296 383 aaKnown RBP11.49□□□□□ -0.57
SMC1B-202ENST00000404354 MTERF4Q7Z6M4 381 aaKnown RBP11.49□□□□□ -0.57
SMC1B-202ENST00000404354 INO80Q9ULG1 1556 aaPredicted RBP11.49□□□□□ -0.57
SMC1B-202ENST00000404354 RUFY3Q7L099 469 aa11.49□□□□□ -0.57
SMC1B-202ENST00000404354 RGS12O14924 1447 aa11.49□□□□□ -0.57
SMC1B-202ENST00000404354 GJB2P29033 226 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 FLIIQ13045 1269 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 PPLO60437 1756 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 CHAF1AQ13111 956 aaPredicted RBP11.48□□□□□ -0.57
SMC1B-202ENST00000404354 STK3Q13188 491 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
SMC1B-202ENST00000404354 ADCK5Q3MIX3 580 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 ZC3H13Q5T200 1668 aaKnown RBP11.48□□□□□ -0.57
SMC1B-202ENST00000404354 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
SMC1B-202ENST00000404354 SNX14Q9Y5W7 946 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 A0A087WWV3 80 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 KCNJ4P48050 445 aa11.48□□□□□ -0.57
SMC1B-202ENST00000404354 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
SMC1B-202ENST00000404354 WASLO00401 505 aaPredicted RBP11.47□□□□□ -0.57
SMC1B-202ENST00000404354 HMGN5P82970 282 aaKnown RBP11.47□□□□□ -0.57
SMC1B-202ENST00000404354 PRPF40BQ6NWY9 871 aaKnown RBP11.47□□□□□ -0.57
SMC1B-202ENST00000404354 JAKMIP1Q96N16 626 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms