RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 QTRT2Q9H974 415 aaKnown RBP8.91□□□□□ -0.98
USP16-203ENST00000399975 SLC52A2Q9HAB3 445 aa8.91□□□□□ -0.98
USP16-203ENST00000399975 LGR6Q9HBX8 967 aa8.91□□□□□ -0.98
USP16-203ENST00000399975 DDB1Q16531 1140 aa8.9□□□□□ -0.98
USP16-203ENST00000399975 CACNA1FO60840 1977 aa8.9□□□□□ -0.99
USP16-203ENST00000399975 DCTN1Q14203 1278 aa8.9□□□□□ -0.99
USP16-203ENST00000399975 MBIPQ9NS73 344 aa8.9□□□□□ -0.99
USP16-203ENST00000399975 RBM6P78332 1123 aaKnown RBP8.89□□□□□ -0.99
USP16-203ENST00000399975 MPRIPQ6WCQ1 1025 aa8.89□□□□□ -0.99
USP16-203ENST00000399975 THUMPD2Q9BTF0 503 aaKnown RBP8.89□□□□□ -0.99
USP16-203ENST00000399975 RNF123Q5XPI4 1314 aa8.89□□□□□ -0.99
USP16-203ENST00000399975 USP35Q9P2H5 1018 aa8.89□□□□□ -0.99
USP16-203ENST00000399975 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
USP16-203ENST00000399975 KCPQ6ZWJ8 1503 aa8.89□□□□□ -0.99
USP16-203ENST00000399975 HOXB7P09629 217 aa8.88□□□□□ -0.99
USP16-203ENST00000399975 FAM98CQ17RN3 349 aaKnown RBP8.88□□□□□ -0.99
USP16-203ENST00000399975 BRPF1P55201 1214 aaPredicted RBP8.88□□□□□ -0.99
USP16-203ENST00000399975 MARCH10Q8NA82 808 aaPredicted RBP8.88□□□□□ -0.99
USP16-203ENST00000399975 TEFQ10587 303 aa8.88□□□□□ -0.99
USP16-203ENST00000399975 RGS17Q9UGC6 210 aaPredicted RBP8.88□□□□□ -0.99
USP16-203ENST00000399975 C5P01031 1676 aa8.87□□□□□ -0.99
USP16-203ENST00000399975 SENP3-EIF4A1A0A087X0R7 540 aa8.87□□□□□ -0.99
USP16-203ENST00000399975 TSPYL4Q9UJ04 414 aa8.87□□□□□ -0.99
USP16-203ENST00000399975 RREB1Q92766 1687 aa8.87□□□□□ -0.99
USP16-203ENST00000399975 BTBD11A6QL63 1104 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 CABP4P57796 275 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
USP16-203ENST00000399975 ALDH1L2Q3SY69 923 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 DDX54Q8TDD1 881 aaKnown RBP8.86□□□□□ -0.99
USP16-203ENST00000399975 CHMP4AQ9BY43 222 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 LY75O60449 1722 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 RGPD3A6NKT7 1758 aaPredicted RBP8.86□□□□□ -0.99
USP16-203ENST00000399975 RGPD4Q7Z3J3 1758 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 EXOSC9Q06265 439 aaKnown RBP8.86□□□□□ -0.99
USP16-203ENST00000399975 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 TSR2Q969E8 191 aaKnown RBP8.86□□□□□ -0.99
USP16-203ENST00000399975 BTAF1O14981 1849 aa8.86□□□□□ -0.99
USP16-203ENST00000399975 VAMP4O75379 141 aa8.85□□□□□ -0.99
USP16-203ENST00000399975 TJP1Q07157 1748 aa8.85□□□□□ -0.99
USP16-203ENST00000399975 RCAN3Q9UKA8 241 aa8.85□□□□□ -0.99
USP16-203ENST00000399975 N4BP2Q86UW6 1770 aaPredicted RBP8.85□□□□□ -0.99
USP16-203ENST00000399975 RGS12O14924 1447 aa8.85□□□□□ -0.99
USP16-203ENST00000399975 RXRBP28702 533 aa8.85□□□□□ -0.99
USP16-203ENST00000399975 ZNF790Q6PG37 636 aa8.85□□□□□ -0.99
USP16-203ENST00000399975 NFATC2IPQ8NCF5 419 aa8.85□□□□□ -0.99
USP16-203ENST00000399975 TMOD3Q9NYL9 352 aa8.84□□□□□ -0.99
USP16-203ENST00000399975 COL5A3P25940 1745 aaPredicted RBP8.84□□□□□ -0.99
USP16-203ENST00000399975 RARSP54136 660 aaKnown RBP8.84□□□□□ -0.99
USP16-203ENST00000399975 ILDR1Q86SU0 546 aaPredicted RBP8.84□□□□□ -0.99
USP16-203ENST00000399975 VSIG10Q8N0Z9 540 aa8.84□□□□□ -0.99
USP16-203ENST00000399975 C8orf58Q8NAV2 365 aa8.84□□□□□ -0.99
USP16-203ENST00000399975 LAS1LQ9Y4W2 734 aaKnown RBP8.84□□□□□ -0.99
USP16-203ENST00000399975 TWISTNBQ3B726 338 aaPredicted RBP8.83□□□□□ -1
USP16-203ENST00000399975 PIGBQ92521 554 aa8.83□□□□□ -1
USP16-203ENST00000399975 TNS1Q9HBL0 1735 aaKnown RBP8.83□□□□□ -1
USP16-203ENST00000399975 POTEAQ6S8J7 498 aa8.82□□□□□ -1
USP16-203ENST00000399975 KRT27Q7Z3Y8 459 aa8.82□□□□□ -1
USP16-203ENST00000399975 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
USP16-203ENST00000399975 GIGYF1O75420 1035 aaPredicted RBP8.82□□□□□ -1
USP16-203ENST00000399975 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
USP16-203ENST00000399975 TSPYL6Q8N831 410 aa8.82□□□□□ -1
USP16-203ENST00000399975 FMNL2Q96PY5 1086 aa8.82□□□□□ -1
USP16-203ENST00000399975 ATG3Q9NT62 314 aa8.82□□□□□ -1
USP16-203ENST00000399975 MIS18AQ9NYP9 233 aa8.82□□□□□ -1
USP16-203ENST00000399975 ERBB4Q15303 1308 aa8.82□□□□□ -1
USP16-203ENST00000399975 KCNQ3O43525 872 aa8.82□□□□□ -1
USP16-203ENST00000399975 SMARCC1Q92922 1105 aaPredicted RBP8.82□□□□□ -1
USP16-203ENST00000399975 PRIM1P49642 420 aaKnown RBP8.81□□□□□ -1
USP16-203ENST00000399975 MRPL50Q8N5N7 158 aaKnown RBP8.81□□□□□ -1
USP16-203ENST00000399975 ARHGAP45Q92619 1136 aa8.81□□□□□ -1
USP16-203ENST00000399975 SNRPA1P09661 255 aaKnown RBP8.81□□□□□ -1
USP16-203ENST00000399975 TTC5Q8N0Z6 440 aa8.81□□□□□ -1
USP16-203ENST00000399975 TEX13AQ9BXU3 409 aaPredicted RBP8.81□□□□□ -1
USP16-203ENST00000399975 TAF1LQ8IZX4 1826 aa8.81□□□□□ -1
USP16-203ENST00000399975 CCDC30Q5VVM6 783 aa8.8□□□□□ -1
USP16-203ENST00000399975 BCL11BQ9C0K0 894 aaPredicted RBP8.8□□□□□ -1
USP16-203ENST00000399975 RRP1P56182 461 aaKnown RBP8.8□□□□□ -1
USP16-203ENST00000399975 SSH1Q8WYL5 1049 aa8.8□□□□□ -1
USP16-203ENST00000399975 ZNF496Q96IT1 587 aaPredicted RBP8.8□□□□□ -1
USP16-203ENST00000399975 IBTKQ9P2D0 1353 aaPredicted RBP8.8□□□□□ -1
USP16-203ENST00000399975 KIF16BQ96L93 1317 aa8.8□□□□□ -1
USP16-203ENST00000399975 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.79□□□□□ -1
USP16-203ENST00000399975 SLC39A6Q13433 755 aa8.79□□□□□ -1
USP16-203ENST00000399975 KRT24Q2M2I5 525 aa8.79□□□□□ -1
USP16-203ENST00000399975 HMGB2P26583 209 aaKnown RBP8.79□□□□□ -1
USP16-203ENST00000399975 ASAP1Q9ULH1 1129 aa8.79□□□□□ -1
USP16-203ENST00000399975 PTPRCP08575 1304 aa8.78□□□□□ -1
USP16-203ENST00000399975 PXDNLA1KZ92 1463 aa8.78□□□□□ -1
USP16-203ENST00000399975 ERICH6BQ5W0A0 696 aa8.78□□□□□ -1
USP16-203ENST00000399975 NUP188Q5SRE5 1749 aa8.78□□□□□ -1
USP16-203ENST00000399975 PALLDQ8WX93 1383 aa8.78□□□□□ -1
USP16-203ENST00000399975 MS4A1P11836 297 aa8.78□□□□□ -1
USP16-203ENST00000399975 PDE3AQ14432 1141 aa8.78□□□□□ -1
USP16-203ENST00000399975 A0A0G2JS52 829 aa8.77□□□□□ -1.01
USP16-203ENST00000399975 IPO8O15397 1037 aaKnown RBP8.77□□□□□ -1.01
USP16-203ENST00000399975 BCAR3O75815 825 aa8.77□□□□□ -1.01
USP16-203ENST00000399975 SMC4Q9NTJ3 1288 aa8.77□□□□□ -1.01
USP16-203ENST00000399975 PDIA6Q15084 440 aa8.77□□□□□ -1.01
USP16-203ENST00000399975 HDGFL1Q5TGJ6 251 aa8.77□□□□□ -1.01
USP16-203ENST00000399975 ACSBG1Q96GR2 724 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms