RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 MYT1Q01538 1121 aa32.46■■■□□ 2.79
HIST2H3A-201ENST00000403683 NFATC2IPQ8NCF5 419 aa32.46■■■□□ 2.79
HIST2H3A-201ENST00000403683 CANXP27824 592 aaKnown RBP32.45■■■□□ 2.79
HIST2H3A-201ENST00000403683 KRT24Q2M2I5 525 aa32.45■■■□□ 2.79
HIST2H3A-201ENST00000403683 VAMP4O75379 141 aa32.44■■■□□ 2.78
HIST2H3A-201ENST00000403683 SMC4Q9NTJ3 1288 aa32.44■■■□□ 2.78
HIST2H3A-201ENST00000403683 NKX1-1Q15270 411 aaPredicted RBP32.43■■■□□ 2.78
HIST2H3A-201ENST00000403683 ZNF428Q96B54 188 aa32.43■■■□□ 2.78
HIST2H3A-201ENST00000403683 FRAT1Q92837 279 aaPredicted RBP32.41■■■□□ 2.78
HIST2H3A-201ENST00000403683 SSH1Q8WYL5 1049 aa32.4■■■□□ 2.78
HIST2H3A-201ENST00000403683 TRPC5Q9UL62 973 aaPredicted RBP32.4■■■□□ 2.78
HIST2H3A-201ENST00000403683 ERVV-2B6SEH9 535 aa32.4■■■□□ 2.78
HIST2H3A-201ENST00000403683 SCN11AQ9UI33 1791 aa32.39■■■□□ 2.78
HIST2H3A-201ENST00000403683 ALDH1L2Q3SY69 923 aa32.39■■■□□ 2.78
HIST2H3A-201ENST00000403683 VIRMAQ69YN4 1812 aaKnown RBP32.39■■■□□ 2.78
HIST2H3A-201ENST00000403683 TNS2Q63HR2 1409 aa32.38■■■□□ 2.77
HIST2H3A-201ENST00000403683 GJD4Q96KN9 370 aaPredicted RBP32.38■■■□□ 2.77
HIST2H3A-201ENST00000403683 KCNQ3O43525 872 aa32.37■■■□□ 2.77
HIST2H3A-201ENST00000403683 ADAMTS7Q9UKP4 1686 aa32.37■■■□□ 2.77
HIST2H3A-201ENST00000403683 WNK3Q9BYP7 1800 aa32.36■■■□□ 2.77
HIST2H3A-201ENST00000403683 TCERG1O14776 1098 aaKnown RBP32.36■■■□□ 2.77
HIST2H3A-201ENST00000403683 EIF4A1P60842 406 aaKnown RBP32.36■■■□□ 2.77
HIST2H3A-201ENST00000403683 QTRT2Q9H974 415 aaKnown RBP32.36■■■□□ 2.77
HIST2H3A-201ENST00000403683 SHANK3Q9BYB0 1731 aa32.36■■■□□ 2.77
HIST2H3A-201ENST00000403683 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.36■■■□□ 2.77
HIST2H3A-201ENST00000403683 TTC5Q8N0Z6 440 aa32.35■■■□□ 2.77
HIST2H3A-201ENST00000403683 SLC39A6Q13433 755 aa32.34■■■□□ 2.77
HIST2H3A-201ENST00000403683 ZNF790Q6PG37 636 aa32.33■■■□□ 2.77
HIST2H3A-201ENST00000403683 TMOD3Q9NYL9 352 aa32.33■■■□□ 2.77
HIST2H3A-201ENST00000403683 ATRNO75882 1429 aa32.3■■■□□ 2.76
HIST2H3A-201ENST00000403683 SOS1Q07889 1333 aaPredicted RBP32.29■■■□□ 2.76
HIST2H3A-201ENST00000403683 MRC1P22897 1456 aa32.29■■■□□ 2.76
HIST2H3A-201ENST00000403683 MARCH10Q8NA82 808 aaPredicted RBP32.29■■■□□ 2.76
HIST2H3A-201ENST00000403683 SYTL4Q96C24 671 aaPredicted RBP32.29■■■□□ 2.76
HIST2H3A-201ENST00000403683 NECTIN2Q92692 538 aa32.28■■■□□ 2.76
HIST2H3A-201ENST00000403683 SIPA1L3O60292 1781 aaPredicted RBP32.28■■■□□ 2.76
HIST2H3A-201ENST00000403683 KIF16BQ96L93 1317 aa32.28■■■□□ 2.76
HIST2H3A-201ENST00000403683 KDM3BQ7LBC6 1761 aa32.28■■■□□ 2.76
HIST2H3A-201ENST00000403683 ZKSCAN2Q63HK3 967 aa32.27■■■□□ 2.76
HIST2H3A-201ENST00000403683 MRPL50Q8N5N7 158 aaKnown RBP32.27■■■□□ 2.76
HIST2H3A-201ENST00000403683 NOB1Q9ULX3 412 aaKnown RBP32.27■■■□□ 2.76
HIST2H3A-201ENST00000403683 IPO8O15397 1037 aaKnown RBP32.27■■■□□ 2.76
HIST2H3A-201ENST00000403683 CCDC30Q5VVM6 783 aa32.27■■■□□ 2.76
HIST2H3A-201ENST00000403683 STK31Q9BXU1 1019 aa32.27■■■□□ 2.76
HIST2H3A-201ENST00000403683 EIF2S2P20042 333 aaKnown RBP32.26■■■□□ 2.75
HIST2H3A-201ENST00000403683 C20orf194Q5TEA3 1177 aa32.26■■■□□ 2.75
HIST2H3A-201ENST00000403683 CHMP4AQ9BY43 222 aa32.26■■■□□ 2.75
HIST2H3A-201ENST00000403683 HDGFL1Q5TGJ6 251 aa32.24■■■□□ 2.75
HIST2H3A-201ENST00000403683 ZNF772Q68DY9 489 aaPredicted RBP32.24■■■□□ 2.75
HIST2H3A-201ENST00000403683 HOXB7P09629 217 aa32.24■■■□□ 2.75
HIST2H3A-201ENST00000403683 FMNL2Q96PY5 1086 aa32.24■■■□□ 2.75
HIST2H3A-201ENST00000403683 SLC4A2P04920 1241 aa32.23■■■□□ 2.75
HIST2H3A-201ENST00000403683 GIGYF1O75420 1035 aaPredicted RBP32.22■■■□□ 2.75
HIST2H3A-201ENST00000403683 PRIM1P49642 420 aaKnown RBP32.22■■■□□ 2.75
HIST2H3A-201ENST00000403683 BRPF1P55201 1214 aaPredicted RBP32.22■■■□□ 2.75
HIST2H3A-201ENST00000403683 ERICH6BQ5W0A0 696 aa32.22■■■□□ 2.75
HIST2H3A-201ENST00000403683 GLI3P10071 1580 aa32.22■■■□□ 2.75
HIST2H3A-201ENST00000403683 MS4A1P11836 297 aa32.21■■■□□ 2.75
HIST2H3A-201ENST00000403683 PDE3AQ14432 1141 aa32.21■■■□□ 2.75
HIST2H3A-201ENST00000403683 FTSJ3Q8IY81 847 aaKnown RBP32.21■■■□□ 2.75
HIST2H3A-201ENST00000403683 PIGBQ92521 554 aa32.21■■■□□ 2.75
HIST2H3A-201ENST00000403683 CLUAP1Q96AJ1 413 aa32.21■■■□□ 2.75
HIST2H3A-201ENST00000403683 ZNF496Q96IT1 587 aaPredicted RBP32.21■■■□□ 2.75
HIST2H3A-201ENST00000403683 ACSBG1Q96GR2 724 aa32.21■■■□□ 2.75
HIST2H3A-201ENST00000403683 CRBNQ96SW2 442 aa32.2■■■□□ 2.74
HIST2H3A-201ENST00000403683 ATF7IPQ6VMQ6 1270 aa32.19■■■□□ 2.74
HIST2H3A-201ENST00000403683 SEPT12Q8IYM1 358 aa32.19■■■□□ 2.74
HIST2H3A-201ENST00000403683 PANK1Q8TE04 598 aa32.19■■■□□ 2.74
HIST2H3A-201ENST00000403683 KAT6BQ8WYB5 2073 aa32.18■■■□□ 2.74
HIST2H3A-201ENST00000403683 EXOC6Q8TAG9 804 aa32.18■■■□□ 2.74
HIST2H3A-201ENST00000403683 TOGARAM1Q9Y4F4 1720 aa32.18■■■□□ 2.74
HIST2H3A-201ENST00000403683 SNRPA1P09661 255 aaKnown RBP32.18■■■□□ 2.74
HIST2H3A-201ENST00000403683 ONECUT3O60422 494 aaPredicted RBP32.17■■■□□ 2.74
HIST2H3A-201ENST00000403683 PTCD1O75127 700 aaKnown RBP32.17■■■□□ 2.74
HIST2H3A-201ENST00000403683 DZIP1LQ8IYY4 767 aaKnown RBP32.17■■■□□ 2.74
HIST2H3A-201ENST00000403683 PRAMEF22A3QJZ6 481 aa32.16■■■□□ 2.74
HIST2H3A-201ENST00000403683 TRIM27P14373 513 aa32.16■■■□□ 2.74
HIST2H3A-201ENST00000403683 TNNQ9UQP3 1299 aa32.16■■■□□ 2.74
HIST2H3A-201ENST00000403683 HEG1Q9ULI3 1381 aa32.16■■■□□ 2.74
HIST2H3A-201ENST00000403683 ASAP1Q9ULH1 1129 aa32.15■■■□□ 2.74
HIST2H3A-201ENST00000403683 ARHGAP45Q92619 1136 aa32.14■■■□□ 2.74
HIST2H3A-201ENST00000403683 THSD7AQ9UPZ6 1657 aa32.13■■■□□ 2.73
HIST2H3A-201ENST00000403683 BCL9O00512 1426 aa32.13■■■□□ 2.73
HIST2H3A-201ENST00000403683 API5Q9BZZ5 524 aaKnown RBP32.12■■■□□ 2.73
HIST2H3A-201ENST00000403683 ATG3Q9NT62 314 aa32.12■■■□□ 2.73
HIST2H3A-201ENST00000403683 COG6Q9Y2V7 657 aa32.12■■■□□ 2.73
HIST2H3A-201ENST00000403683 RBM6P78332 1123 aaKnown RBP32.11■■■□□ 2.73
HIST2H3A-201ENST00000403683 CHPF2Q9P2E5 772 aa32.11■■■□□ 2.73
HIST2H3A-201ENST00000403683 RBM42Q9BTD8 480 aaKnown RBP32.11■■■□□ 2.73
HIST2H3A-201ENST00000403683 RLBP1P12271 317 aa32.1■■■□□ 2.73
HIST2H3A-201ENST00000403683 PPP4R2Q9NY27 417 aa32.1■■■□□ 2.73
HIST2H3A-201ENST00000403683 FAM182BQ5T319 152 aa32.09■■■□□ 2.73
HIST2H3A-201ENST00000403683 DOT1LQ8TEK3 1739 aa32.09■■■□□ 2.73
HIST2H3A-201ENST00000403683 DBF4Q9UBU7 674 aaPredicted RBP32.09■■■□□ 2.73
HIST2H3A-201ENST00000403683 PTPRCP08575 1304 aa32.09■■■□□ 2.73
HIST2H3A-201ENST00000403683 ITGB4P16144 1822 aa32.09■■■□□ 2.73
HIST2H3A-201ENST00000403683 G2E3Q7L622 706 aa32.08■■■□□ 2.73
HIST2H3A-201ENST00000403683 USP16Q9Y5T5 823 aa32.08■■■□□ 2.73
HIST2H3A-201ENST00000403683 KCNQ2O43526 872 aa32.06■■■□□ 2.72
HIST2H3A-201ENST00000403683 FLIIQ13045 1269 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms