RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 TNS1Q9HBL0 1735 aaKnown RBP17.84■□□□□ 0.45
SNU13-204ENST00000402458 BAG6P46379 1132 aa17.83■□□□□ 0.44
SNU13-204ENST00000402458 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
SNU13-204ENST00000402458 UPF1Q92900 1129 aaKnown RBP eCLIP17.83■□□□□ 0.44
SNU13-204ENST00000402458 SMARCC1Q92922 1105 aaPredicted RBP17.83■□□□□ 0.44
SNU13-204ENST00000402458 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
SNU13-204ENST00000402458 SENP3-EIF4A1A0A087X0R7 540 aa17.82■□□□□ 0.44
SNU13-204ENST00000402458 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
SNU13-204ENST00000402458 BTBD11A6QL63 1104 aa17.81■□□□□ 0.44
SNU13-204ENST00000402458 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
SNU13-204ENST00000402458 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
SNU13-204ENST00000402458 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
SNU13-204ENST00000402458 PLSCR1O15162 318 aa17.79■□□□□ 0.44
SNU13-204ENST00000402458 WWC1Q8IX03 1113 aa17.79■□□□□ 0.44
SNU13-204ENST00000402458 TTC5Q8N0Z6 440 aa17.79■□□□□ 0.44
SNU13-204ENST00000402458 ASAP1Q9ULH1 1129 aa17.79■□□□□ 0.44
SNU13-204ENST00000402458 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
SNU13-204ENST00000402458 BABAM1Q9NWV8 329 aa17.78■□□□□ 0.44
SNU13-204ENST00000402458 LAS1LQ9Y4W2 734 aaKnown RBP17.78■□□□□ 0.44
SNU13-204ENST00000402458 PALLDQ8WX93 1383 aa17.78■□□□□ 0.44
SNU13-204ENST00000402458 HNRNPUQ00839 825 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNU13-204ENST00000402458 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
SNU13-204ENST00000402458 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
SNU13-204ENST00000402458 HMGB2P26583 209 aaKnown RBP17.76■□□□□ 0.43
SNU13-204ENST00000402458 SLC39A6Q13433 755 aa17.76■□□□□ 0.43
SNU13-204ENST00000402458 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
SNU13-204ENST00000402458 TSPYL4Q9UJ04 414 aa17.76■□□□□ 0.43
SNU13-204ENST00000402458 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
SNU13-204ENST00000402458 SOCS7O14512 581 aa17.75■□□□□ 0.43
SNU13-204ENST00000402458 GNAI1P63096 354 aa17.75■□□□□ 0.43
SNU13-204ENST00000402458 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
SNU13-204ENST00000402458 ZNF790Q6PG37 636 aa17.75■□□□□ 0.43
SNU13-204ENST00000402458 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
SNU13-204ENST00000402458 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
SNU13-204ENST00000402458 IL16Q14005 1332 aa17.74■□□□□ 0.43
SNU13-204ENST00000402458 PTCD1O75127 700 aaKnown RBP17.74■□□□□ 0.43
SNU13-204ENST00000402458 SLC27A3Q5K4L6 730 aa17.74■□□□□ 0.43
SNU13-204ENST00000402458 DEFB132Q7Z7B7 95 aa17.74■□□□□ 0.43
SNU13-204ENST00000402458 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
SNU13-204ENST00000402458 MIS18AQ9NYP9 233 aa17.74■□□□□ 0.43
SNU13-204ENST00000402458 LY75O60449 1722 aa17.74■□□□□ 0.43
SNU13-204ENST00000402458 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
SNU13-204ENST00000402458 SIK1P57059 783 aa17.73■□□□□ 0.43
SNU13-204ENST00000402458 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
SNU13-204ENST00000402458 CAMKK2Q96RR4 588 aa17.73■□□□□ 0.43
SNU13-204ENST00000402458 CCNL1Q9UK58 526 aaPredicted RBP17.73■□□□□ 0.43
SNU13-204ENST00000402458 KDM3BQ7LBC6 1761 aa17.72■□□□□ 0.43
SNU13-204ENST00000402458 CHL1O00533 1208 aa17.72■□□□□ 0.43
SNU13-204ENST00000402458 EZH2Q15910 746 aaKnown RBP17.72■□□□□ 0.43
SNU13-204ENST00000402458 TXNRD1Q16881 649 aa17.72■□□□□ 0.43
SNU13-204ENST00000402458 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
SNU13-204ENST00000402458 ATP6V1AP38606 617 aa17.71■□□□□ 0.43
SNU13-204ENST00000402458 GOLGA2Q08379 1002 aa17.7■□□□□ 0.42
SNU13-204ENST00000402458 MYH16Q9H6N6 1097 aa17.7■□□□□ 0.42
SNU13-204ENST00000402458 KCPQ6ZWJ8 1503 aa17.69■□□□□ 0.42
SNU13-204ENST00000402458 KCNQ3O43525 872 aa17.69■□□□□ 0.42
SNU13-204ENST00000402458 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
SNU13-204ENST00000402458 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
SNU13-204ENST00000402458 ZNF496Q96IT1 587 aaPredicted RBP17.69■□□□□ 0.42
SNU13-204ENST00000402458 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
SNU13-204ENST00000402458 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
SNU13-204ENST00000402458 ZNF831Q5JPB2 1677 aa17.68■□□□□ 0.42
SNU13-204ENST00000402458 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
SNU13-204ENST00000402458 RREB1Q92766 1687 aa17.67■□□□□ 0.42
SNU13-204ENST00000402458 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
SNU13-204ENST00000402458 E9PSI1 815 aa17.67■□□□□ 0.42
SNU13-204ENST00000402458 SNRPA1P09661 255 aaKnown RBP17.67■□□□□ 0.42
SNU13-204ENST00000402458 EIF4A1P60842 406 aaKnown RBP17.67■□□□□ 0.42
SNU13-204ENST00000402458 PROM2Q8N271 834 aa17.67■□□□□ 0.42
SNU13-204ENST00000402458 KCNQ4P56696 695 aa17.66■□□□□ 0.42
SNU13-204ENST00000402458 LRRC4BQ9NT99 713 aa17.66■□□□□ 0.42
SNU13-204ENST00000402458 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
SNU13-204ENST00000402458 C5P01031 1676 aa17.65■□□□□ 0.42
SNU13-204ENST00000402458 STARD3NLO95772 234 aa17.65■□□□□ 0.42
SNU13-204ENST00000402458 NBPF14Q5TI25 921 aa17.65■□□□□ 0.42
SNU13-204ENST00000402458 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
SNU13-204ENST00000402458 TAF1LQ8IZX4 1826 aa17.65■□□□□ 0.42
SNU13-204ENST00000402458 NUP188Q5SRE5 1749 aa17.64■□□□□ 0.41
SNU13-204ENST00000402458 ITPK1Q13572 414 aa17.64■□□□□ 0.41
SNU13-204ENST00000402458 DNAJC10Q8IXB1 793 aa17.64■□□□□ 0.41
SNU13-204ENST00000402458 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.41
SNU13-204ENST00000402458 CICQ96RK0 1608 aaPredicted RBP17.64■□□□□ 0.41
SNU13-204ENST00000402458 GIGYF1O75420 1035 aaPredicted RBP17.63■□□□□ 0.41
SNU13-204ENST00000402458 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
SNU13-204ENST00000402458 FANCIQ9NVI1 1328 aa17.63■□□□□ 0.41
SNU13-204ENST00000402458 TJP1Q07157 1748 aa17.63■□□□□ 0.41
SNU13-204ENST00000402458 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
SNU13-204ENST00000402458 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
SNU13-204ENST00000402458 AK7Q96M32 723 aa17.62■□□□□ 0.41
SNU13-204ENST00000402458 CHMP4AQ9BY43 222 aa17.62■□□□□ 0.41
SNU13-204ENST00000402458 STK32BQ9NY57 414 aa17.62■□□□□ 0.41
SNU13-204ENST00000402458 C4BP0C0L5 1744 aa17.61■□□□□ 0.41
SNU13-204ENST00000402458 COL5A3P25940 1745 aaPredicted RBP17.61■□□□□ 0.41
SNU13-204ENST00000402458 HOXB7P09629 217 aa17.61■□□□□ 0.41
SNU13-204ENST00000402458 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
SNU13-204ENST00000402458 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
SNU13-204ENST00000402458 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
SNU13-204ENST00000402458 CYP19A1P11511 503 aaPredicted RBP17.6■□□□□ 0.41
SNU13-204ENST00000402458 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
SNU13-204ENST00000402458 DUSP27Q5VZP5 1158 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms