RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
KDM5C-205ENST00000404049 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 ZSCAN25Q6NSZ9 544 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 C16orf45Q96MC5 204 aaPredicted RBP17.8■□□□□ 0.44
KDM5C-205ENST00000404049 TRERF1Q96PN7 1200 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 SEPT11Q9NVA2 429 aaKnown RBP17.8■□□□□ 0.44
KDM5C-205ENST00000404049 SPG7Q9UQ90 795 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 ANKRD30BQ9BXX2 1392 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 KIF5CO60282 957 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 UBE2Q2Q8WVN8 375 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 CTNNA3Q9UI47 895 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 HECW1Q76N89 1606 aa17.8■□□□□ 0.44
KDM5C-205ENST00000404049 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
KDM5C-205ENST00000404049 RTEL1-TNFRSF6BF6WH68 1400 aa17.79■□□□□ 0.44
KDM5C-205ENST00000404049 MX1P20591 662 aa17.79■□□□□ 0.44
KDM5C-205ENST00000404049 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
KDM5C-205ENST00000404049 RNF187Q5TA31 235 aaPredicted RBP17.79■□□□□ 0.44
KDM5C-205ENST00000404049 ZNF530Q6P9A1 599 aaPredicted RBP17.79■□□□□ 0.44
KDM5C-205ENST00000404049 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
KDM5C-205ENST00000404049 TRMT1Q9NXH9 659 aaKnown RBP17.79■□□□□ 0.44
KDM5C-205ENST00000404049 EXOC6BQ9Y2D4 811 aa17.79■□□□□ 0.44
KDM5C-205ENST00000404049 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
KDM5C-205ENST00000404049 IBSPP21815 317 aaPredicted RBP17.78■□□□□ 0.44
KDM5C-205ENST00000404049 MCM5P33992 734 aa17.78■□□□□ 0.44
KDM5C-205ENST00000404049 THEMISQ8N1K5 641 aaPredicted RBP17.78■□□□□ 0.44
KDM5C-205ENST00000404049 SCAND2PQ9GZW5 306 aaPredicted RBP17.78■□□□□ 0.44
KDM5C-205ENST00000404049 RPGRIP1LQ68CZ1 1315 aa17.78■□□□□ 0.44
KDM5C-205ENST00000404049 WASF1Q92558 559 aa17.78■□□□□ 0.44
KDM5C-205ENST00000404049 ADCY5O95622 1261 aa17.78■□□□□ 0.44
KDM5C-205ENST00000404049 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
KDM5C-205ENST00000404049 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
KDM5C-205ENST00000404049 ZNF397Q8NF99 534 aaPredicted RBP17.78■□□□□ 0.44
KDM5C-205ENST00000404049 ATAD2Q6PL18 1390 aa17.77■□□□□ 0.44
KDM5C-205ENST00000404049 TOP1P11387 765 aaKnown RBP17.77■□□□□ 0.44
KDM5C-205ENST00000404049 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
KDM5C-205ENST00000404049 DYNC1I1O14576 645 aa17.77■□□□□ 0.44
KDM5C-205ENST00000404049 MYL6BP14649 208 aa17.77■□□□□ 0.44
KDM5C-205ENST00000404049 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.442e-7■■■■□ 19.8
KDM5C-205ENST00000404049 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
KDM5C-205ENST00000404049 TMX1Q9H3N1 280 aa17.77■□□□□ 0.44
KDM5C-205ENST00000404049 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
KDM5C-205ENST00000404049 CEP131Q9UPN4 1083 aa17.77■□□□□ 0.44
KDM5C-205ENST00000404049 POTEB2H3BUK9 544 aa17.77■□□□□ 0.43
KDM5C-205ENST00000404049 KIF4BQ2VIQ3 1234 aa17.77■□□□□ 0.43
KDM5C-205ENST00000404049 CKAP2LQ8IYA6 745 aa17.76■□□□□ 0.43
KDM5C-205ENST00000404049 TROQ12816 1431 aaPredicted RBP17.76■□□□□ 0.43
KDM5C-205ENST00000404049 GCOM1H8Y6P7 765 aaPredicted RBP17.76■□□□□ 0.43
KDM5C-205ENST00000404049 MYZAPP0CAP1 466 aa17.76■□□□□ 0.43
KDM5C-205ENST00000404049 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
KDM5C-205ENST00000404049 FCHSD2O94868 740 aa17.76■□□□□ 0.43
KDM5C-205ENST00000404049 TIGD1Q96MW7 591 aa17.76■□□□□ 0.43
KDM5C-205ENST00000404049 GIGYF2Q6Y7W6 1299 aaKnown RBP17.75■□□□□ 0.43
KDM5C-205ENST00000404049 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
KDM5C-205ENST00000404049 DESP17661 470 aa17.75■□□□□ 0.43
KDM5C-205ENST00000404049 SPA17Q15506 151 aa17.75■□□□□ 0.43
KDM5C-205ENST00000404049 NFE2L2Q16236 605 aa17.75■□□□□ 0.43
KDM5C-205ENST00000404049 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
KDM5C-205ENST00000404049 CCDC175P0C221 793 aa17.75■□□□□ 0.43
KDM5C-205ENST00000404049 UBAC1Q9BSL1 405 aa17.75■□□□□ 0.43
KDM5C-205ENST00000404049 NEMFO60524 1076 aa17.74■□□□□ 0.43
KDM5C-205ENST00000404049 GTF2A1P52655 376 aaPredicted RBP17.74■□□□□ 0.43
KDM5C-205ENST00000404049 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
KDM5C-205ENST00000404049 POLA1P09884 1462 aaPredicted RBP17.74■□□□□ 0.43
KDM5C-205ENST00000404049 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
KDM5C-205ENST00000404049 SSBP05455 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
KDM5C-205ENST00000404049 ATP2B2Q01814 1243 aa17.74■□□□□ 0.43
KDM5C-205ENST00000404049 TDO2P48775 406 aa17.74■□□□□ 0.43
KDM5C-205ENST00000404049 CETN2P41208 172 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 DNAAF4Q8WXU2 420 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
KDM5C-205ENST00000404049 BMP2KQ9NSY1 1161 aaPredicted RBP17.73■□□□□ 0.43
KDM5C-205ENST00000404049 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 DAPK1P53355 1430 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 CTAGE5O15320 804 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 BAG4O95429 457 aaKnown RBP17.73■□□□□ 0.43
KDM5C-205ENST00000404049 CCDC113Q9H0I3 377 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 GDPD2Q9HCC8 539 aa17.73■□□□□ 0.43
KDM5C-205ENST00000404049 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
KDM5C-205ENST00000404049 IFFO1Q0D2I5 559 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 SSH1Q8WYL5 1049 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 TIAM1Q13009 1591 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 MNAT1P51948 309 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 MPHOSPH8Q99549 860 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 RRS1Q15050 365 aaKnown RBP17.72■□□□□ 0.43
KDM5C-205ENST00000404049 KLHL10Q6JEL2 608 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 DDX54Q8TDD1 881 aaKnown RBP17.72■□□□□ 0.43
KDM5C-205ENST00000404049 PRIMPOLQ96LW4 560 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 SPECC1LQ69YQ0 1117 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 PIBF1Q8WXW3 757 aa17.72■□□□□ 0.43
KDM5C-205ENST00000404049 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
KDM5C-205ENST00000404049 GSDMDP57764 484 aa17.71■□□□□ 0.43
KDM5C-205ENST00000404049 IFT140Q96RY7 1462 aa17.71■□□□□ 0.43
KDM5C-205ENST00000404049 UVSSAQ2YD98 709 aa17.71■□□□□ 0.43
KDM5C-205ENST00000404049 CEP135Q66GS9 1140 aa17.71■□□□□ 0.43
KDM5C-205ENST00000404049 TMC6Q7Z403 805 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms