RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 PSMD1Q99460 953 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 NAPBQ9H115 298 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 CHMP5Q9NZZ3 219 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 KIAA1107Q9UPP5 1409 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 SKOR2Q2VWA4 1001 aaPredicted RBP16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
CACNA1C-211ENST00000399617 DEF6Q9H4E7 631 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 ATAD2Q6PL18 1390 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 NOL7Q9UMY1 257 aaKnown RBP16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 PLEKHH2Q8IVE3 1493 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 MYO1BO43795 1136 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 SERPINC1P01008 464 aa16.29■□□□□ 0.2
CACNA1C-211ENST00000399617 HAND2P61296 217 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 SAMM50Q9Y512 469 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 DAPK1P53355 1430 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 ZRANB1Q9UGI0 708 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 TSHZ3Q63HK5 1081 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 BLOC1S2Q6QNY1 142 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 ZCRB1Q8TBF4 217 aaKnown RBP16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 NEFHP12036 1026 aa16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 CASTP20810 708 aaKnown RBP16.28■□□□□ 0.2
CACNA1C-211ENST00000399617 FILIP1LQ4L180 1135 aa16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 NUCB2P80303 420 aa16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 ATF7IPQ6VMQ6 1270 aa16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 NAT10Q9H0A0 1025 aaKnown RBP16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 TNIP1Q15025 636 aa16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 MNS1Q8NEH6 495 aa16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 AKAP2Q9Y2D5 859 aa16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
CACNA1C-211ENST00000399617 NOM1Q5C9Z4 860 aaKnown RBP16.27■□□□□ 0.19
CACNA1C-211ENST00000399617 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.19
CACNA1C-211ENST00000399617 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
CACNA1C-211ENST00000399617 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
CACNA1C-211ENST00000399617 CUL5Q93034 780 aa16.26■□□□□ 0.19
CACNA1C-211ENST00000399617 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
CACNA1C-211ENST00000399617 NIP7Q9Y221 180 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1C-211ENST00000399617 FCHSD2O94868 740 aa16.26■□□□□ 0.19
CACNA1C-211ENST00000399617 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
CACNA1C-211ENST00000399617 GOLIM4O00461 696 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 NFKBIBQ15653 356 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 PPP4R3AQ6IN85 833 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 PPP1R42Q7Z4L9 355 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 GCC1Q96CN9 775 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
CACNA1C-211ENST00000399617 ZNF526Q8TF50 670 aaPredicted RBP16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 CCT2P78371 535 aaKnown RBP16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 FAM98CQ17RN3 349 aaKnown RBP16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 CHD1LQ86WJ1 897 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 HECW1Q76N89 1606 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 BMP2KQ9NSY1 1161 aaPredicted RBP16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 MMRN2Q9H8L6 949 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 CABP5Q9NP86 173 aa16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNA1C-211ENST00000399617 TNNT1P13805 278 aa16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 NOS1P29475 1434 aa16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 FAM13BQ9NYF5 915 aa16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 HELBQ8NG08 1087 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 SIRT1Q96EB6 747 aa16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 BRD4O60885 1362 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 SPTY2D1Q68D10 685 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 TNRQ92752 1358 aa16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 HFM1A2PYH4 1435 aa16.23■□□□□ 0.19
CACNA1C-211ENST00000399617 CTNNA3Q9UI47 895 aa16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 ANKRD30BQ9BXX2 1392 aa16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 CCDC83Q8IWF9 413 aa16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 CAMK4Q16566 473 aa16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 CWC25Q9NXE8 425 aaPredicted RBP16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 CCDC181Q5TID7 509 aa16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-211ENST00000399617 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
CACNA1C-211ENST00000399617 EHBP1L1Q8N3D4 1523 aa16.21■□□□□ 0.19
CACNA1C-211ENST00000399617 KLHL10Q6JEL2 608 aa16.21■□□□□ 0.19
CACNA1C-211ENST00000399617 DENND4BO75064 1496 aaPredicted RBP16.21■□□□□ 0.19
CACNA1C-211ENST00000399617 GNPATO15228 680 aa16.21■□□□□ 0.19
CACNA1C-211ENST00000399617 STIM1Q13586 685 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms