RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 PSME1Q06323 249 aa9.08□□□□□ -0.96
SAMSN1-202ENST00000400564 LYSMD3Q7Z3D4 306 aa9.08□□□□□ -0.96
SAMSN1-202ENST00000400564 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
SAMSN1-202ENST00000400564 INHAP05111 366 aa9.07□□□□□ -0.96
SAMSN1-202ENST00000400564 RFX1P22670 979 aa9.07□□□□□ -0.96
SAMSN1-202ENST00000400564 GPC1P35052 558 aa9.07□□□□□ -0.96
SAMSN1-202ENST00000400564 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
SAMSN1-202ENST00000400564 GRIP2Q9C0E4 1043 aa9.07□□□□□ -0.96
SAMSN1-202ENST00000400564 SERTAD1Q9UHV2 236 aa9.07□□□□□ -0.96
SAMSN1-202ENST00000400564 RNF225M0QZC1 329 aaPredicted RBP9.06□□□□□ -0.96
SAMSN1-202ENST00000400564 ZBTB7BO15156 539 aaPredicted RBP9.06□□□□□ -0.96
SAMSN1-202ENST00000400564 PTSQ03393 145 aa9.06□□□□□ -0.96
SAMSN1-202ENST00000400564 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
SAMSN1-202ENST00000400564 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
SAMSN1-202ENST00000400564 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
SAMSN1-202ENST00000400564 FHDC1Q9C0D6 1143 aaPredicted RBP9.06□□□□□ -0.96
SAMSN1-202ENST00000400564 POU4F2Q12837 409 aa9.05□□□□□ -0.96
SAMSN1-202ENST00000400564 CDCA8Q53HL2 280 aa9.05□□□□□ -0.96
SAMSN1-202ENST00000400564 KANK4Q5T7N3 995 aaPredicted RBP9.05□□□□□ -0.96
SAMSN1-202ENST00000400564 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
SAMSN1-202ENST00000400564 ZNF594Q96JF6 807 aaPredicted RBP9.05□□□□□ -0.96
SAMSN1-202ENST00000400564 DNAAF2Q9NVR5 837 aaKnown RBP9.05□□□□□ -0.96
SAMSN1-202ENST00000400564 TLR1Q15399 786 aa9.04□□□□□ -0.96
SAMSN1-202ENST00000400564 TMEM151AQ8N4L1 468 aa9.04□□□□□ -0.96
SAMSN1-202ENST00000400564 TPCN2Q8NHX9 752 aa9.04□□□□□ -0.96
SAMSN1-202ENST00000400564 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
SAMSN1-202ENST00000400564 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
SAMSN1-202ENST00000400564 RASA1P20936 1047 aa9.03□□□□□ -0.96
SAMSN1-202ENST00000400564 ATP1A2P50993 1020 aa9.03□□□□□ -0.96
SAMSN1-202ENST00000400564 CRTC2Q53ET0 693 aaPredicted RBP9.03□□□□□ -0.96
SAMSN1-202ENST00000400564 CCDC102BQ68D86 513 aa9.03□□□□□ -0.96
SAMSN1-202ENST00000400564 ZNF358Q9NW07 568 aa9.03□□□□□ -0.96
SAMSN1-202ENST00000400564 SLC35F4A4IF30 521 aa9.02□□□□□ -0.97
SAMSN1-202ENST00000400564 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
SAMSN1-202ENST00000400564 CCDC82Q8N4S0 544 aa9.02□□□□□ -0.97
SAMSN1-202ENST00000400564 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
SAMSN1-202ENST00000400564 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 DKK1O94907 266 aa9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 PHKA2P46019 1235 aa9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 SMTNP53814 917 aa9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 CCDC155Q8N6L0 562 aa9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 CCDC97Q96F63 343 aaPredicted RBP9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 VRTNQ9H8Y1 702 aa9.01□□□□□ -0.97
SAMSN1-202ENST00000400564 SFI1A8K8P3 1242 aa9□□□□□ -0.97
SAMSN1-202ENST00000400564 SPATA31C2B4DYI2 1134 aa9□□□□□ -0.97
SAMSN1-202ENST00000400564 TMEM214Q6NUQ4 689 aaKnown RBP9□□□□□ -0.97
SAMSN1-202ENST00000400564 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
SAMSN1-202ENST00000400564 LARGE2Q8N3Y3 721 aa9□□□□□ -0.97
SAMSN1-202ENST00000400564 NBPF15Q8N660 670 aa9□□□□□ -0.97
SAMSN1-202ENST00000400564 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 A6NJY4 79 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L15C9J2P7 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L10C9JJH3 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L13C9JLJ4 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L12C9JPN9 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L11C9JVI0 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L21D6R901 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L18D6R9N7 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L22D6RA61 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L17D6RBQ6 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L19D6RCP7 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L20D6RJB6 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 GDF11O95390 407 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 USP17L24Q0WX57 530 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 PTK7Q13308 1070 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 SIX5Q8N196 739 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 SLC4A9Q96Q91 983 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 MTFR1Q15390 333 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 C4orf17Q53FE4 359 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 LARP1Q6PKG0 1096 aaKnown RBP8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 TAS1R3Q7RTX0 852 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 TNS4Q8IZW8 715 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 SERPINA10Q9UK55 444 aa8.99□□□□□ -0.97
SAMSN1-202ENST00000400564 GSK3AP49840 483 aa8.98□□□□□ -0.97
SAMSN1-202ENST00000400564 TBCELQ5QJ74 424 aa8.98□□□□□ -0.97
SAMSN1-202ENST00000400564 ERICH6Q7L0X2 663 aa8.98□□□□□ -0.97
SAMSN1-202ENST00000400564 PPARGC1BQ86YN6 1023 aaKnown RBP8.98□□□□□ -0.97
SAMSN1-202ENST00000400564 RHBDD1Q8TEB9 315 aa8.98□□□□□ -0.97
SAMSN1-202ENST00000400564 CUEDC1Q9NWM3 386 aaPredicted RBP8.98□□□□□ -0.97
SAMSN1-202ENST00000400564 IQSEC3Q9UPP2 1182 aaPredicted RBP8.98□□□□□ -0.97
SAMSN1-202ENST00000400564 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 BACH1O14867 736 aa8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 LGR5O75473 907 aa8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 EPHA4P54764 986 aa8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 SRPK2P78362 688 aaKnown RBP8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 RASSF7Q02833 373 aa8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 DPYDQ12882 1025 aa8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 GNASQ5JWF2 1037 aa8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 TSEN2Q8NCE0 465 aaKnown RBP8.97□□□□□ -0.97
SAMSN1-202ENST00000400564 ITGA6P23229 1130 aa8.96□□□□□ -0.98
SAMSN1-202ENST00000400564 GTF2E1P29083 439 aaPredicted RBP8.96□□□□□ -0.98
SAMSN1-202ENST00000400564 ZNF295-AS1Q8N0V1 137 aa8.96□□□□□ -0.98
SAMSN1-202ENST00000400564 GAS2L1Q99501 681 aaPredicted RBP8.96□□□□□ -0.98
SAMSN1-202ENST00000400564 TIMMDC1Q9NPL8 285 aa8.96□□□□□ -0.98
SAMSN1-202ENST00000400564 PLA2G4AP47712 749 aa8.95□□□□□ -0.98
SAMSN1-202ENST00000400564 ANKMY2Q8IV38 441 aa8.95□□□□□ -0.98
SAMSN1-202ENST00000400564 ARXQ96QS3 562 aa8.95□□□□□ -0.98
SAMSN1-202ENST00000400564 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
SAMSN1-202ENST00000400564 SEC13P55735 322 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms