RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 TGFB2P61812 414 aa21.05■□□□□ 0.96
IFITM3-201ENST00000399808 NMRK2Q9NPI5 230 aa21.05■□□□□ 0.96
IFITM3-201ENST00000399808 ATG3Q9NT62 314 aa21.05■□□□□ 0.96
IFITM3-201ENST00000399808 TMOD3Q9NYL9 352 aa21.05■□□□□ 0.96
IFITM3-201ENST00000399808 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
IFITM3-201ENST00000399808 BCS1LQ9Y276 419 aa21.05■□□□□ 0.96
IFITM3-201ENST00000399808 CARD14Q9BXL6 1004 aa21.04■□□□□ 0.96
IFITM3-201ENST00000399808 ARFGEF1Q9Y6D6 1849 aa21.03■□□□□ 0.96
IFITM3-201ENST00000399808 MYH14Q7Z406 1995 aaKnown RBP21.03■□□□□ 0.96
IFITM3-201ENST00000399808 ARHGAP27Q6ZUM4 889 aa21.02■□□□□ 0.96
IFITM3-201ENST00000399808 SLC4A9Q96Q91 983 aa21.02■□□□□ 0.96
IFITM3-201ENST00000399808 EYA1Q99502 592 aa21.02■□□□□ 0.96
IFITM3-201ENST00000399808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.02■□□□□ 0.96
IFITM3-201ENST00000399808 C10orf71Q711Q0 1435 aa21.02■□□□□ 0.96
IFITM3-201ENST00000399808 COL5A3P25940 1745 aaPredicted RBP21.01■□□□□ 0.95
IFITM3-201ENST00000399808 PHKG2P15735 406 aa21.01■□□□□ 0.95
IFITM3-201ENST00000399808 TMF1P82094 1093 aa21.01■□□□□ 0.95
IFITM3-201ENST00000399808 ZNF831Q5JPB2 1677 aa21.01■□□□□ 0.95
IFITM3-201ENST00000399808 C4AP0C0L4 1744 aa21.01■□□□□ 0.95
IFITM3-201ENST00000399808 DPEP1P16444 411 aa21■□□□□ 0.95
IFITM3-201ENST00000399808 NLGN1Q8N2Q7 840 aa21■□□□□ 0.95
IFITM3-201ENST00000399808 KDRP35968 1356 aa20.99■□□□□ 0.95
IFITM3-201ENST00000399808 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
IFITM3-201ENST00000399808 KCNA3P22001 575 aa20.99■□□□□ 0.95
IFITM3-201ENST00000399808 TRAPPC3LQ5T215 181 aa20.99■□□□□ 0.95
IFITM3-201ENST00000399808 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
IFITM3-201ENST00000399808 ARHGEF1Q92888 912 aaKnown RBP20.99■□□□□ 0.95
IFITM3-201ENST00000399808 WASHC2AQ641Q2 1341 aa20.99■□□□□ 0.95
IFITM3-201ENST00000399808 SBF1O95248 1867 aa20.98■□□□□ 0.95
IFITM3-201ENST00000399808 HTRA3P83110 453 aa20.98■□□□□ 0.95
IFITM3-201ENST00000399808 RTCBQ9Y3I0 505 aaKnown RBP20.98■□□□□ 0.95
IFITM3-201ENST00000399808 FCHSD2O94868 740 aa20.97■□□□□ 0.95
IFITM3-201ENST00000399808 GYS1P13807 737 aa20.97■□□□□ 0.95
IFITM3-201ENST00000399808 RBM46Q8TBY0 533 aaKnown RBP20.97■□□□□ 0.95
IFITM3-201ENST00000399808 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
IFITM3-201ENST00000399808 C9orf131Q5VYM1 1079 aa20.95■□□□□ 0.94
IFITM3-201ENST00000399808 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
IFITM3-201ENST00000399808 COL13A1Q5TAT6 717 aaPredicted RBP20.94■□□□□ 0.94
IFITM3-201ENST00000399808 JMYQ8N9B5 988 aa20.94■□□□□ 0.94
IFITM3-201ENST00000399808 RPS6KA4O75676 772 aa20.93■□□□□ 0.94
IFITM3-201ENST00000399808 KLRG1Q96E93 195 aa20.93■□□□□ 0.94
IFITM3-201ENST00000399808 RBM42Q9BTD8 480 aaKnown RBP20.93■□□□□ 0.94
IFITM3-201ENST00000399808 POLKQ9UBT6 870 aa20.93■□□□□ 0.94
IFITM3-201ENST00000399808 ADRA2BP18089 450 aa20.92■□□□□ 0.94
IFITM3-201ENST00000399808 PARP3Q9Y6F1 533 aa20.92■□□□□ 0.94
IFITM3-201ENST00000399808 RFC4P35249 363 aa20.91■□□□□ 0.94
IFITM3-201ENST00000399808 KCPQ6ZWJ8 1503 aa20.91■□□□□ 0.94
IFITM3-201ENST00000399808 CNTNAP4Q9C0A0 1308 aa20.91■□□□□ 0.94
IFITM3-201ENST00000399808 ERVV-2B6SEH9 535 aa20.9■□□□□ 0.94
IFITM3-201ENST00000399808 EIF4A2Q14240 407 aaKnown RBP20.9■□□□□ 0.94
IFITM3-201ENST00000399808 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
IFITM3-201ENST00000399808 PLEKHG2Q9H7P9 1386 aa20.89■□□□□ 0.93
IFITM3-201ENST00000399808 FSTL1Q12841 308 aa20.89■□□□□ 0.93
IFITM3-201ENST00000399808 CDCA8Q53HL2 280 aa20.89■□□□□ 0.93
IFITM3-201ENST00000399808 PIM2Q9P1W9 311 aa20.89■□□□□ 0.93
IFITM3-201ENST00000399808 C16orf71Q8IYS4 520 aaPredicted RBP20.88■□□□□ 0.93
IFITM3-201ENST00000399808 RRAGCQ9HB90 399 aa20.88■□□□□ 0.93
IFITM3-201ENST00000399808 TNRC6CQ9HCJ0 1690 aaKnown RBP20.87■□□□□ 0.93
IFITM3-201ENST00000399808 SRP68Q9UHB9 627 aaKnown RBP20.87■□□□□ 0.93
IFITM3-201ENST00000399808 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
IFITM3-201ENST00000399808 DDR1Q08345 913 aa20.86■□□□□ 0.93
IFITM3-201ENST00000399808 FKBP8Q14318 412 aa20.86■□□□□ 0.93
IFITM3-201ENST00000399808 RNF181Q9P0P0 153 aa20.86■□□□□ 0.93
IFITM3-201ENST00000399808 ADAMTS7Q9UKP4 1686 aa20.86■□□□□ 0.93
IFITM3-201ENST00000399808 CCDC88AQ3V6T2 1871 aa20.86■□□□□ 0.93
IFITM3-201ENST00000399808 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
IFITM3-201ENST00000399808 DALRD3Q5D0E6 543 aaKnown RBP20.85■□□□□ 0.93
IFITM3-201ENST00000399808 TJP1Q07157 1748 aa20.84■□□□□ 0.93
IFITM3-201ENST00000399808 CHRNA5P30532 468 aa20.84■□□□□ 0.93
IFITM3-201ENST00000399808 PTCD1O75127 700 aaKnown RBP20.83■□□□□ 0.93
IFITM3-201ENST00000399808 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
IFITM3-201ENST00000399808 AFDNP55196 1824 aaKnown RBP20.83■□□□□ 0.92
IFITM3-201ENST00000399808 USP42Q9H9J4 1324 aaKnown RBP20.82■□□□□ 0.92
IFITM3-201ENST00000399808 HSP90AB1P08238 724 aaKnown RBP20.82■□□□□ 0.92
IFITM3-201ENST00000399808 CABP4P57796 275 aa20.82■□□□□ 0.92
IFITM3-201ENST00000399808 CAPN15O75808 1086 aa20.81■□□□□ 0.92
IFITM3-201ENST00000399808 TM4SF1P30408 202 aa20.81■□□□□ 0.92
IFITM3-201ENST00000399808 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
IFITM3-201ENST00000399808 PLEKHO1Q53GL0 409 aaPredicted RBP20.8■□□□□ 0.92
IFITM3-201ENST00000399808 ZNF530Q6P9A1 599 aaPredicted RBP20.8■□□□□ 0.92
IFITM3-201ENST00000399808 POLRMTO00411 1230 aaKnown RBP20.79■□□□□ 0.92
IFITM3-201ENST00000399808 PRELPP51888 382 aa20.79■□□□□ 0.92
IFITM3-201ENST00000399808 INTS5Q6P9B9 1019 aaKnown RBP20.79■□□□□ 0.92
IFITM3-201ENST00000399808 NFATC2IPQ8NCF5 419 aa20.79■□□□□ 0.92
IFITM3-201ENST00000399808 PCNTO95613 3336 aa20.79■□□□□ 0.92
IFITM3-201ENST00000399808 SCN11AQ9UI33 1791 aa20.78■□□□□ 0.92
IFITM3-201ENST00000399808 TNS4Q8IZW8 715 aa20.78■□□□□ 0.92
IFITM3-201ENST00000399808 SMC1BQ8NDV3 1235 aa20.78■□□□□ 0.92
IFITM3-201ENST00000399808 RASSF7Q02833 373 aa20.77■□□□□ 0.92
IFITM3-201ENST00000399808 MTHFSP49914 203 aa20.76■□□□□ 0.91
IFITM3-201ENST00000399808 DLEC1Q9Y238 1755 aa20.76■□□□□ 0.91
IFITM3-201ENST00000399808 NRXN2Q9P2S2 1712 aa20.75■□□□□ 0.91
IFITM3-201ENST00000399808 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
IFITM3-201ENST00000399808 AEBP1Q8IUX7 1158 aa20.75■□□□□ 0.91
IFITM3-201ENST00000399808 VIRMAQ69YN4 1812 aaKnown RBP20.74■□□□□ 0.91
IFITM3-201ENST00000399808 USPL1Q5W0Q7 1092 aa20.73■□□□□ 0.91
IFITM3-201ENST00000399808 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
IFITM3-201ENST00000399808 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
IFITM3-201ENST00000399808 DNAJC10Q8IXB1 793 aa20.72■□□□□ 0.91
IFITM3-201ENST00000399808 ZC3H4Q9UPT8 1303 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms