RNA–Protein interactions for RNA: ENST00000403915.5

KCNS3-202, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-202ENST00000403915 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.04□□□□□ -0.64
KCNS3-202ENST00000403915 VIRMAQ69YN4 1812 aaKnown RBP11.04□□□□□ -0.64
KCNS3-202ENST00000403915 NPC1L1Q9UHC9 1359 aa11.04□□□□□ -0.64
KCNS3-202ENST00000403915 MADDQ8WXG6 1647 aa11.04□□□□□ -0.64
KCNS3-202ENST00000403915 KDM2BQ8NHM5 1336 aa11.04□□□□□ -0.64
KCNS3-202ENST00000403915 HELBQ8NG08 1087 aaPredicted RBP11.04□□□□□ -0.64
KCNS3-202ENST00000403915 GBP4Q96PP9 640 aa11.04□□□□□ -0.64
KCNS3-202ENST00000403915 C22orf23Q9BZE7 217 aa11.04□□□□□ -0.64
KCNS3-202ENST00000403915 TBC1D2BQ9UPU7 963 aa11.04□□□□□ -0.64
KCNS3-202ENST00000403915 POGZQ7Z3K3 1410 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 KDM5BQ9UGL1 1544 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 RPS6KA3P51812 740 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 CENPQQ7L2Z9 268 aaPredicted RBP11.03□□□□□ -0.64
KCNS3-202ENST00000403915 MYLK4Q86YV6 388 aaPredicted RBP11.03□□□□□ -0.64
KCNS3-202ENST00000403915 PHC3Q8NDX5 983 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 KIF1BPQ96EK5 621 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 RBSNQ9H1K0 784 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 C21orf2O43822 256 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 ZNF445P59923 1031 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 PUS10Q3MIT2 529 aaKnown RBP11.03□□□□□ -0.64
KCNS3-202ENST00000403915 CCDC125Q86Z20 511 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
KCNS3-202ENST00000403915 SPTLC3Q9NUV7 552 aa11.03□□□□□ -0.64
KCNS3-202ENST00000403915 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
KCNS3-202ENST00000403915 KIF27Q86VH2 1401 aa11.02□□□□□ -0.64
KCNS3-202ENST00000403915 CDC37Q16543 378 aaPredicted RBP11.02□□□□□ -0.65
KCNS3-202ENST00000403915 NCAPG2Q86XI2 1143 aa11.02□□□□□ -0.65
KCNS3-202ENST00000403915 PPM1EQ8WY54 764 aa11.02□□□□□ -0.65
KCNS3-202ENST00000403915 LARP6Q9BRS8 491 aaKnown RBP11.02□□□□□ -0.65
KCNS3-202ENST00000403915 TACO1Q9BSH4 297 aaKnown RBP11.02□□□□□ -0.65
KCNS3-202ENST00000403915 MMTAG2Q9BU76 263 aaKnown RBP11.02□□□□□ -0.65
KCNS3-202ENST00000403915 TMX4Q9H1E5 349 aaPredicted RBP11.02□□□□□ -0.65
KCNS3-202ENST00000403915 PICK1Q9NRD5 415 aa11.02□□□□□ -0.65
KCNS3-202ENST00000403915 PREX1Q8TCU6 1659 aa11.02□□□□□ -0.65
KCNS3-202ENST00000403915 PTPRGP23470 1445 aa11.02□□□□□ -0.65
KCNS3-202ENST00000403915 SYNPO2Q9UMS6 1093 aa11.02□□□□□ -0.65
KCNS3-202ENST00000403915 AP1G2O75843 785 aa11.01□□□□□ -0.65
KCNS3-202ENST00000403915 PDCD2Q16342 344 aaPredicted RBP11.01□□□□□ -0.65
KCNS3-202ENST00000403915 TEX35Q5T0J7 233 aa11.01□□□□□ -0.65
KCNS3-202ENST00000403915 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
KCNS3-202ENST00000403915 TMCO5BA8MYB1 307 aa11.01□□□□□ -0.65
KCNS3-202ENST00000403915 CCDC186Q7Z3E2 898 aa11.01□□□□□ -0.65
KCNS3-202ENST00000403915 RCAN3Q9UKA8 241 aa11.01□□□□□ -0.65
KCNS3-202ENST00000403915 CDKL5O76039 1030 aa11□□□□□ -0.65
KCNS3-202ENST00000403915 SLC5A9Q2M3M2 681 aa11□□□□□ -0.65
KCNS3-202ENST00000403915 C16orf87Q6PH81 154 aa11□□□□□ -0.65
KCNS3-202ENST00000403915 NLRP13Q86W25 1043 aa11□□□□□ -0.65
KCNS3-202ENST00000403915 DRAXINQ8NBI3 349 aaPredicted RBP11□□□□□ -0.65
KCNS3-202ENST00000403915 GIMAP7Q8NHV1 300 aa11□□□□□ -0.65
KCNS3-202ENST00000403915 YIPF2Q9BWQ6 316 aa11□□□□□ -0.65
KCNS3-202ENST00000403915 SCAPERQ9BY12 1400 aa11□□□□□ -0.65
KCNS3-202ENST00000403915 SEC24BO95487 1268 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 OGFOD1Q8N543 542 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 ARL10Q8N8L6 244 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
KCNS3-202ENST00000403915 SPATS2LQ9NUQ6 558 aaKnown RBP10.99□□□□□ -0.65
KCNS3-202ENST00000403915 CWC25Q9NXE8 425 aaPredicted RBP10.99□□□□□ -0.65
KCNS3-202ENST00000403915 IPO5O00410 1097 aaKnown RBP10.99□□□□□ -0.65
KCNS3-202ENST00000403915 FCHSD2O94868 740 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 KIF4AO95239 1232 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 GRIK3Q13003 919 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 HHATQ5VTY9 493 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 TEX11Q8IYF3 940 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 RNF214Q8ND24 703 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 ZNF397Q8NF99 534 aaPredicted RBP10.99□□□□□ -0.65
KCNS3-202ENST00000403915 KCNB2Q92953 911 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 CRACR2AQ9BSW2 395 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
KCNS3-202ENST00000403915 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
KCNS3-202ENST00000403915 IMPDH2P12268 514 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 RBBP5Q15291 538 aaKnown RBP10.98□□□□□ -0.65
KCNS3-202ENST00000403915 KLHL40Q2TBA0 621 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 TTLL5Q6EMB2 1281 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 EFCAB13Q8IY85 973 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 CCDC34Q96HJ3 373 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 NLRP1Q9C000 1473 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 ARID3CA6NKF2 412 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 RBM6P78332 1123 aaKnown RBP10.98□□□□□ -0.65
KCNS3-202ENST00000403915 CCDC178Q5BJE1 867 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
KCNS3-202ENST00000403915 DNAAF4Q8WXU2 420 aa10.98□□□□□ -0.65
KCNS3-202ENST00000403915 TRIM6Q9C030 488 aaPredicted RBP10.98□□□□□ -0.65
KCNS3-202ENST00000403915 ALDH1B1P30837 517 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 IFT88Q13099 833 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 MCM6Q14566 821 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 GOLGA5Q8TBA6 731 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 TTC37Q6PGP7 1564 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 RIMS1Q86UR5 1692 aaKnown RBP10.97□□□□□ -0.65
KCNS3-202ENST00000403915 SNUPNO95149 360 aaKnown RBP10.97□□□□□ -0.65
KCNS3-202ENST00000403915 CCNHP51946 323 aaPredicted RBP10.97□□□□□ -0.65
KCNS3-202ENST00000403915 MNAT1P51948 309 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
KCNS3-202ENST00000403915 IQCGQ9H095 443 aaKnown RBP10.97□□□□□ -0.65
KCNS3-202ENST00000403915 SOS1Q07889 1333 aaPredicted RBP10.97□□□□□ -0.65
KCNS3-202ENST00000403915 MYOM3Q5VTT5 1437 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 CARMIL2Q6F5E8 1435 aa10.97□□□□□ -0.65
KCNS3-202ENST00000403915 GPS2Q13227 327 aa10.96□□□□□ -0.65
KCNS3-202ENST00000403915 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms