RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 RRS1Q15050 365 aaKnown RBP23.95■■□□□ 1.42
PDGFA-202ENST00000400761 TNS4Q8IZW8 715 aa23.95■■□□□ 1.42
PDGFA-202ENST00000400761 LINC00116Q8NCU8 138 aa23.95■■□□□ 1.42
PDGFA-202ENST00000400761 MMP10P09238 476 aa23.94■■□□□ 1.42
PDGFA-202ENST00000400761 PRELPP51888 382 aa23.94■■□□□ 1.42
PDGFA-202ENST00000400761 PIGBQ92521 554 aa23.94■■□□□ 1.42
PDGFA-202ENST00000400761 ARHGAP27Q6ZUM4 889 aa23.93■■□□□ 1.42
PDGFA-202ENST00000400761 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
PDGFA-202ENST00000400761 A0A0G2JLW4 131 aa23.92■■□□□ 1.42
PDGFA-202ENST00000400761 SIK1P57059 783 aa23.92■■□□□ 1.42
PDGFA-202ENST00000400761 FSTL1Q12841 308 aa23.92■■□□□ 1.42
PDGFA-202ENST00000400761 C16orf71Q8IYS4 520 aaPredicted RBP23.92■■□□□ 1.42
PDGFA-202ENST00000400761 PANK3Q9H999 370 aa23.92■■□□□ 1.42
PDGFA-202ENST00000400761 PKD1L3Q7Z443 1732 aa23.91■■□□□ 1.42
PDGFA-202ENST00000400761 GNPATO15228 680 aa23.91■■□□□ 1.42
PDGFA-202ENST00000400761 BRCA1P38398 1863 aaKnown RBP23.91■■□□□ 1.42
PDGFA-202ENST00000400761 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
PDGFA-202ENST00000400761 C10orf71Q711Q0 1435 aa23.9■■□□□ 1.42
PDGFA-202ENST00000400761 INSRP06213 1382 aa23.89■■□□□ 1.41
PDGFA-202ENST00000400761 PLEKHG2Q9H7P9 1386 aa23.89■■□□□ 1.41
PDGFA-202ENST00000400761 KIF20BQ96Q89 1820 aa23.89■■□□□ 1.41
PDGFA-202ENST00000400761 ITPK1Q13572 414 aa23.88■■□□□ 1.41
PDGFA-202ENST00000400761 FCHSD2O94868 740 aa23.87■■□□□ 1.41
PDGFA-202ENST00000400761 NKX1-1Q15270 411 aaPredicted RBP23.87■■□□□ 1.41
PDGFA-202ENST00000400761 HSP90AB2PQ58FF8 381 aa23.87■■□□□ 1.41
PDGFA-202ENST00000400761 C9orf131Q5VYM1 1079 aa23.87■■□□□ 1.41
PDGFA-202ENST00000400761 ARFGEF1Q9Y6D6 1849 aa23.87■■□□□ 1.41
PDGFA-202ENST00000400761 DPEP1P16444 411 aa23.86■■□□□ 1.41
PDGFA-202ENST00000400761 KCPQ6ZWJ8 1503 aa23.84■■□□□ 1.41
PDGFA-202ENST00000400761 ATP6V1AP38606 617 aa23.84■■□□□ 1.41
PDGFA-202ENST00000400761 DDX10Q13206 875 aaKnown RBP23.84■■□□□ 1.41
PDGFA-202ENST00000400761 NLGN1Q8N2Q7 840 aa23.84■■□□□ 1.41
PDGFA-202ENST00000400761 KDM2BQ8NHM5 1336 aa23.84■■□□□ 1.41
PDGFA-202ENST00000400761 FLT4P35916 1363 aa23.83■■□□□ 1.41
PDGFA-202ENST00000400761 FYB1O15117 783 aa23.83■■□□□ 1.41
PDGFA-202ENST00000400761 GGNBP2Q9H3C7 697 aa23.83■■□□□ 1.41
PDGFA-202ENST00000400761 CCDC87Q9NVE4 849 aa23.83■■□□□ 1.41
PDGFA-202ENST00000400761 ASAP1Q9ULH1 1129 aa23.83■■□□□ 1.41
PDGFA-202ENST00000400761 C4AP0C0L4 1744 aa23.83■■□□□ 1.41
PDGFA-202ENST00000400761 TMOD3Q9NYL9 352 aa23.82■■□□□ 1.4
PDGFA-202ENST00000400761 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
PDGFA-202ENST00000400761 TNRC6CQ9HCJ0 1690 aaKnown RBP23.81■■□□□ 1.4
PDGFA-202ENST00000400761 TRAPPC3LQ5T215 181 aa23.81■■□□□ 1.4
PDGFA-202ENST00000400761 KCNA3P22001 575 aa23.8■■□□□ 1.4
PDGFA-202ENST00000400761 RRAGCQ9HB90 399 aa23.8■■□□□ 1.4
PDGFA-202ENST00000400761 NCAPD2Q15021 1401 aa23.79■■□□□ 1.4
PDGFA-202ENST00000400761 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
PDGFA-202ENST00000400761 RTCBQ9Y3I0 505 aaKnown RBP23.79■■□□□ 1.4
PDGFA-202ENST00000400761 ANKRD26Q9UPS8 1709 aa23.79■■□□□ 1.4
PDGFA-202ENST00000400761 KNSTRNQ9Y448 316 aa23.78■■□□□ 1.4
PDGFA-202ENST00000400761 SBF1O95248 1867 aa23.77■■□□□ 1.4
PDGFA-202ENST00000400761 PER1O15534 1290 aaPredicted RBP23.77■■□□□ 1.4
PDGFA-202ENST00000400761 GYS1P13807 737 aa23.77■■□□□ 1.4
PDGFA-202ENST00000400761 SMC1BQ8NDV3 1235 aa23.77■■□□□ 1.4
PDGFA-202ENST00000400761 DCAF5Q96JK2 942 aa23.77■■□□□ 1.4
PDGFA-202ENST00000400761 ATG3Q9NT62 314 aa23.77■■□□□ 1.4
PDGFA-202ENST00000400761 RNF181Q9P0P0 153 aa23.77■■□□□ 1.4
PDGFA-202ENST00000400761 PARP3Q9Y6F1 533 aa23.77■■□□□ 1.4
PDGFA-202ENST00000400761 ARHGEF1Q92888 912 aaKnown RBP23.76■■□□□ 1.39
PDGFA-202ENST00000400761 PIM2Q9P1W9 311 aa23.76■■□□□ 1.39
PDGFA-202ENST00000400761 KDRP35968 1356 aa23.76■■□□□ 1.39
PDGFA-202ENST00000400761 HSPA1AP0DMV8 641 aaKnown RBP23.75■■□□□ 1.39
PDGFA-202ENST00000400761 HSPA1BP0DMV9 641 aaKnown RBP23.75■■□□□ 1.39
PDGFA-202ENST00000400761 ADRA2BP18089 450 aa23.75■■□□□ 1.39
PDGFA-202ENST00000400761 ZNF831Q5JPB2 1677 aa23.74■■□□□ 1.39
PDGFA-202ENST00000400761 DALRD3Q5D0E6 543 aaKnown RBP23.73■■□□□ 1.39
PDGFA-202ENST00000400761 RC3H1Q5TC82 1133 aaKnown RBP23.73■■□□□ 1.39
PDGFA-202ENST00000400761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.73■■□□□ 1.39
PDGFA-202ENST00000400761 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
PDGFA-202ENST00000400761 AMER1Q5JTC6 1135 aaPredicted RBP23.72■■□□□ 1.39
PDGFA-202ENST00000400761 SLC4A9Q96Q91 983 aa23.72■■□□□ 1.39
PDGFA-202ENST00000400761 PHKG2P15735 406 aa23.71■■□□□ 1.39
PDGFA-202ENST00000400761 RFC4P35249 363 aa23.71■■□□□ 1.39
PDGFA-202ENST00000400761 CNGB1Q14028 1251 aaPredicted RBP23.71■■□□□ 1.39
PDGFA-202ENST00000400761 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
PDGFA-202ENST00000400761 CNTNAP4Q9C0A0 1308 aa23.7■■□□□ 1.38
PDGFA-202ENST00000400761 EMILIN1Q9Y6C2 1016 aa23.7■■□□□ 1.38
PDGFA-202ENST00000400761 MYH14Q7Z406 1995 aaKnown RBP23.69■■□□□ 1.38
PDGFA-202ENST00000400761 RPS6KA4O75676 772 aa23.69■■□□□ 1.38
PDGFA-202ENST00000400761 CC2D1BQ5T0F9 858 aaKnown RBP23.69■■□□□ 1.38
PDGFA-202ENST00000400761 RBM42Q9BTD8 480 aaKnown RBP23.67■■□□□ 1.38
PDGFA-202ENST00000400761 ZC3H4Q9UPT8 1303 aaKnown RBP23.66■■□□□ 1.38
PDGFA-202ENST00000400761 EYA1Q99502 592 aa23.66■■□□□ 1.38
PDGFA-202ENST00000400761 NPC1L1Q9UHC9 1359 aa23.65■■□□□ 1.38
PDGFA-202ENST00000400761 CHRNA5P30532 468 aa23.64■■□□□ 1.37
PDGFA-202ENST00000400761 KDM6AO15550 1401 aaPredicted RBP23.63■■□□□ 1.37
PDGFA-202ENST00000400761 VEGFAP15692 232 aaPredicted RBP23.63■■□□□ 1.37
PDGFA-202ENST00000400761 DDR1Q08345 913 aa23.63■■□□□ 1.37
PDGFA-202ENST00000400761 MORC1Q86VD1 984 aa23.63■■□□□ 1.37
PDGFA-202ENST00000400761 PPM1GO15355 546 aaPredicted RBP23.62■■□□□ 1.37
PDGFA-202ENST00000400761 TNNT2P45379 298 aaPredicted RBP23.62■■□□□ 1.37
PDGFA-202ENST00000400761 GLTPD2A6NH11 291 aa23.61■■□□□ 1.37
PDGFA-202ENST00000400761 ERVV-2B6SEH9 535 aa23.61■■□□□ 1.37
PDGFA-202ENST00000400761 RASSF7Q02833 373 aa23.61■■□□□ 1.37
PDGFA-202ENST00000400761 FKBP8Q14318 412 aa23.61■■□□□ 1.37
PDGFA-202ENST00000400761 SRP68Q9UHB9 627 aaKnown RBP23.61■■□□□ 1.37
PDGFA-202ENST00000400761 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
PDGFA-202ENST00000400761 SLC34A2O95436 690 aa23.57■■□□□ 1.36
PDGFA-202ENST00000400761 LMNB1P20700 586 aa23.57■■□□□ 1.36
PDGFA-202ENST00000400761 CCDC88AQ3V6T2 1871 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms