RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
ITSN1-207ENST00000399338 TMEM57Q8N5G2 664 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 MYOM1P52179 1685 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
ITSN1-207ENST00000399338 CUL4AQ13619 759 aa13.15□□□□□ -0.31
ITSN1-207ENST00000399338 CCDC27Q2M243 656 aa13.15□□□□□ -0.31
ITSN1-207ENST00000399338 PSD3Q9NYI0 1048 aa13.15□□□□□ -0.31
ITSN1-207ENST00000399338 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.31
ITSN1-207ENST00000399338 E2F4Q16254 413 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 SGSM3Q96HU1 749 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 TMX3Q96JJ7 454 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 NRBP1Q9UHY1 535 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-207ENST00000399338 NUP155O75694 1391 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 GOLIM4O00461 696 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
ITSN1-207ENST00000399338 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-207ENST00000399338 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
ITSN1-207ENST00000399338 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
ITSN1-207ENST00000399338 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
ITSN1-207ENST00000399338 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
ITSN1-207ENST00000399338 CEP89Q96ST8 783 aa13.13□□□□□ -0.31
ITSN1-207ENST00000399338 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-207ENST00000399338 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
ITSN1-207ENST00000399338 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
ITSN1-207ENST00000399338 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
ITSN1-207ENST00000399338 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 CACTINQ8WUQ7 758 aaKnown RBP13.12□□□□□ -0.31
ITSN1-207ENST00000399338 STK26Q9P289 416 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 A2MP01023 1474 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 RNF17Q9BXT8 1623 aaKnown RBP13.12□□□□□ -0.31
ITSN1-207ENST00000399338 INTS4Q96HW7 963 aaKnown RBP13.12□□□□□ -0.31
ITSN1-207ENST00000399338 NOS1P29475 1434 aa13.12□□□□□ -0.31
ITSN1-207ENST00000399338 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 UBE2HP62256 183 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-207ENST00000399338 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 L2HGDHQ9H9P8 463 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
ITSN1-207ENST00000399338 CPP00450 1065 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 ACTN2P35609 894 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 ZCCHC17Q9NP64 241 aaKnown RBP13.11□□□□□ -0.31
ITSN1-207ENST00000399338 PPRC1Q5VV67 1664 aaKnown RBP13.11□□□□□ -0.31
ITSN1-207ENST00000399338 NPHP1O15259 732 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 PPM1EQ8WY54 764 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 AK7Q96M32 723 aa13.11□□□□□ -0.31
ITSN1-207ENST00000399338 EIF3CLB5ME19 914 aaKnown RBP13.1□□□□□ -0.31
ITSN1-207ENST00000399338 OAS2P29728 719 aaKnown RBP13.1□□□□□ -0.31
ITSN1-207ENST00000399338 MMS22LQ6ZRQ5 1243 aa13.1□□□□□ -0.31
ITSN1-207ENST00000399338 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
ITSN1-207ENST00000399338 EIF3CQ99613 913 aaKnown RBP13.1□□□□□ -0.31
ITSN1-207ENST00000399338 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
ITSN1-207ENST00000399338 MAP2K2P36507 400 aa13.1□□□□□ -0.31
ITSN1-207ENST00000399338 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-207ENST00000399338 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-207ENST00000399338 FAM200AQ8TCP9 573 aa13.1□□□□□ -0.31
ITSN1-207ENST00000399338 NUP153P49790 1475 aaKnown RBP13.09□□□□□ -0.31
ITSN1-207ENST00000399338 NUP160Q12769 1436 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 ELP1O95163 1332 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 ZNF75DP51815 510 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 CCDC93Q567U6 631 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
ITSN1-207ENST00000399338 SH3BP1Q9Y3L3 701 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 PPP1R12AO14974 1030 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-207ENST00000399338 IVLP07476 585 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
ITSN1-207ENST00000399338 ZSCAN16Q9H4T2 348 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-207ENST00000399338 LRRN4CLQ8ND94 238 aa13.08□□□□□ -0.31
ITSN1-207ENST00000399338 KCND1Q9NSA2 647 aa13.08□□□□□ -0.31
ITSN1-207ENST00000399338 MED14O60244 1454 aa13.08□□□□□ -0.31
ITSN1-207ENST00000399338 WDR33Q9C0J8 1336 aaKnown RBP13.08□□□□□ -0.32
ITSN1-207ENST00000399338 MCM2P49736 904 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 CORO7P57737 925 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 TRDNQ13061 729 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 RPAINQ86UA6 219 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 PLEKHM2Q8IWE5 1019 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 CNPY2Q9Y2B0 182 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
ITSN1-207ENST00000399338 CCDC192P0DO97 292 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 DRC7Q8IY82 874 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
ITSN1-207ENST00000399338 RPS6KA5O75582 802 aa13.07□□□□□ -0.32
ITSN1-207ENST00000399338 SASH3O75995 380 aa13.07□□□□□ -0.32
ITSN1-207ENST00000399338 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
ITSN1-207ENST00000399338 ARHGAP29Q52LW3 1261 aa13.07□□□□□ -0.32
ITSN1-207ENST00000399338 TTC22Q5TAA0 569 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms